BLASTX nr result

ID: Panax21_contig00007389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007389
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001233946.1| alpha-1,4-fucosyltransferase [Solanum lycope...   247   1e-63
ref|XP_002269211.1| PREDICTED: alpha-(1,4)-fucosyltransferase [V...   246   3e-63
ref|XP_002325549.1| predicted protein [Populus trichocarpa] gi|2...   241   7e-62
ref|XP_002327342.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58
emb|CAI70374.1| alpha 1,4 fucosyltransferase [Populus tremula x ...   229   3e-58

>ref|NP_001233946.1| alpha-1,4-fucosyltransferase [Solanum lycopersicum]
           gi|18477220|emb|CAC85740.1| alpha-1,4-fucosyltransferase
           [Solanum lycopersicum]
          Length = 413

 Score =  247 bits (630), Expect = 1e-63
 Identities = 123/181 (67%), Positives = 146/181 (80%), Gaps = 8/181 (4%)
 Frame = -1

Query: 521 LKFKSINSIAITIMLGFALLILFFSGFLDFPT-SSPSILSAEHPLLN--SKSGPDPFKDL 351
           ++ KS+N+ AITIMLGF L+ILFFSGFLDFP  +S SI S ++ +L   S S PDPF +L
Sbjct: 1   MQLKSVNTFAITIMLGFTLIILFFSGFLDFPLHTSSSIPSTKNQILTTISVSEPDPFSNL 60

Query: 350 FGAYKKWDSQVGCYQFRQKHLGLMKNGSILSS----LQDVD-GKLECSELKMNHVGVLVK 186
              +KKWDSQVGC +FR +H GL+ NG +L S    LQ+VD G+L+C+ELKM+HV VLVK
Sbjct: 61  LSTFKKWDSQVGCAKFRGEHKGLLGNGLLLDSSSGSLQNVDDGELKCNELKMDHVSVLVK 120

Query: 185 GWTWIPDNLDNLYACRCGLSCLWTKSSVLVDKPDVLLFETTTPPFQRRNGDPLRVYMDLE 6
           GWTWIPDNLDNLY+CRCGLSCLWTKSSV+ DKPD LLFET TPP +RR GDPLRVYMDLE
Sbjct: 121 GWTWIPDNLDNLYSCRCGLSCLWTKSSVVADKPDALLFETATPPVERRRGDPLRVYMDLE 180

Query: 5   A 3
           A
Sbjct: 181 A 181


>ref|XP_002269211.1| PREDICTED: alpha-(1,4)-fucosyltransferase [Vitis vinifera]
           gi|147812436|emb|CAN67769.1| hypothetical protein
           VITISV_039237 [Vitis vinifera]
           gi|296081071|emb|CBI18265.3| unnamed protein product
           [Vitis vinifera]
          Length = 403

 Score =  246 bits (627), Expect = 3e-63
 Identities = 118/170 (69%), Positives = 133/170 (78%)
 Frame = -1

Query: 512 KSINSIAITIMLGFALLILFFSGFLDFPTSSPSILSAEHPLLNSKSGPDPFKDLFGAYKK 333
           KS+N++AI  MLGFA LIL F     +P++S SI S       +    DPF+DL GA+KK
Sbjct: 4   KSVNTLAIATMLGFAFLILLFFSSFQYPSASTSIPSLNMSTFLNHHTSDPFRDLLGAFKK 63

Query: 332 WDSQVGCYQFRQKHLGLMKNGSILSSLQDVDGKLECSELKMNHVGVLVKGWTWIPDNLDN 153
           WDSQVGC  FR+ H GL+KNGS  SSLQDVDG L+C  L+M HV +LVKGWTWIPDNLDN
Sbjct: 64  WDSQVGCSSFRETHKGLIKNGS--SSLQDVDGDLDCGVLQMRHVEILVKGWTWIPDNLDN 121

Query: 152 LYACRCGLSCLWTKSSVLVDKPDVLLFETTTPPFQRRNGDPLRVYMDLEA 3
           LY+CRCGLSCLWTKSSVL DKPD LLFETTTPP QRRNGDPLRVYMDLEA
Sbjct: 122 LYSCRCGLSCLWTKSSVLADKPDALLFETTTPPLQRRNGDPLRVYMDLEA 171


>ref|XP_002325549.1| predicted protein [Populus trichocarpa] gi|222862424|gb|EEE99930.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  241 bits (615), Expect = 7e-62
 Identities = 120/178 (67%), Positives = 137/178 (76%), Gaps = 5/178 (2%)
 Frame = -1

