BLASTX nr result

ID: Panax21_contig00007477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007477
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                   124   8e-27
dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                   124   8e-27
sp|P25010.1|CCNAL_DAUCA RecName: Full=G2/mitotic-specific cyclin...   122   4e-26
gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]                  121   8e-26
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]             119   2e-25

>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score =  124 bits (312), Expect = 8e-27
 Identities = 64/88 (72%), Positives = 73/88 (82%), Gaps = 6/88 (6%)
 Frame = +1

Query: 157 FISSSQMETKRRPLPDYIEKVQKDVP------LVDWLVEVSVEYKLLSDTLYLAVSYIDR 318
           ++   +METKRRPLPDY++KVQKDV       L+DWLVEV+ EYKLL DTLYL VSYIDR
Sbjct: 111 YLHKMEMETKRRPLPDYLDKVQKDVTANMRGVLIDWLVEVAEEYKLLPDTLYLTVSYIDR 170

Query: 319 YLSMNAHNRQKLQLLGVSSMLIALKYEE 402
           +LSMNA +RQKLQLLGVSSMLIA KYEE
Sbjct: 171 FLSMNALSRQKLQLLGVSSMLIASKYEE 198


>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score =  124 bits (312), Expect = 8e-27
 Identities = 64/88 (72%), Positives = 73/88 (82%), Gaps = 6/88 (6%)
 Frame = +1

Query: 157 FISSSQMETKRRPLPDYIEKVQKDVP------LVDWLVEVSVEYKLLSDTLYLAVSYIDR 318
           ++   +METKRRPLPDY++KVQKDV       L+DWLVEV+ EYKLL DTLYL VSYIDR
Sbjct: 111 YLHKMEMETKRRPLPDYLDKVQKDVTANMRGVLIDWLVEVAEEYKLLPDTLYLTVSYIDR 170

Query: 319 YLSMNAHNRQKLQLLGVSSMLIALKYEE 402
           +LSMNA +RQKLQLLGVSSMLIA KYEE
Sbjct: 171 FLSMNALSRQKLQLLGVSSMLIASKYEE 198


>sp|P25010.1|CCNAL_DAUCA RecName: Full=G2/mitotic-specific cyclin C13-1; AltName:
           Full=A-like cyclin gi|829260|emb|CAA44631.1| mitotic
           cyclin [Daucus carota]
          Length = 341

 Score =  122 bits (306), Expect = 4e-26
 Identities = 63/93 (67%), Positives = 75/93 (80%), Gaps = 6/93 (6%)
 Frame = +1

Query: 157 FISSSQMETKRRPLPDYIEKVQKDVP------LVDWLVEVSVEYKLLSDTLYLAVSYIDR 318
           ++   +METKRRP+ +YIE+VQKDV       LVDWLVEVS+EYKLL +TLYLA+SY+DR
Sbjct: 81  YLKQMEMETKRRPMMNYIEQVQKDVTSNMRGVLVDWLVEVSLEYKLLPETLYLAISYVDR 140

Query: 319 YLSMNAHNRQKLQLLGVSSMLIALKYEERKKKD 417
           YLS+N  NRQKLQLLGVSS LIA KYEE K K+
Sbjct: 141 YLSVNVLNRQKLQLLGVSSFLIASKYEEIKPKN 173


>gb|AFK65510.1| cyclin A, partial [Dimocarpus longan]
          Length = 382

 Score =  121 bits (303), Expect = 8e-26
 Identities = 64/88 (72%), Positives = 70/88 (79%), Gaps = 6/88 (6%)
 Frame = +1

Query: 157 FISSSQMETKRRPLPDYIEKVQKDVP------LVDWLVEVSVEYKLLSDTLYLAVSYIDR 318
           ++   ++E KRRPLPDYIEKVQKDV       LVDWLVEVS EYKL SDTLYL VSYID 
Sbjct: 104 YLRDMEVEPKRRPLPDYIEKVQKDVSANMRGILVDWLVEVSEEYKLFSDTLYLTVSYIDG 163

Query: 319 YLSMNAHNRQKLQLLGVSSMLIALKYEE 402
           +LS+N  NRQKLQLLGVSSMLIA KYEE
Sbjct: 164 FLSLNVINRQKLQLLGVSSMLIASKYEE 191


>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 384

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/88 (70%), Positives = 71/88 (80%), Gaps = 6/88 (6%)
 Frame = +1

Query: 157 FISSSQMETKRRPLPDYIEKVQKDVP------LVDWLVEVSVEYKLLSDTLYLAVSYIDR 318
           ++   ++E KRRPLPDY+EKVQKD+       LVDWLVEV+ EYKLLSDTLYLAVSYIDR
Sbjct: 120 YLRKMEIEEKRRPLPDYLEKVQKDLSPNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDR 179

Query: 319 YLSMNAHNRQKLQLLGVSSMLIALKYEE 402
           +LS N   RQKLQLLGVSSMLI+ KYEE
Sbjct: 180 FLSTNVITRQKLQLLGVSSMLISAKYEE 207


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