BLASTX nr result

ID: Panax21_contig00007476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007476
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicag...   152   3e-35
ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group] g...   150   1e-34
gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japo...   150   1e-34
ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   148   4e-34
emb|CBI32154.3| unnamed protein product [Vitis vinifera]              148   4e-34

>ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355490673|gb|AES71876.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 613

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/108 (71%), Positives = 84/108 (77%)
 Frame = +3

Query: 3   GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEA 182
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK GLATAFFNENNTSMARSL +LMQEA
Sbjct: 467 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEA 526

Query: 183 NQEVPAWLARFAARASYXXXXXXXXXXXXXXXXXXXXENNPFNRGGAD 326
           NQEVPAWL+RFAAR+S+                    E + F+RGG+D
Sbjct: 527 NQEVPAWLSRFAARSSFGGGKNRRSGGGRFGGRDFRREGS-FSRGGSD 573


>ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group]
           gi|122206897|sp|Q2R1M8.1|RH52C_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 52C
           gi|77551918|gb|ABA94715.1| DEAD-box protein 3,
           X-chromosomal, putative, expressed [Oryza sativa
           Japonica Group] gi|113645443|dbj|BAF28584.1|
           Os11g0599500 [Oryza sativa Japonica Group]
          Length = 623

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +3

Query: 3   GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEA 182
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENN+SMARSL+ELMQE+
Sbjct: 479 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQES 538

Query: 183 NQEVPAWLARFAARASY 233
           NQEVPAWL+R+AAR SY
Sbjct: 539 NQEVPAWLSRYAARPSY 555


>gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japonica Group]
          Length = 541

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +3

Query: 3   GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEA 182
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENN+SMARSL+ELMQE+
Sbjct: 397 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQES 456

Query: 183 NQEVPAWLARFAARASY 233
           NQEVPAWL+R+AAR SY
Sbjct: 457 NQEVPAWLSRYAARPSY 473


>ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 617

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/106 (67%), Positives = 81/106 (76%)
 Frame = +3

Query: 3   GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEA 182
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENN+S+AR L+ELMQE+
Sbjct: 476 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARGLAELMQES 535

Query: 183 NQEVPAWLARFAARASYXXXXXXXXXXXXXXXXXXXXENNPFNRGG 320
           NQEVPAWL+R+AAR+SY                     +  FNR G
Sbjct: 536 NQEVPAWLSRYAARSSYGGGGRNRRSGGGRFGGRDFRRDTSFNRSG 581


>emb|CBI32154.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  148 bits (374), Expect = 4e-34
 Identities = 72/106 (67%), Positives = 81/106 (76%)
 Frame = +3

Query: 3   GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNTSMARSLSELMQEA 182
           GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK+GLATAFFNENN+S+AR L+ELMQE+
Sbjct: 260 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARGLAELMQES 319

Query: 183 NQEVPAWLARFAARASYXXXXXXXXXXXXXXXXXXXXENNPFNRGG 320
           NQEVPAWL+R+AAR+SY                     +  FNR G
Sbjct: 320 NQEVPAWLSRYAARSSYGGGGRNRRSGGGRFGGRDFRRDTSFNRSG 365


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