BLASTX nr result
ID: Panax21_contig00007495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00007495
(1296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,... 436 e-120
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2... 434 e-119
emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera] 427 e-117
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi... 409 e-111
ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containi... 407 e-111
>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 436 bits (1121), Expect = e-120
Identities = 211/313 (67%), Positives = 261/313 (83%)
Frame = -2
Query: 1247 GEGEAGFEVFNKFGEFGCVPNEESFYFTIEALCRRSIFHWAGSVCENMVNAGKLPNSQKI 1068
G+G+A FEVFNKFG+FGCVP+ E++++TIEALCRRSIF WA SV E M+ A LP+++KI
Sbjct: 256 GKGKAAFEVFNKFGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKI 315
Query: 1067 GKIISYMCKGQKAKDAHSVYLSAKKMDRYPPRSSVYFLICSLSREDANVHLALEMLEDIS 888
GKII + CKG KA DA+ VYL AK+ ++YPP+ SV FLI L +++ V LALEML+ S
Sbjct: 316 GKIICWFCKGDKANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQKNETVKLALEMLDAFS 375
Query: 887 KEERKYAIKLFSSVIRGLCRIKDVEKAKVLLFNMIEAGPPPGNDIFNSIINSLSKAGEMG 708
+RKYAIK FSSVIR LCRIKD++ AK+LL M++ GPPPGN +FNSIIN SK G+M
Sbjct: 376 GPKRKYAIKPFSSVIRALCRIKDLDGAKMLLSKMVDEGPPPGNAVFNSIINGYSKCGDMK 435
Query: 707 EALKIMKVMESRGLRPDVYTYSVIMSGYTKGGEMEEACKVLAEAKKKHPKLSPVTYHTLI 528
EA+K+ ++M RGL+PD++TY+VIMSGY GG+MEEACKVL+EAKKKH KLSPV YHT+I
Sbjct: 436 EAIKMKQLMVRRGLKPDLFTYAVIMSGYASGGQMEEACKVLSEAKKKHSKLSPVMYHTVI 495
Query: 527 RGYCKLENFDKALELLSEMKQYGVQPNADEYNKLIQSLCLKALDWETAEKLMREMEDNDL 348
RGYCKLE FDKAL+LL+EMK +GVQ NADEYNKLIQSLCLKALDWE AEKL+ +M+++ L
Sbjct: 496 RGYCKLEQFDKALDLLAEMKTFGVQANADEYNKLIQSLCLKALDWERAEKLLEKMKEDGL 555
Query: 347 HLNGITKGLIRAV 309
HLNGIT+GLIRAV
Sbjct: 556 HLNGITRGLIRAV 568
>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
predicted protein [Populus trichocarpa]
Length = 476
Score = 434 bits (1117), Expect = e-119
Identities = 208/313 (66%), Positives = 257/313 (82%)
Frame = -2
Query: 1247 GEGEAGFEVFNKFGEFGCVPNEESFYFTIEALCRRSIFHWAGSVCENMVNAGKLPNSQKI 1068
G+G+A EVF+K +FGCVP+ E++Y+TIEALCRRS + WA VCE M++ G LP+S+KI
Sbjct: 148 GKGKAALEVFDKSKDFGCVPDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKI 207
Query: 1067 GKIISYMCKGQKAKDAHSVYLSAKKMDRYPPRSSVYFLICSLSREDANVHLALEMLEDIS 888
GKII + CKG KAKDAH VYL AK+ + PP+ ++YFLI SL R+D V+LALEML D
Sbjct: 208 GKIICWFCKGSKAKDAHKVYLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLALEMLNDFE 267
