BLASTX nr result

ID: Panax21_contig00007458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007458
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 com...   336   8e-90
ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220...   323   5e-86
ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83
ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 com...   308   2e-81
ref|NP_565778.1| ATP synthase mitochondrial F1 complex assembly ...   298   1e-78

>ref|XP_002272818.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
           [Vitis vinifera] gi|297740461|emb|CBI30643.3| unnamed
           protein product [Vitis vinifera]
          Length = 245

 Score =  336 bits (861), Expect = 8e-90
 Identities = 172/259 (66%), Positives = 202/259 (77%)
 Frame = -2

Query: 989 MQRLATRVSRIALSSVGSFRCSASCSLFLSKQCFTSSSLPMNFQKLNRHVIPVDILKWGS 810
           MQR++ RVSRI  SSV S    AS     S Q F + S+  NF+KL +  IP D  KWGS
Sbjct: 1   MQRVSGRVSRIITSSVASLLVRAS-----STQSFGTFSVKPNFRKLQQG-IPGDFPKWGS 54

Query: 809 LGLCRNSSFATGFTPLKAKPLGSIIDIERAENQSPEDLAAIWDDYHLGRGHIGASMKAKL 630
           LG CR   FA+GFTPL+ KPLGSI+DIER +++S ED+A+IWDDYHLGRGHI ASMK KL
Sbjct: 55  LGFCRTLGFASGFTPLQPKPLGSILDIERVKDRSSEDIASIWDDYHLGRGHIAASMKPKL 114

Query: 629 YHLLDQRAADCRYFVIPLWKGSXXXXXXXXXXXXXXXXXXXXMPYMLFTGLEDYKARGTQ 450
           YHLL+ RAA+CR+FVIPLW+GS                    M +M+FTGLEDYKARGTQ
Sbjct: 115 YHLLEHRAANCRHFVIPLWRGSGYATMFAQVQ----------MQHMIFTGLEDYKARGTQ 164

Query: 449 AAPYFTVSYYSEFAETKDLVLIRGDVVFTSKLTDSEAKWLLETTQSFYLNDMRYKLIERF 270
           AAPYFTV++Y++FAE+KDLVLIRGD+VFTSKL+DSEAKWLLET QSFYLND+RYKL+ERF
Sbjct: 165 AAPYFTVTFYTDFAESKDLVLIRGDIVFTSKLSDSEAKWLLETAQSFYLNDVRYKLVERF 224

Query: 269 NKETREFEFKDILQALDMP 213
           NKETREFEFKD+LQALDMP
Sbjct: 225 NKETREFEFKDVLQALDMP 243


>ref|XP_004134937.1| PREDICTED: uncharacterized protein LOC101220963 [Cucumis sativus]
           gi|449479251|ref|XP_004155549.1| PREDICTED:
           uncharacterized protein LOC101229737 [Cucumis sativus]
          Length = 248

 Score =  323 bits (828), Expect = 5e-86
 Identities = 160/230 (69%), Positives = 183/230 (79%)
 Frame = -2

Query: 902 SKQCFTSSSLPMNFQKLNRHVIPVDILKWGSLGLCRNSSFATGFTPLKAKPLGSIIDIER 723
           S+  F + SL     KL +   P D LKW SLG  R S FATGF PL+ KPL SIID+ER
Sbjct: 31  SRSYFANPSLG----KLQKETNPSDFLKWSSLGFFRTSKFATGFNPLQPKPLDSIIDMER 86

Query: 722 AENQSPEDLAAIWDDYHLGRGHIGASMKAKLYHLLDQRAADCRYFVIPLWKGSXXXXXXX 543
           A+++SPEDLA+IWDDYHLGRGHIG SMKAKLYHLL+QRAADCRYFVIPLW+GS       
Sbjct: 87  AKDRSPEDLASIWDDYHLGRGHIGISMKAKLYHLLEQRAADCRYFVIPLWRGSGYTTMFV 146

