BLASTX nr result

ID: Panax21_contig00007418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007418
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260...   275   9e-72
ref|XP_002535466.1| conserved hypothetical protein [Ricinus comm...   249   5e-64
gb|ACV71017.1| UPA17 [Capsicum annuum]                                248   1e-63
ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|2...   246   6e-63
ref|XP_002301140.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59

>ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera]
          Length = 604

 Score =  275 bits (704), Expect = 9e-72
 Identities = 131/159 (82%), Positives = 144/159 (90%)
 Frame = +2

Query: 476 DDWPKNQSERSAISWPDIDMQSDRTQLSISIPMAAADFMSSTSSPTNEKLALSPLRLSRE 655
           DDWPKNQS+R+AISWPDID+QSDRTQLSISIPMA++DFMSSTSSPTN+KL LSPLRLSRE
Sbjct: 419 DDWPKNQSDRTAISWPDIDLQSDRTQLSISIPMASSDFMSSTSSPTNDKLTLSPLRLSRE 478

Query: 656 LDSTQMGLGMNGIINETNQRQASWIPISWENSMGGPLGEVLHSTNNSAGDCNNTSALNLM 835
            D  QMGLG+  ++NE NQRQA+WIPISWE SMGGPLGEVLHSTNN+ GDC N+SALNLM
Sbjct: 479 FDPIQMGLGVGSVLNEPNQRQANWIPISWETSMGGPLGEVLHSTNNNGGDCKNSSALNLM 538

Query: 836 TEGWDSSPRLASSPTGVLQKTTFRSLSNSSAGSSPRTEN 952
           TEGWD SPRL SSPTGVLQKT+F SLSNSSAGSSPR  N
Sbjct: 539 TEGWDGSPRLGSSPTGVLQKTSFGSLSNSSAGSSPRAGN 577



 Score =  100 bits (248), Expect = 7e-19
 Identities = 59/99 (59%), Positives = 71/99 (71%), Gaps = 2/99 (2%)
 Frame = +1

Query: 40  GTSNSLGLSNHQLNNLKHCAHTPSASAHINRSFLNKANVGENVQDTTGLSMLSPTIG--L 213
           GTSNSL +++HQ+ NL   A  PSA+  INR FLNK NVGE +Q+T GLS+LS TI    
Sbjct: 295 GTSNSLAIAHHQIKNLHPGASNPSAATPINRIFLNKENVGERMQETQGLSILSSTIDQKS 354

Query: 214 KEHQFSSQKQQNPYQVSSRTEFGLVCSDSLLNPFQKSSS 330
           KE+QFS  KQQ PY+ SSR  FGLV S+SLL+   KSSS
Sbjct: 355 KENQFSLPKQQIPYEESSRAGFGLVPSNSLLS---KSSS 390


>ref|XP_002535466.1| conserved hypothetical protein [Ricinus communis]
           gi|223523019|gb|EEF26917.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 352

 Score =  249 bits (637), Expect = 5e-64
 Identities = 121/160 (75%), Positives = 142/160 (88%), Gaps = 1/160 (0%)
 Frame = +2

Query: 476 DDWPKNQSERSAISWPDIDMQSDRTQLSISIPMAA-ADFMSSTSSPTNEKLALSPLRLSR 652
           DDWPK+QS+RSA+SWP +D+QSDRTQLSISIP+   AD+MSSTSSP NEK+ LSPLRLSR
Sbjct: 167 DDWPKSQSDRSAVSWPQLDVQSDRTQLSISIPIGHHADYMSSTSSPNNEKVTLSPLRLSR 226

Query: 653 ELDSTQMGLGMNGIINETNQRQASWIPISWENSMGGPLGEVLHSTNNSAGDCNNTSALNL 832
           +LD  QMGLG+  +IN+ NQRQA+WIPISWE S+GGPLGEVLH+T+NSA +C ++SALNL
Sbjct: 227 DLDPIQMGLGVGSVINDQNQRQANWIPISWETSIGGPLGEVLHNTSNSA-ECKSSSALNL 285