Query: 887 KEERKYAIKLFSSVIRGLCRIKDVEKAKVLLFNMIEAGPPPGNDIFNSIINSLSKAGEMG 708
E +KYAIK FSSVIRGLCRIKD++ AK LL MI GPPPGN +FN++I+ K G+M
Sbjct: 268 GEAKKYAIKPFSSVIRGLCRIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMK 327
Query: 707 EALKIMKVMESRGLRPDVYTYSVIMSGYTKGGEMEEACKVLAEAKKKHPKLSPVTYHTLI 528
EA++IMK+MESRGL+PDVYTY+VI+SGY+ GG+MEEAC +L+EAKKKH KLSPVTYH LI
Sbjct: 328 EAIEIMKLMESRGLKPDVYTYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALI 387
Query: 527 RGYCKLENFDKALELLSEMKQYGVQPNADEYNKLIQSLCLKALDWETAEKLMREMEDNDL 348
RGYCKL+ FDKALELL+EM+++GVQPNADEYNKLIQSLCLK+LDW TAEKL EM++ L
Sbjct: 388 RGYCKLDQFDKALELLAEMEKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKGL 447
Query: 347 HLNGITKGLIRAV 309
+LN IT+ LI AV
Sbjct: 448 YLNSITRSLITAV 460
>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
Length = 549
Score = 427 bits (1099), Expect = e-117
Identities = 211/313 (67%), Positives = 252/313 (80%)
Frame = -2
Query: 1247 GEGEAGFEVFNKFGEFGCVPNEESFYFTIEALCRRSIFHWAGSVCENMVNAGKLPNSQKI 1068
G+G+AG EVFN FGE+G RSIF WA SVCE M+NA LP+S+K+
Sbjct: 237 GKGKAGLEVFNAFGEYG-----------------RSIFDWALSVCEKMLNASSLPDSEKV 279
Query: 1067 GKIISYMCKGQKAKDAHSVYLSAKKMDRYPPRSSVYFLICSLSREDANVHLALEMLEDIS 888
IIS+ CKG+K KDA+ VYL AK+ ++YPP+++V FLI SL RED + +A+EML+D S
Sbjct: 280 WNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEMLDDFS 339
Query: 887 KEERKYAIKLFSSVIRGLCRIKDVEKAKVLLFNMIEAGPPPGNDIFNSIINSLSKAGEMG 708
EE KYAIK +++VIRGLCR KDV+ AK LL MIEAGPPPGN +FN +IN LSKAGEM
Sbjct: 340 GEECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSKAGEME 399
Query: 707 EALKIMKVMESRGLRPDVYTYSVIMSGYTKGGEMEEACKVLAEAKKKHPKLSPVTYHTLI 528
EA+K+MK+ME+RGL+PDVYTYSVIMSGY GG MEEAC+VL+EAK+ H KLSPVTYHTLI
Sbjct: 400 EAMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVTYHTLI 459
Query: 527 RGYCKLENFDKALELLSEMKQYGVQPNADEYNKLIQSLCLKALDWETAEKLMREMEDNDL 348
RGYCKLE FDKA+ELL EMK++GVQPN DEYNKLIQSLCLKALDW+TAEKL+ EM+ N L
Sbjct: 460 RGYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEEMKQNGL 519
Query: 347 HLNGITKGLIRAV 309
HLNGIT+GLIRAV
Sbjct: 520 HLNGITRGLIRAV 532
>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 1 [Glycine max]
gi|356556346|ref|XP_003546487.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like isoform 2 [Glycine max]
Length = 538
Score = 409 bits (1050), Expect = e-111
Identities = 196/313 (62%), Positives = 249/313 (79%)
Frame = -2
Query: 1247 GEGEAGFEVFNKFGEFGCVPNEESFYFTIEALCRRSIFHWAGSVCENMVNAGKLPNSQKI 1068
