BLASTX nr result

ID: Panax21_contig00007457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007457
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278557.1| PREDICTED: uncharacterized protein LOC100250...    76   5e-12
ref|NP_001044185.1| Os01g0738000 [Oryza sativa Japonica Group] g...    62   1e-07
dbj|BAK04341.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   3e-07
gb|EEC71445.1| hypothetical protein OsI_03663 [Oryza sativa Indi...    57   2e-06
ref|XP_002525384.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_002278557.1| PREDICTED: uncharacterized protein LOC100250866 [Vitis vinifera]
           gi|296087677|emb|CBI34933.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 57/133 (42%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
 Frame = +1

Query: 13  MASSSGRKFLQRSTIXXXXXXXXXXXXXXXGLTPSSPPS----------PASRIFPRQNP 162
           MASSS R+FLQRS+                    S+P S          PA+R    + P
Sbjct: 1   MASSSARRFLQRSSSTTRAYLSRNQRPPTSPSVVSAPSSLAGVASSQSTPAARFSRLKYP 60

Query: 163 FFSSRXXXXXXXXXXXXXXXXXXXXXRLPVELSCATESLMPLHSATASVLLRSMLSSKVG 342
             SS                      RLPVEL+ +T S+MPLHSATAS LL SMLSSKVG
Sbjct: 61  SCSS----------------------RLPVELA-STVSMMPLHSATASALLNSMLSSKVG 97

Query: 343 QWGVLSQGFATPL 381
            WG LS+GFATPL
Sbjct: 98  SWGWLSEGFATPL 110


>ref|NP_001044185.1| Os01g0738000 [Oryza sativa Japonica Group]
           gi|57900573|dbj|BAD87025.1| unknown protein [Oryza
           sativa Japonica Group] gi|113533716|dbj|BAF06099.1|
           Os01g0738000 [Oryza sativa Japonica Group]
           gi|215692887|dbj|BAG88307.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222619221|gb|EEE55353.1| hypothetical protein
           OsJ_03385 [Oryza sativa Japonica Group]
          Length = 102

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 31/47 (65%), Positives = 33/47 (70%)
 Frame = +1

Query: 241 RLPVELSCATESLMPLHSATASVLLRSMLSSKVGQWGVLSQGFATPL 381
           R+PVE       LMPLHSATAS LL SML  K G WG LS+GFATPL
Sbjct: 56  RVPVEALGGAHGLMPLHSATASALLTSMLGLKPGSWGWLSEGFATPL 102


>dbj|BAK04341.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 101

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = +1

Query: 241 RLPVELSCATESLMPLHSATASVLLRSMLSSKVGQWGVLSQGFATPL 381
           R+PV      + LMPLHSATAS LL SML  K G WG LS+GFATPL
Sbjct: 55  RVPVAALGGVQGLMPLHSATASALLTSMLGLKPGSWGWLSEGFATPL 101


>gb|EEC71445.1| hypothetical protein OsI_03663 [Oryza sativa Indica Group]
          Length = 102

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/46 (63%), Positives = 31/46 (67%)
 Frame = +1

Query: 244 LPVELSCATESLMPLHSATASVLLRSMLSSKVGQWGVLSQGFATPL 381
           +PV        LMPLHSATAS LL SML  K G WG LS+GFATPL
Sbjct: 57  VPVAALGGAHGLMPLHSATASALLTSMLGLKPGSWGWLSEGFATPL 102


>ref|XP_002525384.1| conserved hypothetical protein [Ricinus communis]
           gi|223535347|gb|EEF37022.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 104

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/47 (61%), Positives = 33/47 (70%)
 Frame = +1

Query: 241 RLPVELSCATESLMPLHSATASVLLRSMLSSKVGQWGVLSQGFATPL 381
           RLP+EL  A  SLMP+HS TAS L  S+LS     WG LS+GFATPL
Sbjct: 59  RLPLELGAAL-SLMPMHSVTASALFTSLLSLHNQSWGCLSEGFATPL 104


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