BLASTX nr result

ID: Panax21_contig00007471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007471
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   369   1e-99
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              369   1e-99
ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra...   305   2e-80
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra...   302   1e-79

>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  369 bits (946), Expect = 1e-99
 Identities = 223/416 (53%), Positives = 249/416 (59%), Gaps = 5/416 (1%)
 Frame = -2

Query: 1233 GRKSIRQRLINIAESKGLSTKAQFWKPWGLCNPGFDFAKNKGDKRKFEVTSLEEGEVIDE 1054
            GRKSIRQRLINIAESKGLSTK QFWKPWG      D    KGDK+KFEVTSLEEGEV++E
Sbjct: 1813 GRKSIRQRLINIAESKGLSTKVQFWKPWGWSYSSLDPVATKGDKKKFEVTSLEEGEVVEE 1872

Query: 1053 GIDSKRYSRGSSKAVDVKNVIVSQQHETERALIELVLPCIDQSSEDSRYTFASDLIKQMN 874
            G DSKRY++GS++  D     VSQQH TERAL+ELVLPCIDQSS+DSR  FASDLIKQM+
Sbjct: 1873 GTDSKRYAKGSTQMSDFDGFNVSQQHATERALVELVLPCIDQSSDDSRNAFASDLIKQMH 1932

Query: 873  NIEQQINAVTRGASKQPGTVTSGIEGSANKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
             IEQQIN VTRG +KQ GTV SG+EG ANK N                            
Sbjct: 1933 IIEQQINTVTRGTTKQAGTVLSGVEGPANKGN----------NRKGMRGGSPGLARRPTG 1982

Query: 693  XXXXXXXXXXXXRASMSXXXXXXXXXXXLVCADGEPSGRNMRYMLAAVILRLLGSRVVHE 514
                        RASM+           ++CA+GE S RNMR  LA+VILRLLGSRVVHE
Sbjct: 1983 VADSAPPSPAALRASMALRLQFLLRLLPIICAEGEQS-RNMRQSLASVILRLLGSRVVHE 2041

Query: 513  DLDQSFHPTLSSSSKREVEMQMEAS-SASVDLSGEXXXXXXXXXXXXXXXXFQPSWLKLK 337
            D D S + T S  SKRE E  MEAS +AS+DLSGE                 QPSWLK K
Sbjct: 2042 DADLSLYSTQSPPSKREAESLMEASTAASLDLSGESLFDRLLLVLHGLLSSCQPSWLKSK 2101

Query: 336  SNSKSTTECNSAYNVFDREVAENLQNDLDRTPLPDSIRWRIQTAMPVLFPSVRCSISCXX 157
            S SKSTTE    ++ FDRE AENLQNDLD   LPD+IRWRIQ AMP+L PS RCSISC  
Sbjct: 2102 SASKSTTESIKEFSGFDREAAENLQNDLDCMQLPDTIRWRIQAAMPILVPSGRCSISCQP 2161

Query: 156  XXXXXXXXXXXXXXXXXSGFN----NLPQRYPITSVRNAANVSGKNKPSPLQQDLD 1
                               F+    N  QR   + VR      GK K  PLQQD D
Sbjct: 2162 PSVSSAAVASLQPSLSFPAFHPGNTNQSQRNSSSLVR-----PGKLKNMPLQQDHD 2212


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  369 bits (946), Expect = 1e-99
 Identities = 223/416 (53%), Positives = 249/416 (59%), Gaps = 5/416 (1%)
 Frame = -2

Query: 1233 GRKSIRQRLINIAESKGLSTKAQFWKPWGLCNPGFDFAKNKGDKRKFEVTSLEEGEVIDE 1054
            GRKSIRQRLINIAESKGLSTK QFWKPWG      D    KGDK+KFEVTSLEEGEV++E
Sbjct: 1578 GRKSIRQRLINIAESKGLSTKVQFWKPWGWSYSSLDPVATKGDKKKFEVTSLEEGEVVEE 1637