Query: 542 XXXXXXXXXXXXXMPYMLFTGLEDYKARGTQAAPYFTVSYYSEFAETKDLVLIRGDVVFT 363
                         P+++FTGLEDYKARGTQAAPYFTVSYY EFAE+KDLVLIRGD+VFT
Sbjct: 147 QVQT----------PHIIFTGLEDYKARGTQAAPYFTVSYYKEFAESKDLVLIRGDIVFT 196

Query: 362 SKLTDSEAKWLLETTQSFYLNDMRYKLIERFNKETREFEFKDILQALDMP 213
           SKLTD EA+WLLETTQSFYLND+RYKL+ERFN++TR+FEFKD+LQALDMP
Sbjct: 197 SKLTDEEAEWLLETTQSFYLNDVRYKLVERFNRQTRDFEFKDVLQALDMP 246


>ref|XP_002305764.1| predicted protein [Populus trichocarpa] gi|222848728|gb|EEE86275.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  315 bits (807), Expect = 1e-83
 Identities = 158/261 (60%), Positives = 194/261 (74%)
 Frame = -2

Query: 989 MQRLATRVSRIALSSVGSFRCSASCSLFLSKQCFTSSSLPMNFQKLNRHVIPVDILKWGS 810
           MQR+++R++R +         S   +  + +   T S    N QK     IP   LKWGS
Sbjct: 1   MQRISSRLTRTS-------SLSTLLTQTIKRSSNTHSLKSANLQKQQEPAIPGHFLKWGS 53

Query: 809 LGLCRNSSFATGFTPLKAKPLGSIIDIERAENQSPEDLAAIWDDYHLGRGHIGASMKAKL 630
           LG  R S FATGFTPL+ KPL SI+DIERA+ +SPEDLA+IWDDYHLGRGHIGASMKAKL
Sbjct: 54  LGFVRTSRFATGFTPLEPKPLDSIMDIERAKTKSPEDLASIWDDYHLGRGHIGASMKAKL 113

Query: 629 YHLLDQRAADCRYFVIPLWKGSXXXXXXXXXXXXXXXXXXXXMPYMLFTGLEDYKARGTQ 450
           Y LL QRAADC+YFVIPLW+GS                    MP+M+FTGLEDYK+RGTQ
Sbjct: 114 YQLLVQRAADCKYFVIPLWRGSGYTTMFAQVQ----------MPHMIFTGLEDYKSRGTQ 163

Query: 449 AAPYFTVSYYSEFAETKDLVLIRGDVVFTSKLTDSEAKWLLETTQSFYLNDMRYKLIERF 270
           A+PY TV +Y+EFAE+KDLVLIRGD+VFTSKLTD EA+W+LET QSFYLND+R+KL+E+F
Sbjct: 164 ASPYLTVKFYTEFAESKDLVLIRGDIVFTSKLTDEEAEWILETAQSFYLNDVRFKLVEQF 223

Query: 269 NKETREFEFKDILQALDMPSM 207
           NK+TR+FEFKD+L++L+MP M
Sbjct: 224 NKQTRDFEFKDVLRSLNMPIM 244


>ref|XP_003539932.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1
           [Glycine max]
          Length = 251

 Score =  308 bits (788), Expect = 2e-81
 Identities = 143/216 (66%), Positives = 175/216 (81%)
 Frame = -2

Query: 860 QKLNRHVIPVDILKWGSLGLCRNSSFATGFTPLKAKPLGSIIDIERAENQSPEDLAAIWD 681
           +KL++  IP D  KWGS+G CR S FA+GF PL+ KPL SI+D+ R +++ PED+A++WD
Sbjct: 44  KKLHQPEIPSDFQKWGSVGFCRTSKFASGFNPLQPKPLDSIVDVHRLKDRYPEDIASVWD 103

