BLASTX nr result

ID: Panax21_contig00007449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007449
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig...   265   3e-90
ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig...   245   3e-84
ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2...   249   4e-83
gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersi...   240   4e-81
gb|AEW69796.1| Hop-interacting protein THI033 [Solanum lycopersi...   234   3e-79

>ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  265 bits (677), Expect(2) = 3e-90
 Identities = 127/172 (73%), Positives = 140/172 (81%), Gaps = 2/172 (1%)
 Frame = +3

Query: 246 LLEQALMEANREREKSILKGTAYSVSSPSHSDTGIDDNISETSDAELCCICFDQVCTIEV 425
           LLEQALMEANREREKSILKGT+YS+ SPSHSD  +DDNISE S+ ELCCICFDQVCTIEV
Sbjct: 274 LLEQALMEANREREKSILKGTSYSLPSPSHSDVAVDDNISEASETELCCICFDQVCTIEV 333

Query: 426 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSSITQL--XXXXXXXXXXXXXXX 599
           QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRS I +L                 
Sbjct: 334 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDVGD 393

Query: 600 LASSNPRKSRRFRNYSEGSSSFKSLAAVGSFGRMGARGLGRVAAENEWVDKP 755
           ++SS  R+SR+ RN SEGSSSFK L+AVGSF +MG RG GR+AAENEW+DKP
Sbjct: 394 VSSSKLRRSRKSRNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 445



 Score = 93.6 bits (231), Expect(2) = 3e-90
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +1

Query: 1   GSLDCIRELLAWGADRLQRDSSGRIPYTVALKHKHGACAALLNPS 135
           GSLDCIRELLAWGADRLQRDSSGRIPY VALKHKHGACAALLNP+
Sbjct: 206 GSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKHGACAALLNPT 250


>ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2
           [Vitis vinifera]
          Length = 438

 Score =  245 bits (625), Expect(2) = 3e-84
 Identities = 121/172 (70%), Positives = 133/172 (77%), Gaps = 2/172 (1%)
 Frame = +3

Query: 246 LLEQALMEANREREKSILKGTAYSVSSPSHSDTGIDDNISETSDAELCCICFDQVCTIEV 425
           LLEQALMEANREREKSILKGT+YS+ SPSHSD          S+ ELCCICFDQVCTIEV
Sbjct: 274 LLEQALMEANREREKSILKGTSYSLPSPSHSDVA-------ASETELCCICFDQVCTIEV 326

Query: 426 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSSITQL--XXXXXXXXXXXXXXX 599
           QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRS I +L                 
Sbjct: 327 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKTNNEADSDVGD 386

Query: 600 LASSNPRKSRRFRNYSEGSSSFKSLAAVGSFGRMGARGLGRVAAENEWVDKP 755
           ++SS  R+SR+ RN SEGSSSFK L+AVGSF +MG RG GR+AAENEW+DKP
Sbjct: 387 VSSSKLRRSRKSRNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 438



 Score = 93.6 bits (231), Expect(2) = 3e-84
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +1

Query: 1   GSLDCIRELLAWGADRLQRDSSGRIPYTVALKHKHGACAALLNPS 135
           GSLDCIRELLAWGADRLQRDSSGRIPY VALKHKHGACAALLNP+
Sbjct: 206 GSLDCIRELLAWGADRLQRDSSGRIPYVVALKHKHGACAALLNPT 250


>ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  249 bits (637), Expect(2) = 4e-83
 Identities = 123/172 (71%), Positives = 135/172 (78%), Gaps = 2/172 (1%)
 Frame = +3

Query: 246 LLEQALMEANREREKSILKGTAYSVSSPSHSDTGIDDNISETSDAELCCICFDQVCTIEV 425
           LLE ALMEANREREK+ILKGT YS+ SPSHSD G DDNISE SD ELCCICF+QVCTIEV
Sbjct: 273 LLECALMEANREREKNILKGTGYSLPSPSHSDDGTDDNISEASDTELCCICFEQVCTIEV 332

Query: 426 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSSITQL--XXXXXXXXXXXXXXX 599
           +DCGHQMCAQCTLALCCHNKPNPTTACLT PVCPFCRS+I +L                 
Sbjct: 333 EDCGHQMCAQCTLALCCHNKPNPTTACLTPPVCPFCRSTIARLVVAKMKDCNDADQDIGD 392

