BLASTX nr result

ID: Panax21_contig00008502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00008502
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitoch...    84   4e-14
ref|XP_002510728.1| RNA binding protein, putative [Ricinus commu...    83   7e-14
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...    82   1e-13
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glyc...    82   1e-13
gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-184...    82   2e-13

>ref|XP_003527630.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Glycine
           max]
          Length = 293

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +3

Query: 468 VTFRDPESAKRACIDPTPIIDGRRANCNLASLGRPRPALPFG 593
           VTFRDPE+A+RAC DPTP+IDGRRANCNLASLGRPRP LP+G
Sbjct: 78  VTFRDPEAARRACADPTPVIDGRRANCNLASLGRPRPPLPYG 119


>ref|XP_002510728.1| RNA binding protein, putative [Ricinus communis]
           gi|223551429|gb|EEF52915.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 325

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +3

Query: 468 VTFRDPESAKRACIDPTPIIDGRRANCNLASLGRPRPALPFG 593
           VTFR+PE+AKRAC DPTPIIDGRRANCNLASLGRPRP +P+G
Sbjct: 55  VTFREPEAAKRACADPTPIIDGRRANCNLASLGRPRPPMPYG 96


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
           RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus]
          Length = 286

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +3

Query: 468 VTFRDPESAKRACIDPTPIIDGRRANCNLASLGRPRPALPFG 593
           VTFRDPESA+RAC DPTPIIDGRRANCNLASLGRPRP L +G
Sbjct: 78  VTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYG 119


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-like [Glycine max]
          Length = 286

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 35/42 (83%), Positives = 40/42 (95%)
 Frame = +3

Query: 468 VTFRDPESAKRACIDPTPIIDGRRANCNLASLGRPRPALPFG 593
           VTFRDPE+A+RAC DP+P+IDGRRANCNLASLGRPRP LP+G
Sbjct: 78  VTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPLPYG 119


>gb|AAF16655.1|AC012394_4 putative RNA-binding protein; 16955-18423 [Arabidopsis thaliana]
           gi|12323977|gb|AAG51948.1|AC015450_9 putative
           RNA-binding protein; 24808-23340 [Arabidopsis thaliana]
          Length = 279

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +3

Query: 468 VTFRDPESAKRACIDPTPIIDGRRANCNLASLGRPRPALPF 590
           VTFRDPE+A+RAC DPTPIIDGRRANCNLASLGRPRP LP+
Sbjct: 70  VTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPY 110


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