Query: 833 MTEGWDSSPRLASSPTGVLQKTTFRSLSNSSAGSSPRTEN 952
           MTEGWDSSP++ SSPTGVLQKTTF SLSNSS GSSPR EN
Sbjct: 286 MTEGWDSSPQVGSSPTGVLQKTTFASLSNSSGGSSPRAEN 325



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
 Frame = +1

Query: 109 SASAHINRSFLNKANVGENVQDTTGLSMLSPTIGLKEHQFSSQKQQNPYQV---SSRTEF 279
           SA+  ++R FLNK  VGE +QD+ GLSML+  + LK        +++P+ V   SS+ EF
Sbjct: 69  SAATSLSRIFLNKEKVGERLQDSPGLSMLTSQVDLK-------SKESPFLVSKESSQIEF 121

Query: 280 GLVCSDSLLNPFQKSS 327
           GLV SDSLLNP Q SS
Sbjct: 122 GLVNSDSLLNPSQNSS 137


>gb|ACV71017.1| UPA17 [Capsicum annuum]
          Length = 596

 Score =  248 bits (634), Expect = 1e-63
 Identities = 121/160 (75%), Positives = 139/160 (86%)
 Frame = +2

Query: 476 DDWPKNQSERSAISWPDIDMQSDRTQLSISIPMAAADFMSSTSSPTNEKLALSPLRLSRE 655
           DDWPKNQS++S +SWPDID+QSD TQLSISIP+  +DFMSSTSSP N+KL  S  R SRE
Sbjct: 412 DDWPKNQSDQSNVSWPDIDLQSDPTQLSISIPVVTSDFMSSTSSPANDKLTASSHR-SRE 470

Query: 656 LDSTQMGLGMNGIINETNQRQASWIPISWENSMGGPLGEVLHSTNNSAGDCNNTSALNLM 835
            ++TQMGLG+  II+E NQRQ SWIPISWE+SMGGPLGEVLHSTN+S+GDC N SALNLM
Sbjct: 471 HEATQMGLGIGTIISEHNQRQGSWIPISWESSMGGPLGEVLHSTNSSSGDCKNNSALNLM 530

Query: 836 TEGWDSSPRLASSPTGVLQKTTFRSLSNSSAGSSPRTENN 955
           TEGWD SPR+ SSPTGVLQK++F SLSNSSAGSSPR EN+
Sbjct: 531 TEGWDRSPRMGSSPTGVLQKSSFGSLSNSSAGSSPRAENS 570



 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = +1

Query: 43  TSNSLGLSNH-QLNNLKHCAHTPSA-SAHINRSFLNKANVGENVQDTTGLSMLSPTIGLK 216
           +SNSL LS+H QL NL+     PS  S ++ RS+  K N GE   D  G +++SP++  K
Sbjct: 290 SSNSLNLSHHSQLCNLQPAVTNPSTTSPYLERSYTAKENFGERYSDMKGSTIVSPSV--K 347

Query: 217 EHQFSSQKQQNPYQVSSRTEFGLVCSDSLLNPFQKSSS 330
           E Q+   K+QN Y V+SR EFGLVC+DSL+NP  K SS
Sbjct: 348 EPQY---KEQNLYGVTSRAEFGLVCADSLINPLNKKSS 382


>ref|XP_002320016.1| predicted protein [Populus trichocarpa] gi|222860789|gb|EEE98331.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  246 bits (628), Expect = 6e-63
 Identities = 122/164 (74%), Positives = 138/164 (84%), Gaps = 5/164 (3%)
 Frame = +2

Query: 476 DDWPKNQSERSAISWPDIDMQSDRTQLSISIPMAAADFMSSTSSPTNEKLALSPLRLSRE 655
           DDWPK+QS+RSA+SWP++D QS+RTQLSISIPMA ADFMSSTSSP NEK+ LSPLRLSRE
Sbjct: 97  DDWPKSQSDRSAVSWPELDQQSERTQLSISIPMAPADFMSSTSSPNNEKVTLSPLRLSRE 156