G+G+A EVFNKF F CVP+ +++YFTIEALCRR WA VC+ MV+A LP+ +K+
Sbjct: 209 GKGKAALEVFNKFEAFHCVPDADTYYFTIEALCRRRALDWACGVCQKMVDAQILPDGEKV 268
Query: 1067 GKIISYMCKGQKAKDAHSVYLSAKKMDRYPPRSSVYFLICSLSREDANVHLALEMLEDIS 888
G I+S++CKG+KAK+AH VY+ A + + PP + V FL+ L ED V ALEMLEDI
Sbjct: 269 GAILSWLCKGKKAKEAHGVYVVATEKGKQPPVNVVSFLVVKLCGEDETVKFALEMLEDIP 328
Query: 887 KEERKYAIKLFSSVIRGLCRIKDVEKAKVLLFNMIEAGPPPGNDIFNSIINSLSKAGEMG 708
+E+R+ AIK F +V+R LCRIK+V+KAK L+ MIE GPPPGN +FN ++ + SKAGEMG
Sbjct: 329 EEKRERAIKPFLAVVRALCRIKEVDKAKELVLKMIEDGPPPGNAVFNFVVTAYSKAGEMG 388
Query: 707 EALKIMKVMESRGLRPDVYTYSVIMSGYTKGGEMEEACKVLAEAKKKHPKLSPVTYHTLI 528
+A+++M++MESRGLRPDVYTY+V+ S Y+ GGEMEEA K+LAE KKKH KL PV +HTLI
Sbjct: 389 KAVEMMRLMESRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEVKKKHAKLGPVMFHTLI 448
Query: 527 RGYCKLENFDKALELLSEMKQYGVQPNADEYNKLIQSLCLKALDWETAEKLMREMEDNDL 348
RGYCKLE FD+AL+LL+EMK YGV P+ DEY+KLIQSLCLKALDWE AEKL EM+++ L
Sbjct: 449 RGYCKLEQFDEALKLLAEMKDYGVHPSVDEYDKLIQSLCLKALDWEMAEKLHEEMKESGL 508
Query: 347 HLNGITKGLIRAV 309
HL GIT+GLIRAV
Sbjct: 509 HLKGITRGLIRAV 521
>ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
mitochondrial-like [Glycine max]
Length = 539
Score = 407 bits (1047), Expect = e-111
Identities = 195/312 (62%), Positives = 252/312 (80%)
Frame = -2
Query: 1244 EGEAGFEVFNKFGEFGCVPNEESFYFTIEALCRRSIFHWAGSVCENMVNAGKLPNSQKIG 1065
+G+A EVF+KF F CVP+ +++YFTIEALCRR F WA VC+ MV+A LP+++K+G
Sbjct: 211 KGKAALEVFDKFEAFHCVPDADTYYFTIEALCRRRAFDWACGVCQKMVDARTLPDAEKVG 270
Query: 1064 KIISYMCKGQKAKDAHSVYLSAKKMDRYPPRSSVYFLICSLSREDANVHLALEMLEDISK 885
I+S++CKG+KAK+AH VY+ A + + PP + V FL+ L ED V ALE+LEDI +
Sbjct: 271 AILSWLCKGKKAKEAHGVYVVATEKGKLPPVNVVSFLVLKLCGEDETVKSALEILEDIPE 330
Query: 884 EERKYAIKLFSSVIRGLCRIKDVEKAKVLLFNMIEAGPPPGNDIFNSIINSLSKAGEMGE 705
E+R+ AIK F +V+R LCRIK+V+KAK LL MIE GPPPGN +FN ++ + SKAGEMG+
Sbjct: 331 EKRERAIKPFLAVVRALCRIKEVDKAKELLLKMIENGPPPGNAVFNFVVTAYSKAGEMGK 390
Query: 704 ALKIMKVMESRGLRPDVYTYSVIMSGYTKGGEMEEACKVLAEAKKKHPKLSPVTYHTLIR 525
A+++M++MESRGLRPDVYTY+V+ S Y+ GGEMEEA K+LAEAKKKH KL PV +HTLIR
Sbjct: 391 AVEMMRLMESRGLRPDVYTYTVLASAYSNGGEMEEAQKILAEAKKKHVKLGPVMFHTLIR 450
Query: 524 GYCKLENFDKALELLSEMKQYGVQPNADEYNKLIQSLCLKALDWETAEKLMREMEDNDLH 345
GYCKLE FD+AL+LL+EMK YGV+P+ DEY+KLIQSLCLKALDW+ AEKL EM+++ LH
Sbjct: 451 GYCKLEQFDEALKLLAEMKDYGVRPSVDEYDKLIQSLCLKALDWKMAEKLQEEMKESGLH 510
Query: 344 LNGITKGLIRAV 309
L GIT+GLIRAV
Sbjct: 511 LKGITRGLIRAV 522