BLASTX nr result
ID: Panax21_contig00007437
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00007437
(583 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003594776.1| Bromodomain and WD repeat-containing protein... 90 1e-46
gb|ABN06020.1| Cytochrome cd1-nitrite reductase-like, C-terminal... 90 1e-46
ref|XP_003536869.1| PREDICTED: uncharacterized protein LOC100784... 90 2e-46
ref|NP_199754.2| WD40/YVTN repeat and Bromo-WDR9-I-like domain-c... 97 1e-44
ref|XP_002865733.1| transducin family protein [Arabidopsis lyrat... 97 1e-44
>ref|XP_003594776.1| Bromodomain and WD repeat-containing protein [Medicago truncatula]
gi|355483824|gb|AES65027.1| Bromodomain and WD
repeat-containing protein [Medicago truncatula]
Length = 1844
Score = 89.7 bits (221), Expect(3) = 1e-46
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = -2
Query: 177 FLVEKTRYDAAVNRNWTLGDKCLVWWRDDSENGGSWWEGRIISSKDKSSDFLGSPWERF 1
FLVE+TR+DAA+ RNWT DKC VWW+++ + G+WWEGRI K KSS+F SPWER+
Sbjct: 1648 FLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERY 1706
Score = 77.8 bits (190), Expect(3) = 1e-46
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = -1
Query: 364 WKSFGESIRAVETCLVDDRDYASVPGSGENCCKVTLRFIDFFSTLFGQ*FKLTLPELINF 185
W S E +RAVE C V +Y+ VPGSG++CCK+TL F+D S++ G+ FKLTLPE+ F
Sbjct: 1586 WVSLKEHLRAVEYCRVQSLEYSHVPGSGDSCCKMTLEFLDPNSSVVGKTFKLTLPEVTGF 1645
Query: 184 PDF 176
PDF
Sbjct: 1646 PDF 1648
Score = 65.5 bits (158), Expect(3) = 1e-46
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -3
Query: 506 ARKSNWLLLSEQEDGYRYIPQLADEVMYLRQGHQEYIESSFSYNTGP 366
A K +WLLLS E+G RYIPQ DEV+YLRQGHQEYIE S +GP
Sbjct: 1539 AVKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIEYSRKRESGP 1585
>gb|ABN06020.1| Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 [Medicago
truncatula]
Length = 1826
Score = 89.7 bits (221), Expect(3) = 1e-46
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = -2
Query: 177 FLVEKTRYDAAVNRNWTLGDKCLVWWRDDSENGGSWWEGRIISSKDKSSDFLGSPWERF 1
FLVE+TR+DAA+ RNWT DKC VWW+++ + G+WWEGRI K KSS+F SPWER+
Sbjct: 1630 FLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERY 1688
Score = 77.8 bits (190), Expect(3) = 1e-46
Identities = 35/63 (55%), Positives = 46/63 (73%)
Frame = -1
Query: 364 WKSFGESIRAVETCLVDDRDYASVPGSGENCCKVTLRFIDFFSTLFGQ*FKLTLPELINF 185
W S E +RAVE C V +Y+ VPGSG++CCK+TL F+D S++ G+ FKLTLPE+ F
Sbjct: 1568 WVSLKEHLRAVEYCRVQSLEYSHVPGSGDSCCKMTLEFLDPNSSVVGKTFKLTLPEVTGF 1627
Query: 184 PDF 176
PDF
Sbjct: 1628 PDF 1630
Score = 65.5 bits (158), Expect(3) = 1e-46
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = -3
Query: 506 ARKSNWLLLSEQEDGYRYIPQLADEVMYLRQGHQEYIESSFSYNTGP 366
A K +WLLLS E+G RYIPQ DEV+YLRQGHQEYIE S +GP
Sbjct: 1521 AVKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIEYSRKRESGP 1567
>ref|XP_003536869.1| PREDICTED: uncharacterized protein LOC100784354 [Glycine max]
Length = 1695
Score = 90.1 bits (222), Expect(3) = 2e-46
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = -2
Query: 177 FLVEKTRYDAAVNRNWTLGDKCLVWWRDDSENGGSWWEGRIISSKDKSSDFLGSPWERF 1