Query: 656 LDSTQMGLGM----NGIINETNQRQASWIPISWENSMGGPLGEVLHST-NNSAGDCNNTS 820
            D  QMGLG+     GI NE NQRQA+WIPISW  SMGGPLGEVLH+T NN+A +C  TS
Sbjct: 157 FDPIQMGLGVGGGGGGIANEPNQRQANWIPISWGTSMGGPLGEVLHNTNNNAAAECKTTS 216

Query: 821 ALNLMTEGWDSSPRLASSPTGVLQKTTFRSLSNSSAGSSPRTEN 952
           +LNLMT  WD+SPR+ SSPTGVLQK+ F SLSNSSAGSSPR EN
Sbjct: 217 SLNLMTYRWDNSPRIGSSPTGVLQKSAFASLSNSSAGSSPRAEN 260



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 41/67 (61%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = +1

Query: 136 FLNKANVGENVQDTTGLSMLSPTIGLK--EHQFSSQKQQNPYQVSSRTEFGLVCSDSLLN 309
           FL K NVGE  QD T LSML   + LK  E  F   KQQN Y  S R EFGLV SDSLLN
Sbjct: 2   FLTKENVGERTQDATALSMLRSNMDLKSKETPFFISKQQNSYGESLRNEFGLVTSDSLLN 61

Query: 310 PFQKSSS 330
             QKSSS
Sbjct: 62  HSQKSSS 68


>ref|XP_002301140.1| predicted protein [Populus trichocarpa] gi|222842866|gb|EEE80413.1|
           predicted protein [Populus trichocarpa]
          Length = 605

 Score =  235 bits (600), Expect = 1e-59
 Identities = 116/162 (71%), Positives = 137/162 (84%), Gaps = 3/162 (1%)
 Frame = +2

Query: 476 DDWPKNQSERSAISWPDIDMQSDRTQLSISIPMAAADFMSSTSSPTNEKLALSPLRLSRE 655
           DD PK+ S+RSA++WP +D+QS+RTQLSISIPMA ADF+SSTSS  NEK++LSPLRLSRE
Sbjct: 419 DDCPKSHSDRSAVAWPGLDLQSERTQLSISIPMAPADFVSSTSSSNNEKISLSPLRLSRE 478

Query: 656 LDSTQMGLGM--NGIINETNQRQASWIPISWENSMGGPLGEVLHSTNNSA-GDCNNTSAL 826
            D  +MGLG+    + NE NQRQA+WIPISWE SMGGPLGEVLH+TNN+A  +C N S+L
Sbjct: 479 FDPIKMGLGVGAGSVANEPNQRQANWIPISWETSMGGPLGEVLHNTNNNATAECKNESSL 538

Query: 827 NLMTEGWDSSPRLASSPTGVLQKTTFRSLSNSSAGSSPRTEN 952
           NLMTE WD+SPR+ SSPTGVLQK+ F SLSNSSAGSSPR EN
Sbjct: 539 NLMTERWDNSPRVGSSPTGVLQKSAFASLSNSSAGSSPRAEN 580



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 42/76 (55%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = +1

Query: 109 SASAHINRSFLNKANVGENVQDTTGLSMLSPTIGLK--EHQFSSQKQQNPYQVSSRTEFG 282
           SA+  ++R FL   NVGE +QD +GLSML  +I LK  E  F   KQQN Y  S + EF 
Sbjct: 315 SATNTLSRVFLATENVGERMQDASGLSMLPSSIDLKSKETPFFISKQQNSYGESLQNEFA 374

Query: 283 LVCSDSLLNPFQKSSS 330
           LV SDSLLN  QKSSS
Sbjct: 375 LVTSDSLLNHSQKSSS 390


Top