Query: 1053 GIDSKRYSRGSSKAVDVKNVIVSQQHETERALIELVLPCIDQSSEDSRYTFASDLIKQMN 874
            G DSKRY++GS++  D     VSQQH TERAL+ELVLPCIDQSS+DSR  FASDLIKQM+
Sbjct: 1638 GTDSKRYAKGSTQMSDFDGFNVSQQHATERALVELVLPCIDQSSDDSRNAFASDLIKQMH 1697

Query: 873  NIEQQINAVTRGASKQPGTVTSGIEGSANKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
             IEQQIN VTRG +KQ GTV SG+EG ANK N                            
Sbjct: 1698 IIEQQINTVTRGTTKQAGTVLSGVEGPANKGN----------NRKGMRGGSPGLARRPTG 1747

Query: 693  XXXXXXXXXXXXRASMSXXXXXXXXXXXLVCADGEPSGRNMRYMLAAVILRLLGSRVVHE 514
                        RASM+           ++CA+GE S RNMR  LA+VILRLLGSRVVHE
Sbjct: 1748 VADSAPPSPAALRASMALRLQFLLRLLPIICAEGEQS-RNMRQSLASVILRLLGSRVVHE 1806

Query: 513  DLDQSFHPTLSSSSKREVEMQMEAS-SASVDLSGEXXXXXXXXXXXXXXXXFQPSWLKLK 337
            D D S + T S  SKRE E  MEAS +AS+DLSGE                 QPSWLK K
Sbjct: 1807 DADLSLYSTQSPPSKREAESLMEASTAASLDLSGESLFDRLLLVLHGLLSSCQPSWLKSK 1866

Query: 336  SNSKSTTECNSAYNVFDREVAENLQNDLDRTPLPDSIRWRIQTAMPVLFPSVRCSISCXX 157
            S SKSTTE    ++ FDRE AENLQNDLD   LPD+IRWRIQ AMP+L PS RCSISC  
Sbjct: 1867 SASKSTTESIKEFSGFDREAAENLQNDLDCMQLPDTIRWRIQAAMPILVPSGRCSISCQP 1926

Query: 156  XXXXXXXXXXXXXXXXXSGFN----NLPQRYPITSVRNAANVSGKNKPSPLQQDLD 1
                               F+    N  QR   + VR      GK K  PLQQD D
Sbjct: 1927 PSVSSAAVASLQPSLSFPAFHPGNTNQSQRNSSSLVR-----PGKLKNMPLQQDHD 1977


>ref|XP_002302587.1| predicted protein [Populus trichocarpa] gi|222844313|gb|EEE81860.1|
            predicted protein [Populus trichocarpa]
          Length = 2219

 Score =  352 bits (903), Expect = 1e-94
 Identities = 205/410 (50%), Positives = 248/410 (60%), Gaps = 4/410 (0%)
 Frame = -2

Query: 1233 GRKSIRQRLINIAESKGLSTKAQFWKPWGLCNPGFDFAKNKGDKRKFEVTSLEEGEVIDE 1054
            GRK+IRQRLINIAESKGLSTKA FWKPWG  N GFD   N+GDK+KFEV SLEEGEV++E
Sbjct: 1753 GRKTIRQRLINIAESKGLSTKAHFWKPWGWSNSGFDPVMNRGDKKKFEVPSLEEGEVVEE 1812

Query: 1053 GIDSKRYSRGSSKAVDVKNVIVSQQHETERALIELVLPCIDQSSEDSRYTFASDLIKQMN 874
            G ++KR  +GS    + +   + QQ+ TERAL+ELVLPCIDQ S+DSR TFA+DLIKQ+N
Sbjct: 1813 GTETKRSGKGSFPVFESEGSSLFQQNVTERALVELVLPCIDQGSDDSRNTFATDLIKQLN 1872

Query: 873  NIEQQINAVTRGASKQPGTVTSGIEGSANKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
            NIEQQIN+VTRG SKQ GT +SG+EG ANK+N                            
Sbjct: 1873 NIEQQINSVTRGTSKQTGTASSGLEGPANKSN----------NRKGIRGGSPGLARRTAA 1922