F++EKT YD A+ RNW+ DKC+VWWR++ GGSWW+GRII + KS DF SPWER+
Sbjct: 1497 FVIEKTWYDTAMKRNWSSRDKCMVWWRNEDGKGGSWWDGRIIQVQAKSDDFPNSPWERY 1555
Score = 72.4 bits (176), Expect(3) = 2e-46
Identities = 34/63 (53%), Positives = 46/63 (73%)
Frame = -1
Query: 364 WKSFGESIRAVETCLVDDRDYASVPGSGENCCKVTLRFIDFFSTLFGQ*FKLTLPELINF 185
W+ F + A E C V++ +YA +PGSG++CCK+ LRF+D S + G+ FKLTLPELINF
Sbjct: 1436 WRLF-VGLGASEICKVEELEYAELPGSGDSCCKLKLRFVDPSSCVHGKSFKLTLPELINF 1494
Query: 184 PDF 176
DF
Sbjct: 1495 TDF 1497
Score = 70.1 bits (170), Expect(3) = 2e-46
Identities = 33/52 (63%), Positives = 39/52 (75%)
Frame = -3
Query: 503 RKSNWLLLSEQEDGYRYIPQLADEVMYLRQGHQEYIESSFSYNTGPLEIIWR 348
+K +WL+LSE E+GYRYIPQL DEV+Y RQGHQEYIES +GP WR
Sbjct: 1390 KKLSWLMLSELEEGYRYIPQLGDEVVYFRQGHQEYIESYSLSESGP----WR 1437
>ref|NP_199754.2| WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein
[Arabidopsis thaliana] gi|332008427|gb|AED95810.1|
WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing
protein [Arabidopsis thaliana]
Length = 1677
Score = 97.1 bits (240), Expect(3) = 1e-44
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = -2
Query: 177 FLVEKTRYDAAVNRNWTLGDKCLVWWRDDSENGGSWWEGRIISSKDKSSDFLGSPWERF 1
FLVE++RY+AA+ RNWT DKC VWWRD+ E GSWWEGRI++ K KS DF SPWER+
Sbjct: 1481 FLVERSRYEAAIQRNWTCRDKCKVWWRDEGEEDGSWWEGRILAVKPKSPDFPDSPWERY 1539
Score = 73.9 bits (180), Expect(3) = 1e-44
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = -1
Query: 364 WKSF-GESIRAVETCLVDDRDYASVPGSGENCCKVTLRFIDFFSTLFGQ*FKLTLPELIN 188
W S G +I+AVE C V+ +YA++PGSG++CCK+ L+ ID S +F + FKLTLPE++
Sbjct: 1418 WTSIKGGNIKAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEVFNKAFKLTLPEVVT 1477
Query: 187 FPDF 176
FPDF
Sbjct: 1478 FPDF 1481
Score = 55.5 bits (132), Expect(3) = 1e-44
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = -3
Query: 494 NWLLLSEQEDGYRYIPQLADEVMYLRQGHQEYIESSFSYNTGP 366
+WL LS E+G RYIPQ+ DEV YLRQGHQEY+ S P
Sbjct: 1375 SWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLNFSSLREVAP 1417
>ref|XP_002865733.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297311568|gb|EFH41992.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1662
Score = 97.1 bits (240), Expect(3) = 1e-44
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = -2
Query: 177 FLVEKTRYDAAVNRNWTLGDKCLVWWRDDSENGGSWWEGRIISSKDKSSDFLGSPWERF 1
FLVE++RY+AA+ RNWT DKC VWWRD+ E GSWWEGRI++ K KS DF SPWER+
Sbjct: 1466 FLVERSRYEAAIQRNWTCRDKCKVWWRDEGEEDGSWWEGRILAVKPKSPDFPDSPWERY 1524
Score = 73.9 bits (180), Expect(3) = 1e-44
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = -1
Query: 364 WKSF-GESIRAVETCLVDDRDYASVPGSGENCCKVTLRFIDFFSTLFGQ*FKLTLPELIN 188
W S G +I+AVE C V+ +YA++PGSG++CCK+ L+ ID S +F + FKLTLPE++
Sbjct: 1403 WTSIKGGNIKAVEICKVESLEYATLPGSGDSCCKMILKVIDPNSEVFNKAFKLTLPEVVT 1462
Query: 187 FPDF 176
FPDF
Sbjct: 1463 FPDF 1466
Score = 55.5 bits (132), Expect(3) = 1e-44
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = -3
Query: 494 NWLLLSEQEDGYRYIPQLADEVMYLRQGHQEYIESSFSYNTGP 366
+WL LS E+G RYIPQ+ DEV YLRQGHQEY+ S P
Sbjct: 1360 SWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLNFSSLREVAP 1402