BLASTX nr result

ID: Panax21_contig00007475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007475
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274358.1| PREDICTED: mRNA decapping complex subunit 2 ...    83   1e-27
emb|CAN75444.1| hypothetical protein VITISV_019659 [Vitis vinifera]    83   1e-27
ref|XP_004149909.1| PREDICTED: mRNA-decapping enzyme subunit 2-l...    81   5e-27
ref|XP_002311091.1| predicted protein [Populus trichocarpa] gi|2...    80   7e-26
gb|ABK93261.1| unknown [Populus trichocarpa]                           79   1e-24

>ref|XP_002274358.1| PREDICTED: mRNA decapping complex subunit 2 [Vitis vinifera]
           gi|296086018|emb|CBI31459.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = -1

Query: 741 EIAWHRLDELQPASNDVISRGITGLKLYMVSPFLASLKAWISAHQP 604
           EI+WHRLD+LQP S DVISRG++G+KLYMV+PFL SLK+WISAHQP
Sbjct: 204 EISWHRLDDLQPVSGDVISRGLSGVKLYMVAPFLLSLKSWISAHQP 249



 Score = 66.2 bits (160), Expect(2) = 1e-27
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = -3

Query: 571 GMSVWKAKNSSTGSSNMVITESPIIIKPKTDA-PSVSGPGRSFKNFQFDRASIFRAMETV 395
           G  VWKAKNSSTGSS M+        KP +D  P  +GPGRSF+NF+FD  +I +AM++ 
Sbjct: 261 GFCVWKAKNSSTGSSTMIAENQAT--KPVSDVHPPDTGPGRSFRNFRFDTTAILKAMDSA 318

Query: 394 FSA 386
           FSA
Sbjct: 319 FSA 321


>emb|CAN75444.1| hypothetical protein VITISV_019659 [Vitis vinifera]
          Length = 318

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = -1

Query: 741 EIAWHRLDELQPASNDVISRGITGLKLYMVSPFLASLKAWISAHQP 604
           EI+WHRLD+LQP S DVISRG++G+KLYMV+PFL SLK+WISAHQP
Sbjct: 201 EISWHRLDDLQPVSGDVISRGLSGVKLYMVAPFLLSLKSWISAHQP 246



 Score = 66.2 bits (160), Expect(2) = 1e-27
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
 Frame = -3

Query: 571 GMSVWKAKNSSTGSSNMVITESPIIIKPKTDA-PSVSGPGRSFKNFQFDRASIFRAMETV 395
           G  VWKAKNSSTGSS M+        KP +D  P  +GPGRSF+NF+FD  +I +AM++ 
Sbjct: 258 GFCVWKAKNSSTGSSTMIAENQAT--KPVSDVHPPDTGPGRSFRNFRFDTTAILKAMDSA 315

Query: 394 FSA 386
           FSA
Sbjct: 316 FSA 318


>ref|XP_004149909.1| PREDICTED: mRNA-decapping enzyme subunit 2-like [Cucumis sativus]
           gi|449490388|ref|XP_004158591.1| PREDICTED:
           mRNA-decapping enzyme subunit 2-like [Cucumis sativus]
          Length = 319

 Score = 81.3 bits (199), Expect(2) = 5e-27
 Identities = 35/52 (67%), Positives = 45/52 (86%)
 Frame = -1

Query: 741 EIAWHRLDELQPASNDVISRGITGLKLYMVSPFLASLKAWISAHQPLSHQNP 586
           EIAWHRLD+L+PAS++VISRG++GLKLYM++PFLASL++WI  H P    NP
Sbjct: 205 EIAWHRLDDLEPASDNVISRGMSGLKLYMIAPFLASLRSWILTHHPPVRPNP 256



 Score = 66.2 bits (160), Expect(2) = 5e-27
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = -3

Query: 571 GMSVWKAKNSSTGSSNMVITESPIIIKPKTDAPSVSGPGRSFKNFQFDRASIFRAMETVF 392
           G++VWKAKNSS GSS+ +I ES I    K +    +GPG+SF+NF+FD ASI ++ME  F
Sbjct: 262 GLTVWKAKNSSIGSSSTIIMESQI---SKAEVEVDTGPGKSFRNFKFDTASILQSMERAF 318

Query: 391 S 389
           S
Sbjct: 319 S 319


>ref|XP_002311091.1| predicted protein [Populus trichocarpa] gi|222850911|gb|EEE88458.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 79.7 bits (195), Expect(2) = 7e-26
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = -1

Query: 741 EIAWHRLDELQPASNDVISRGITGLKLYMVSPFLASLKAWISAHQ 607
           EIAW RLD+LQPAS +VISR ITGLKLYMV+PFLASLK+WIS+HQ
Sbjct: 205 EIAWQRLDDLQPASYEVISRSITGLKLYMVAPFLASLKSWISSHQ 249



 Score = 63.9 bits (154), Expect(2) = 7e-26
 Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = -3

Query: 568 MSVWKAKNSSTGSSNMVITESPIIIKPKTDA-PSVSGPGRSFKNFQFDRASIFRAMETVF 392
           M VWKA+N+S GSS +++     + KP +DA P   GPG+SF+NF+FD ASI RAME+ F
Sbjct: 263 MCVWKARNNSIGSSTVIMESH--LNKPGSDAHPPDMGPGKSFRNFRFDTASILRAMESGF 320

Query: 391 SA 386
           SA
Sbjct: 321 SA 322


>gb|ABK93261.1| unknown [Populus trichocarpa]
          Length = 322

 Score = 78.6 bits (192), Expect(2) = 1e-24
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = -1

Query: 741 EIAWHRLDELQPASNDVISRGITGLKLYMVSPFLASLKAWISAHQPLSHQNP 586
           EIAW RLDELQ AS++VISR ITGLKLYMV+PFL SLK+WI +HQP +   P
Sbjct: 205 EIAWQRLDELQSASDEVISRSITGLKLYMVAPFLVSLKSWILSHQPPAAPRP 256



 Score = 60.8 bits (146), Expect(2) = 1e-24
 Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
 Frame = -3

Query: 562 VWKAKNSSTGSSNMVITESPIIIKPKTDA-PSVSGPGRSFKNFQFDRASIFRAMETVFSA 386
           VWKAKN+S GS   VITES +  KP  DA P   GPG+SF+NF+FD A+I +AME+ FSA
Sbjct: 265 VWKAKNTSLGSGT-VITESHLT-KPVFDAHPLDMGPGKSFRNFRFDTAAILQAMESGFSA 322


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