Query: 693  XXXXXXXXXXXXRASMSXXXXXXXXXXXLVCADGEPSGRNMRYMLAAVILRLLGSRVVHE 514
                        RASM             +C +GEPSGRNMR++LA+VILRLLGSRVVHE
Sbjct: 1923 AADSTLPSPAALRASMLLRLQLLLRLLPTICTNGEPSGRNMRHVLASVILRLLGSRVVHE 1982

Query: 513  DLDQSFHPTLSSSSKREVEMQMEASSASVDLSGEXXXXXXXXXXXXXXXXFQPSWLKLK- 337
            D + SF+P  S  SK E+E  +EA+SA  DLSGE                 +PSWLK + 
Sbjct: 1983 DAELSFYPLQSFQSKGELESPLEAASA--DLSGESLFDRLLLVLHGLLSSSRPSWLKPRP 2040

Query: 336  -SNSKSTTECNSAYNVFDREVAENLQNDLDRTPLPDSIRWRIQTAMPVLFPSVRCSISCX 160
             S+SKS  E +     FDR++ E+LQNDLDR  LP S R RIQ AMP+L PSVRC +SC 
Sbjct: 2041 ASSSKSVNESSKDCAGFDRDLVESLQNDLDRMKLPGSTRLRIQAAMPILLPSVRCFVSCQ 2100

Query: 159  XXXXXXXXXXXXXXXXXXSGF--NNLPQRYPITSVRNAANVSGKNKPSPL 16
                              SG    N  Q+ P    R+A N+S K+KP PL
Sbjct: 2101 PPPVPTAAAASLQPSIAISGVLNGNNSQKNPAPLARSANNISTKSKPLPL 2150


>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Cucumis sativus]
          Length = 2254

 Score =  305 bits (780), Expect = 2e-80
 Identities = 190/416 (45%), Positives = 232/416 (55%), Gaps = 5/416 (1%)
 Frame = -2

Query: 1233 GRKSIRQRLINIAESKGLSTKAQFWKPWGLCNPGFDFAKNKGDKRKFEVTSLEEGEVIDE 1054
            GRKSIRQRL NIAESKGLSTK  FWKPWG C  G D             + LEEGEV++E
Sbjct: 1802 GRKSIRQRLTNIAESKGLSTKTMFWKPWGWCTSGSD------------TSYLEEGEVVEE 1849

Query: 1053 GIDSKRYSRGSSKAVDVKNVIVSQQHETERALIELVLPCIDQSSEDSRYTFASDLIKQMN 874
            G DS++Y++ S   +D + +   QQ+ TERALIELVLPCIDQSSE+SR TFA+DLIKQ+N
Sbjct: 1850 GTDSRKYNQKSVPMLDNEVLHSGQQYVTERALIELVLPCIDQSSEESRNTFANDLIKQLN 1909

Query: 873  NIEQQINAVTRGASKQPGTVTSGIEGSANKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
            NIEQQINAVT G SKQ G+V SGIEG  +K +                            
Sbjct: 1910 NIEQQINAVTSGTSKQTGSVPSGIEGPTSKGS-----------SRKMKGGSPGMARRSTG 1958

Query: 693  XXXXXXXXXXXXRASMSXXXXXXXXXXXLVCADGEPSGRNMRYMLAAVILRLLGSRVVHE 514
                        RASMS           ++  D EPSGRNMR+MLA+VILRLLG+R+VHE
Sbjct: 1959 STDSPLPSPAALRASMSLRLQLILRLLPVILEDREPSGRNMRHMLASVILRLLGNRMVHE 2018

Query: 513  DLDQSFHPTLSSSSKREVEMQMEAS-SASVDLSGEXXXXXXXXXXXXXXXXFQPSWLKLK 337
            D + +F PT S   K+EVE   EAS +A  DL GE                 QPSWL LK
Sbjct: 2019 DANLTFCPTHSLMVKKEVESPSEASFAAFADLPGECLFGRMLLILHGLLSSCQPSWLGLK 2078