Query: 600 LASSNPRKSRRFRNYSEGSSSFKSLAAVGSFGRMGARGLGRVAAENEWVDKP 755
           + S   RKSRR  N+SEGSSSFK L+A  +FG+MG RG GR+AAENEWVDKP
Sbjct: 393 VGSPKLRKSRRSLNFSEGSSSFKGLSA--TFGKMGGRGSGRIAAENEWVDKP 442



 Score = 85.1 bits (209), Expect(2) = 4e-83
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   GSLDCIRELLAWGADRLQRDSSGRIPYTVALKHKHGACAALLNPS 135
           GSLDCIRELLAWGADR+QRD+SGRIPY VALK+++G CAALLNPS
Sbjct: 205 GSLDCIRELLAWGADRMQRDASGRIPYVVALKYRNGTCAALLNPS 249


>gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersicum]
          Length = 446

 Score =  240 bits (613), Expect(2) = 4e-81
 Identities = 116/170 (68%), Positives = 131/170 (77%)
 Frame = +3

Query: 246 LLEQALMEANREREKSILKGTAYSVSSPSHSDTGIDDNISETSDAELCCICFDQVCTIEV 425
           LLE+ALMEAN+EREK+ILKGT YS  SPS SD G+DDN+SE SD E+CCICFDQ+CTIEV
Sbjct: 274 LLERALMEANKEREKNILKGTDYSPPSPSQSDAGMDDNMSEVSDTEVCCICFDQLCTIEV 333

Query: 426 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSSITQLXXXXXXXXXXXXXXXLA 605
           QDCGHQMCA C LALCCHNKPNPTT     PVCPFCRS+I QL               L 
Sbjct: 334 QDCGHQMCAHCVLALCCHNKPNPTTTSPPEPVCPFCRSNIVQL-QAIKVTKNNDTDSDLH 392

Query: 606 SSNPRKSRRFRNYSEGSSSFKSLAAVGSFGRMGARGLGRVAAENEWVDKP 755
           SS  RK+RR RN+SEGSSSFK L+AV SFG+M  RG GR+AA+NEW+DKP
Sbjct: 393 SSKLRKTRRSRNFSEGSSSFKGLSAVSSFGKMTGRGSGRIAADNEWIDKP 442



 Score = 87.8 bits (216), Expect(2) = 4e-81
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   GSLDCIRELLAWGADRLQRDSSGRIPYTVALKHKHGACAALLNPS 135
           GSLDCIRELLAWGADRL RDS+GRIPYTVAL++ HGACAALLNPS
Sbjct: 206 GSLDCIRELLAWGADRLHRDSTGRIPYTVALRYHHGACAALLNPS 250


>gb|AEW69796.1| Hop-interacting protein THI033 [Solanum lycopersicum]
          Length = 447

 Score =  234 bits (598), Expect(2) = 3e-79
 Identities = 112/170 (65%), Positives = 129/170 (75%)
 Frame = +3

Query: 246 LLEQALMEANREREKSILKGTAYSVSSPSHSDTGIDDNISETSDAELCCICFDQVCTIEV 425
           LLE ALMEAN+EREK+ILKGT YS  SP++SD  +DDNISE ++ E+CCICFDQVCTI+V
Sbjct: 274 LLECALMEANKEREKNILKGTTYSPPSPTNSDNEMDDNISEVNETEICCICFDQVCTIQV 333

Query: 426 QDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSSITQLXXXXXXXXXXXXXXXLA 605
           QDCGHQMCA C LALCCH KPNPTT     PVCPFCRS+I QL               ++
Sbjct: 334 QDCGHQMCAHCVLALCCHKKPNPTTTSPIVPVCPFCRSNIVQLDVIKLEKDDGTSHDIVS 393

Query: 606 SSNPRKSRRFRNYSEGSSSFKSLAAVGSFGRMGARGLGRVAAENEWVDKP 755
            S  RKSRR RN+SEGSSSFK L+AV SFGRM  RG GR+AAENE++DKP
Sbjct: 394 PSKLRKSRRSRNFSEGSSSFKGLSAVSSFGRMVGRGSGRIAAENEYIDKP 443



 Score = 87.4 bits (215), Expect(2) = 3e-79
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = +1

Query: 1   GSLDCIRELLAWGADRLQRDSSGRIPYTVALKHKHGACAALLNPS 135
           GSLDCIRELLAWGA+RLQRD  GRIPYT+AL++KHGACAALLNPS
Sbjct: 206 GSLDCIRELLAWGAERLQRDDLGRIPYTIALRYKHGACAALLNPS 250


Top