Query: 521 LKFKSINSIAITIMLGFALLILFFSGFLDFPTSSPSILSA-EHPLLNSKSGPDPFKDLFG 345
           ++ K +N+  IT+ML F ++ILFFSGFL+FP+ + SI S  + P    K+ PDPF DLF 
Sbjct: 1   MQLKPLNTYTITLMLFFTIIILFFSGFLEFPSIATSITSPIKDPNFPVKTTPDPFTDLFV 60

Query: 344 AYKKWDSQVGCYQFRQKHLGLMKNGSI----LSSLQDVDGKLECSELKMNHVGVLVKGWT 177
           A+KKWDSQVGC QFR+KH  L   GS      +SLQ VDG + CSELKM HV VLVKGWT
Sbjct: 61  AFKKWDSQVGCVQFREKHKNLGSFGSKGTNGSASLQVVDGDVGCSELKMEHVNVLVKGWT 120

Query: 176 WIPDNLDNLYACRCGLSCLWTKSSVLVDKPDVLLFETTTPPFQRRNGDPLRVYMDLEA 3
           WIP NLDNLY+C CGLSCLWTKSSVL DKPD LLFETTTPP QRRNGDPLRVYMDLEA
Sbjct: 121 WIPGNLDNLYSCHCGLSCLWTKSSVLADKPDALLFETTTPPLQRRNGDPLRVYMDLEA 178


>ref|XP_002327342.1| predicted protein [Populus trichocarpa] gi|222835712|gb|EEE74147.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score =  229 bits (584), Expect = 3e-58
 Identities = 114/178 (64%), Positives = 136/178 (76%), Gaps = 5/178 (2%)
 Frame = -1

Query: 521 LKFKSINSIAITIMLGFALLILFFSGFLDFPTSSPSILSA-EHPLLNSKSGPDPFKDLFG 345
           ++ K +++  IT+ML F ++ILFFSGFL+FP+ + SI S+ +      K+ PDPF DLF 
Sbjct: 1   MQLKPLSTYTITLMLFFTVIILFFSGFLEFPSITTSITSSIKDSNFPIKTAPDPFTDLFI 60

Query: 344 AYKKWDSQVGCYQFRQKHLGLMKNGSILS----SLQDVDGKLECSELKMNHVGVLVKGWT 177
           A+KKWDSQVGC QFR+K+  L   GS  S    S+Q V+G + CSELKM HV VLVKGWT
Sbjct: 61  AFKKWDSQVGCVQFREKYKNLDSFGSKGSNGSVSVQVVNGDVGCSELKMQHVSVLVKGWT 120

Query: 176 WIPDNLDNLYACRCGLSCLWTKSSVLVDKPDVLLFETTTPPFQRRNGDPLRVYMDLEA 3
           WIP NLDN+Y+CRCGLSCLWTKSSVL DKPD LLFET  PP QRRNGDPLRVYMDLEA
Sbjct: 121 WIPSNLDNMYSCRCGLSCLWTKSSVLADKPDALLFETAPPPLQRRNGDPLRVYMDLEA 178


>emb|CAI70374.1| alpha 1,4 fucosyltransferase [Populus tremula x Populus alba]
          Length = 430

 Score =  229 bits (584), Expect = 3e-58
 Identities = 114/178 (64%), Positives = 136/178 (76%), Gaps = 5/178 (2%)
 Frame = -1

Query: 521 LKFKSINSIAITIMLGFALLILFFSGFLDFPTSSPSILSA-EHPLLNSKSGPDPFKDLFG 345
           ++ K +++  IT+ML F ++ILFFSGFL+FP+ + SI S+ +      K+ PDPF DLF 
Sbjct: 1   MQLKPLSTYTITLMLFFTVIILFFSGFLEFPSITTSITSSIKDSNFPIKTAPDPFTDLFI 60

Query: 344 AYKKWDSQVGCYQFRQKHLGLMKNGSILS----SLQDVDGKLECSELKMNHVGVLVKGWT 177
           A+KKWDSQVGC QFR+K+  L   GS  S    S+Q V+G + CSELKM HV VLVKGWT
Sbjct: 61  AFKKWDSQVGCVQFREKYKNLDSFGSKGSNGSVSVQVVNGDVGCSELKMQHVSVLVKGWT 120

Query: 176 WIPDNLDNLYACRCGLSCLWTKSSVLVDKPDVLLFETTTPPFQRRNGDPLRVYMDLEA 3
           WIP NLDN+Y+CRCGLSCLWTKSSVL DKPD LLFET  PP QRRNGDPLRVYMDLEA
Sbjct: 121 WIPSNLDNMYSCRCGLSCLWTKSSVLADKPDALLFETAPPPLQRRNGDPLRVYMDLEA 178


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