Query: 680 DYHLGRGHIGASMKAKLYHLLDQRAADCRYFVIPLWKGSXXXXXXXXXXXXXXXXXXXXM 501
           DYH+GRGHIGA+MKAKLYHLL+ RA++CRYFVIPLW+GS                     
Sbjct: 104 DYHIGRGHIGATMKAKLYHLLEHRASECRYFVIPLWRGSGYTTMFVQVQT---------- 153

Query: 500 PYMLFTGLEDYKARGTQAAPYFTVSYYSEFAETKDLVLIRGDVVFTSKLTDSEAKWLLET 321
           P+M+FTGLEDYKARGTQAAPYFT+++Y+EFAE+KDLVLIRGDVVFTSKLTD EAKWLLET
Sbjct: 154 PHMIFTGLEDYKARGTQAAPYFTLTFYTEFAESKDLVLIRGDVVFTSKLTDPEAKWLLET 213

Query: 320 TQSFYLNDMRYKLIERFNKETREFEFKDILQALDMP 213
            QSFYLND RYKL+ERFN++T +FEFKD+LQ LDMP
Sbjct: 214 AQSFYLNDARYKLVERFNRQTHDFEFKDVLQVLDMP 249


>ref|NP_565778.1| ATP synthase mitochondrial F1 complex assembly factor 1
           [Arabidopsis thaliana] gi|15450478|gb|AAK96532.1|
           At2g34050/T14G11.17 [Arabidopsis thaliana]
           gi|20196905|gb|AAB67623.2| expressed protein
           [Arabidopsis thaliana] gi|24797040|gb|AAN64532.1|
           At2g34050/T14G11.17 [Arabidopsis thaliana]
           gi|330253817|gb|AEC08911.1| ATP synthase mitochondrial
           F1 complex assembly factor 1 [Arabidopsis thaliana]
          Length = 248

 Score =  298 bits (764), Expect = 1e-78
 Identities = 149/259 (57%), Positives = 189/259 (72%)
 Frame = -2

Query: 989 MQRLATRVSRIALSSVGSFRCSASCSLFLSKQCFTSSSLPMNFQKLNRHVIPVDILKWGS 810
           M+R+   +S +A   + S   S+S  +F ++   +SS       KL+   +P + +KW S
Sbjct: 1   MRRIVGSISSLAKDKLSSSSYSSSRQIFTAR---SSSWQRDASSKLSEASLPGNHIKWAS 57

Query: 809 LGLCRNSSFATGFTPLKAKPLGSIIDIERAENQSPEDLAAIWDDYHLGRGHIGASMKAKL 630
           LG  RNS FA+GFTPL+ KPL SI+D+ RA+ +SPE+L +IWDDYHLGRGHIG +MKA+L
Sbjct: 58  LGSVRNSRFASGFTPLQQKPLDSIMDLARAKTKSPEELTSIWDDYHLGRGHIGLTMKAQL 117

Query: 629 YHLLDQRAADCRYFVIPLWKGSXXXXXXXXXXXXXXXXXXXXMPYMLFTGLEDYKARGTQ 450
           Y LL+QRA++CRYFVIPLW+G+                     P+M+FTGLEDYKARGTQ
Sbjct: 118 YRLLEQRASECRYFVIPLWRGNGYITMFAQVEA----------PHMIFTGLEDYKARGTQ 167

Query: 449 AAPYFTVSYYSEFAETKDLVLIRGDVVFTSKLTDSEAKWLLETTQSFYLNDMRYKLIERF 270
           AAPY T ++Y+E +ETKDLV IRGDVVFTSKLTD EAKW++ET QSFYLND RYKL+ERF
Sbjct: 168 AAPYLTTTFYTELSETKDLVFIRGDVVFTSKLTDEEAKWIMETAQSFYLNDSRYKLLERF 227

Query: 269 NKETREFEFKDILQALDMP 213
           NK T +FEFKD+LQALDMP
Sbjct: 228 NKHTHDFEFKDVLQALDMP 246


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