BLASTX nr result

ID: Panax21_contig00007496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007496
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   148   4e-34
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   140   1e-31
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25

>ref|XP_002270546.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g02650, mitochondrial-like [Vitis vinifera]
          Length = 509

 Score =  148 bits (374), Expect = 4e-34
 Identities = 66/99 (66%), Positives = 84/99 (84%)
 Frame = -2

Query: 301 GEGEAGFEVFNKFGEFGCVPNEDSFYFTIEALCRRSIFHWAGSVCENMVNAGNLPNSQKI 122
           G+G+AG EVFN FGE+GC PN DS+YFTIEALCRRSIF WA SVCE M+NA +LP+S+K+
Sbjct: 237 GKGKAGLEVFNAFGEYGCEPNADSYYFTIEALCRRSIFDWALSVCEKMLNASSLPDSEKV 296

Query: 121 GKIISYMCKGQKAKDAHFVYLSAKKMDRYPPRSSVNFLI 5
             IIS+ CKG+K KDA+ VYL AK+ ++YPP+++VNFLI
Sbjct: 297 WNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLI 335


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/99 (63%), Positives = 82/99 (82%)
 Frame = -2

Query: 301 GEGEAGFEVFNKFGEFGCVPNEDSFYFTIEALCRRSIFHWAGSVCENMVNAGNLPNSQKI 122
           G+G+A FEVFNKFG+FGCVP+ +++++TIEALCRRSIF WA SV E M+ A  LP+++KI
Sbjct: 256 GKGKAAFEVFNKFGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKI 315

Query: 121 GKIISYMCKGQKAKDAHFVYLSAKKMDRYPPRSSVNFLI 5
           GKII + CKG KA DA+ VYL AK+ ++YPP+ SVNFLI
Sbjct: 316 GKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLI 354


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/99 (57%), Positives = 77/99 (77%)
 Frame = -2

Query: 301 GEGEAGFEVFNKFGEFGCVPNEDSFYFTIEALCRRSIFHWAGSVCENMVNAGNLPNSQKI 122
           G+G+A  EVF+K  +FGCVP+ +++Y+TIEALCRRS + WA  VCE M++ G LP+S+KI
Sbjct: 148 GKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKI 207

Query: 121 GKIISYMCKGQKAKDAHFVYLSAKKMDRYPPRSSVNFLI 5
           GKII + CKG KAKDAH VYL AK+  + PP+ ++ FLI
Sbjct: 208 GKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLI 246


>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356556346|ref|XP_003546487.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 538

 Score =  118 bits (296), Expect = 4e-25
 Identities = 53/99 (53%), Positives = 74/99 (74%)
 Frame = -2

Query: 301 GEGEAGFEVFNKFGEFGCVPNEDSFYFTIEALCRRSIFHWAGSVCENMVNAGNLPNSQKI 122
           G+G+A  EVFNKF  F CVP+ D++YFTIEALCRR    WA  VC+ MV+A  LP+ +K+
Sbjct: 209 GKGKAALEVFNKFEAFHCVPDADTYYFTIEALCRRRALDWACGVCQKMVDAQILPDGEKV 268

Query: 121 GKIISYMCKGQKAKDAHFVYLSAKKMDRYPPRSSVNFLI 5
           G I+S++CKG+KAK+AH VY+ A +  + PP + V+FL+
Sbjct: 269 GAILSWLCKGKKAKEAHGVYVVATEKGKQPPVNVVSFLV 307


>ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Glycine max]
          Length = 539

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/98 (53%), Positives = 75/98 (76%)
 Frame = -2

Query: 298 EGEAGFEVFNKFGEFGCVPNEDSFYFTIEALCRRSIFHWAGSVCENMVNAGNLPNSQKIG 119
           +G+A  EVF+KF  F CVP+ D++YFTIEALCRR  F WA  VC+ MV+A  LP+++K+G
Sbjct: 211 KGKAALEVFDKFEAFHCVPDADTYYFTIEALCRRRAFDWACGVCQKMVDARTLPDAEKVG 270

Query: 118 KIISYMCKGQKAKDAHFVYLSAKKMDRYPPRSSVNFLI 5
            I+S++CKG+KAK+AH VY+ A +  + PP + V+FL+
Sbjct: 271 AILSWLCKGKKAKEAHGVYVVATEKGKLPPVNVVSFLV 308


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