BLASTX nr result

ID: Panax21_contig00007473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007473
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative ...   121   2e-25
ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25
gb|ABK93558.1| unknown [Populus trichocarpa]                          120   3e-25
ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleo...   120   3e-25
ref|XP_002322820.1| predicted protein [Populus trichocarpa] gi|2...   120   4e-25

>ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
           gi|223530136|gb|EEF32048.1| small nuclear
           ribonucleoprotein G, putative [Ricinus communis]
          Length = 80

 Score =  121 bits (304), Expect = 2e-25
 Identities = 60/65 (92%), Positives = 64/65 (98%)
 Frame = -3

Query: 870 MDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMVVIRGNSVVTVEAL 691
           MDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+TDIGMVVIRGNSVVTVEAL
Sbjct: 14  MDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEAL 73

Query: 690 EAVSR 676
           E V+R
Sbjct: 74  EPVNR 78


>ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|222854442|gb|EEE91989.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  121 bits (304), Expect = 2e-25
 Identities = 60/65 (92%), Positives = 64/65 (98%)
 Frame = -3

Query: 870 MDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMVVIRGNSVVTVEAL 691
           MDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+TDIGMVVIRGNSVVTVEAL
Sbjct: 14  MDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEAL 73

Query: 690 EAVSR 676
           E V+R
Sbjct: 74  EPVNR 78


>gb|ABK93558.1| unknown [Populus trichocarpa]
          Length = 80

 Score =  120 bits (302), Expect = 3e-25
 Identities = 59/65 (90%), Positives = 64/65 (98%)
 Frame = -3

Query: 870 MDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMVVIRGNSVVTVEAL 691
           MDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNGDE+TDIGMVV+RGNSVVTVEAL
Sbjct: 14  MDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVLRGNSVVTVEAL 73

Query: 690 EAVSR 676
           E V+R
Sbjct: 74  EPVNR 78


>ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
           vinifera] gi|297740131|emb|CBI30313.3| unnamed protein
           product [Vitis vinifera]
          Length = 80

 Score =  120 bits (302), Expect = 3e-25
 Identities = 60/65 (92%), Positives = 64/65 (98%)
 Frame = -3

Query: 870 MDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMVVIRGNSVVTVEAL 691
           MDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTVEVNG+E+TDIGMVVIRGNSVVTVEAL
Sbjct: 14  MDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSVVTVEAL 73

Query: 690 EAVSR 676
           E VSR
Sbjct: 74  EPVSR 78


>ref|XP_002322820.1| predicted protein [Populus trichocarpa] gi|222867450|gb|EEF04581.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  120 bits (301), Expect = 4e-25
 Identities = 59/65 (90%), Positives = 64/65 (98%)
 Frame = -3

Query: 870 MDKKLQIKMNANRMVVGTLRGFDQFMNLVIDNTVEVNGDERTDIGMVVIRGNSVVTVEAL 691
           MDKKLQIK+NANRMVVGTLRGFDQFMNLV+DNTV+VNGDE+TDIGMVVIRGNSVVTVEAL
Sbjct: 14  MDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMVVIRGNSVVTVEAL 73

Query: 690 EAVSR 676
           E V+R
Sbjct: 74  EPVTR 78


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