BLASTX nr result

ID: Panax21_contig00007413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007413
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]   129   5e-28
ref|XP_002514063.1| conserved hypothetical protein [Ricinus comm...   119   6e-25
ref|XP_002326114.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24
gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]      116   4e-24
gb|ABK94669.1| unknown [Populus trichocarpa]                          116   4e-24

>emb|CAN70428.1| hypothetical protein VITISV_037530 [Vitis vinifera]
          Length = 456

 Score =  129 bits (324), Expect = 5e-28
 Identities = 77/122 (63%), Positives = 84/122 (68%), Gaps = 6/122 (4%)
 Frame = -2

Query: 489 RLTGSKLETPITAPKIAASTIPPAVMLSKKFLSDGETPEAASATSGTTMEAVRAAAVNPV 310
           RLTGSKL TPITAP IA  T PPA MLS+KFL DGE PEAASA SG+TMEAV AAAV PV
Sbjct: 267 RLTGSKLATPITAPTIAPRTTPPATMLSRKFLRDGEXPEAASAASGSTMEAVNAAAVRPV 326

Query: 309 IAFSFREAFT---LKLPTAFDATIAFEGPTGNGLKNASEPG---TFFWLVEVIGIAMETA 148
            AFS REAFT   L L   F AT  F+G T +G K ASE G   + F L EV  IA+ET 
Sbjct: 327 XAFSLREAFTSSRLPLDFGFTATAFFDGFTCSGWKKASEVGLWSSLFXLAEVSRIAIETL 386

Query: 147 EV 142
            +
Sbjct: 387 AI 388


>ref|XP_002514063.1| conserved hypothetical protein [Ricinus communis]
           gi|223546519|gb|EEF48017.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score =  119 bits (298), Expect = 6e-25
 Identities = 67/109 (61%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = +2

Query: 167 PITSTSQKKVPGSDAFFKPLPVGPSKAMVASKAVGSFKVNASLKEKAITGXXXXXXXXSM 346
           PITS SQKKVP S+AFFKPLP+  SKA++ASK+ G F+V ASLKEKAITG        SM
Sbjct: 12  PITSASQKKVPSSEAFFKPLPLRQSKAVMASKSNGKFQVKASLKEKAITGLTAAALTASM 71

Query: 347 VVPDVAEAA-SGVSPSLKNFLLSITXXXXXXXXXXXXXXXXSNFDPVKR 490
           V+P+VAEAA SGVSPSLKNFLLSI                 +NFDPVKR
Sbjct: 72  VIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDPVKR 120


>ref|XP_002326114.1| predicted protein [Populus trichocarpa] gi|222833307|gb|EEE71784.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  117 bits (294), Expect = 2e-24
 Identities = 64/110 (58%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
 Frame = +2

Query: 167 PITSTSQKKVPGSDAFFKPLPVGPSKAMVASKAVGSFKVNASLKEKAITGXXXXXXXXSM 346
           P+T  SQK++P S+AFFKPLP  PSKAM ASK+ G F+V ASLKEK +TG        SM
Sbjct: 12  PLTYASQKRIPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASM 71

Query: 347 VVPDVAEAA-SGVSPSLKNFLLSITXXXXXXXXXXXXXXXXSNFDPVKRG 493
           V+PDVAEAA +G SPSLKNFLLSI                 SNFDPVKRG
Sbjct: 72  VIPDVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKRG 121


>gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 121

 Score =  116 bits (291), Expect = 4e-24
 Identities = 64/110 (58%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
 Frame = +2

Query: 167 PITSTSQKKVPGSDAFFKPLPVGPSKAMVASKAVGSFKVNASLKEKAITGXXXXXXXXSM 346
           P+T  SQK+VP S+AFFKPLP  PSKAM ASK+ G F+V ASLKEK +TG        SM
Sbjct: 12  PLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASM 71

Query: 347 VVPDVAEAA-SGVSPSLKNFLLSITXXXXXXXXXXXXXXXXSNFDPVKRG 493
           V+P+VAEAA +G SPSLKNFLLSI                 SNFDPVKRG
Sbjct: 72  VIPEVAEAAGAGTSPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKRG 121


>gb|ABK94669.1| unknown [Populus trichocarpa]
          Length = 121

 Score =  116 bits (291), Expect = 4e-24
 Identities = 64/110 (58%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
 Frame = +2

Query: 167 PITSTSQKKVPGSDAFFKPLPVGPSKAMVASKAVGSFKVNASLKEKAITGXXXXXXXXSM 346
           P+T  SQK+VP S+AFFKPLP  PSKAM ASK+ G F+V ASLKEK +TG        SM
Sbjct: 12  PLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVTGLTAGALTASM 71

Query: 347 VVPDVAEAA-SGVSPSLKNFLLSITXXXXXXXXXXXXXXXXSNFDPVKRG 493
           V+P+VAEAA +G SPSLKNFLLSI                 SNFDPVKRG
Sbjct: 72  VIPEVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKRG 121


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