Query: 336  SNSKSTTECNSAYNVFDREVAENLQNDLDRTPLPDSIRWRIQTAMPVLFPSVRCSISCXX 157
            + +KST E +   +   RE+AE+LQN+L    LPD IRWRIQ AMP+  P  RC +S   
Sbjct: 2079 NAAKSTNETSKDSSSLVRELAESLQNELHCMQLPDMIRWRIQAAMPIPLPPGRCFLSYQP 2138

Query: 156  XXXXXXXXXXXXXXXXXSGF----NNLPQRYPITSVRNAANVSGKNKPSPLQQDLD 1
                              G     +++PQ   I+S R   +  GK+KP P QQD D
Sbjct: 2139 PTIPHSALSSFQSSISTPGHGSGNSSMPQGSKISSPRVVPSAPGKSKPLPPQQDHD 2194


>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            12-like [Cucumis sativus]
          Length = 2254

 Score =  302 bits (774), Expect = 1e-79
 Identities = 189/416 (45%), Positives = 231/416 (55%), Gaps = 5/416 (1%)
 Frame = -2

Query: 1233 GRKSIRQRLINIAESKGLSTKAQFWKPWGLCNPGFDFAKNKGDKRKFEVTSLEEGEVIDE 1054
            GRKSIRQRL NIAESKGLSTK  FWKPW  C  G D             + LEEGEV++E
Sbjct: 1802 GRKSIRQRLTNIAESKGLSTKTMFWKPWSWCTSGSD------------TSYLEEGEVVEE 1849

Query: 1053 GIDSKRYSRGSSKAVDVKNVIVSQQHETERALIELVLPCIDQSSEDSRYTFASDLIKQMN 874
            G DS++Y++ S   +D + +   QQ+ TERALIELVLPCIDQSSE+SR TFA+DLIKQ+N
Sbjct: 1850 GTDSRKYNQKSVPMLDNEVLHSGQQYVTERALIELVLPCIDQSSEESRNTFANDLIKQLN 1909

Query: 873  NIEQQINAVTRGASKQPGTVTSGIEGSANKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 694
            NIEQQINAVT G SKQ G+V SGIEG  +K +                            
Sbjct: 1910 NIEQQINAVTSGTSKQTGSVPSGIEGPTSKGS-----------SRKMKGGSPGMARRSTG 1958

Query: 693  XXXXXXXXXXXXRASMSXXXXXXXXXXXLVCADGEPSGRNMRYMLAAVILRLLGSRVVHE 514
                        RASMS           ++  D EPSGRNMR+MLA+VILRLLG+R+VHE
Sbjct: 1959 STDSPLPSPAALRASMSLRLQLILRLLPVILEDREPSGRNMRHMLASVILRLLGNRMVHE 2018

Query: 513  DLDQSFHPTLSSSSKREVEMQMEAS-SASVDLSGEXXXXXXXXXXXXXXXXFQPSWLKLK 337
            D + +F PT S   K+EVE   EAS +A  DL GE                 QPSWL LK
Sbjct: 2019 DANLTFCPTHSLMVKKEVESPSEASFAAFADLPGECLFGRMLLILHGLLSSCQPSWLGLK 2078

Query: 336  SNSKSTTECNSAYNVFDREVAENLQNDLDRTPLPDSIRWRIQTAMPVLFPSVRCSISCXX 157
            + +KST E +   +   RE+AE+LQN+L    LPD IRWRIQ AMP+  P  RC +S   
Sbjct: 2079 NAAKSTNETSKDSSSLVRELAESLQNELHCMQLPDMIRWRIQAAMPIPLPPGRCFLSYQP 2138

Query: 156  XXXXXXXXXXXXXXXXXSGF----NNLPQRYPITSVRNAANVSGKNKPSPLQQDLD 1
                              G     +++PQ   I+S R   +  GK+KP P QQD D
Sbjct: 2139 PTIPHSALSSFQSSISTPGHGSGNSSMPQGSKISSPRVVPSAPGKSKPLPPQQDHD 2194


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