BLASTX nr result

ID: Panax21_contig00007474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007474
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative ...   151   6e-35
ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
gb|ABK93558.1| unknown [Populus trichocarpa]                          150   1e-34
ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleo...   150   1e-34
ref|XP_002322820.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
           gi|223530136|gb|EEF32048.1| small nuclear
           ribonucleoprotein G, putative [Ricinus communis]
          Length = 80

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/78 (93%), Positives = 78/78 (100%)
 Frame = -3

Query: 342 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMV 163
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 162 VVRGNSVVTVEALEPVSR 109
           V+RGNSVVTVEALEPV+R
Sbjct: 61  VIRGNSVVTVEALEPVNR 78


>ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|222854442|gb|EEE91989.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/78 (93%), Positives = 78/78 (100%)
 Frame = -3

Query: 342 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMV 163
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 162 VVRGNSVVTVEALEPVSR 109
           V+RGNSVVTVEALEPV+R
Sbjct: 61  VIRGNSVVTVEALEPVNR 78


>gb|ABK93558.1| unknown [Populus trichocarpa]
          Length = 80

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/78 (93%), Positives = 78/78 (100%)
 Frame = -3

Query: 342 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMV 163
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 162 VVRGNSVVTVEALEPVSR 109
           V+RGNSVVTVEALEPV+R
Sbjct: 61  VLRGNSVVTVEALEPVNR 78


>ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
           vinifera] gi|297740131|emb|CBI30313.3| unnamed protein
           product [Vitis vinifera]
          Length = 80

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/78 (93%), Positives = 78/78 (100%)
 Frame = -3

Query: 342 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMV 163
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNG+E+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 162 VVRGNSVVTVEALEPVSR 109
           V+RGNSVVTVEALEPVSR
Sbjct: 61  VIRGNSVVTVEALEPVSR 78


>ref|XP_002322820.1| predicted protein [Populus trichocarpa] gi|222867450|gb|EEF04581.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/78 (92%), Positives = 78/78 (100%)
 Frame = -3

Query: 342 MSRSGQPPDLKKYMDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMV 163
           MSRSGQPPDLKKYMDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTV+VNGDE+TDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 60

Query: 162 VVRGNSVVTVEALEPVSR 109
           V+RGNSVVTVEALEPV+R
Sbjct: 61  VIRGNSVVTVEALEPVTR 78


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