BLASTX nr result

ID: Panax21_contig00007468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007468
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier f...   238   4e-61
emb|CAN73411.1| hypothetical protein VITISV_024376 [Vitis vinifera]   238   4e-61
ref|XP_002309090.1| predicted protein [Populus trichocarpa] gi|2...   230   8e-59
emb|CBI31606.3| unnamed protein product [Vitis vinifera]              228   5e-58
ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier f...   228   5e-58

>ref|XP_002272651.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis
           vinifera] gi|297740295|emb|CBI30477.3| unnamed protein
           product [Vitis vinifera]
          Length = 336

 Score =  238 bits (607), Expect = 4e-61
 Identities = 118/140 (84%), Positives = 125/140 (89%)
 Frame = +3

Query: 54  SQIGTVPQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVALLSKPCIWREGLRIVQE 233
           SQIGTV QLLAGGIAGAFSKTCTAPLARLTILFQVQGM SDVA LSK  IW E  RIV E
Sbjct: 35  SQIGTVHQLLAGGIAGAFSKTCTAPLARLTILFQVQGMQSDVATLSKASIWHEASRIVHE 94

Query: 234 EGFRAFWKGNLVTIAHRLPYTAVNFYAYERYKSFLKSFTGLESHSGNASADIFVHFVSGG 413
           EGFRAFWKGNLVTI HRLPY++VNFYAYERYKSFL+S +G+ESH GN SAD+ VHFVSGG
Sbjct: 95  EGFRAFWKGNLVTIVHRLPYSSVNFYAYERYKSFLQSISGIESHKGNVSADMSVHFVSGG 154

Query: 414 LAGITAASVTYPLDLIRTRL 473
           LAGITAAS TYPLDL+RTRL
Sbjct: 155 LAGITAASATYPLDLVRTRL 174


>emb|CAN73411.1| hypothetical protein VITISV_024376 [Vitis vinifera]
          Length = 331

 Score =  238 bits (607), Expect = 4e-61
 Identities = 118/140 (84%), Positives = 125/140 (89%)
 Frame = +3

Query: 54  SQIGTVPQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVALLSKPCIWREGLRIVQE 233
           SQIGTV QLLAGGIAGAFSKTCTAPLARLTILFQVQGM SDVA LSK  IW E  RIV E
Sbjct: 30  SQIGTVHQLLAGGIAGAFSKTCTAPLARLTILFQVQGMQSDVATLSKASIWHEASRIVHE 89

Query: 234 EGFRAFWKGNLVTIAHRLPYTAVNFYAYERYKSFLKSFTGLESHSGNASADIFVHFVSGG 413
           EGFRAFWKGNLVTI HRLPY++VNFYAYERYKSFL+S +G+ESH GN SAD+ VHFVSGG
Sbjct: 90  EGFRAFWKGNLVTIVHRLPYSSVNFYAYERYKSFLQSISGIESHKGNVSADMSVHFVSGG 149

Query: 414 LAGITAASVTYPLDLIRTRL 473
           LAGITAAS TYPLDL+RTRL
Sbjct: 150 LAGITAASATYPLDLVRTRL 169


>ref|XP_002309090.1| predicted protein [Populus trichocarpa] gi|222855066|gb|EEE92613.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  230 bits (587), Expect = 8e-59
 Identities = 109/140 (77%), Positives = 124/140 (88%)
 Frame = +3

Query: 54  SQIGTVPQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVALLSKPCIWREGLRIVQE 233
           SQ+GT+ QLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDV  LSK  IWRE  R++ E
Sbjct: 48  SQLGTIQQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVTALSKASIWREASRVMNE 107

Query: 234 EGFRAFWKGNLVTIAHRLPYTAVNFYAYERYKSFLKSFTGLESHSGNASADIFVHFVSGG 413
           EGFRAFWKGNLVTIAHRLPY++V+FYAYERYKS L+S  G+E+H GN +AD+ VHF+ GG
Sbjct: 108 EGFRAFWKGNLVTIAHRLPYSSVSFYAYERYKSLLQSVLGVENHGGNGTADLAVHFIGGG 167

Query: 414 LAGITAASVTYPLDLIRTRL 473
           +AGITAAS TYPLDL+RTRL
Sbjct: 168 MAGITAASATYPLDLVRTRL 187


>emb|CBI31606.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  228 bits (580), Expect = 5e-58
 Identities = 111/140 (79%), Positives = 123/140 (87%)
 Frame = +3

Query: 54  SQIGTVPQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVALLSKPCIWREGLRIVQE 233
           SQIGT+PQLLAGGIAGA SKTCTAPLARLTILFQVQGMHSDVA L+K  IW+E  RI+ E
Sbjct: 45  SQIGTIPQLLAGGIAGALSKTCTAPLARLTILFQVQGMHSDVATLTKASIWQEASRIIGE 104

Query: 234 EGFRAFWKGNLVTIAHRLPYTAVNFYAYERYKSFLKSFTGLESHSGNASADIFVHFVSGG 413
           EGFRAFWKGNLVTIAHRLPY++V+FYAYERYK+ L    GLESH  N SAD+ VHFV+GG
Sbjct: 105 EGFRAFWKGNLVTIAHRLPYSSVSFYAYERYKNILHLVPGLESHKRNTSADLGVHFVAGG 164

Query: 414 LAGITAASVTYPLDLIRTRL 473
           LAG+TAAS TYPLDL+RTRL
Sbjct: 165 LAGLTAASATYPLDLVRTRL 184


>ref|XP_002282149.1| PREDICTED: mitochondrial substrate carrier family protein B isoform
           1 [Vitis vinifera]
          Length = 346

 Score =  228 bits (580), Expect = 5e-58
 Identities = 111/140 (79%), Positives = 123/140 (87%)
 Frame = +3

Query: 54  SQIGTVPQLLAGGIAGAFSKTCTAPLARLTILFQVQGMHSDVALLSKPCIWREGLRIVQE 233
           SQIGT+PQLLAGGIAGA SKTCTAPLARLTILFQVQGMHSDVA L+K  IW+E  RI+ E
Sbjct: 45  SQIGTIPQLLAGGIAGALSKTCTAPLARLTILFQVQGMHSDVATLTKASIWQEASRIIGE 104

Query: 234 EGFRAFWKGNLVTIAHRLPYTAVNFYAYERYKSFLKSFTGLESHSGNASADIFVHFVSGG 413
           EGFRAFWKGNLVTIAHRLPY++V+FYAYERYK+ L    GLESH  N SAD+ VHFV+GG
Sbjct: 105 EGFRAFWKGNLVTIAHRLPYSSVSFYAYERYKNILHLVPGLESHKRNTSADLGVHFVAGG 164

Query: 414 LAGITAASVTYPLDLIRTRL 473
           LAG+TAAS TYPLDL+RTRL
Sbjct: 165 LAGLTAASATYPLDLVRTRL 184


Top