BLASTX nr result
ID: Panax21_contig00007383
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00007383 (748 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 39 5e-06 dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japon... 39 5e-06 gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indi... 39 5e-06 tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea m... 39 5e-06 tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea m... 39 5e-06 >ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis] gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis] Length = 1280 Score = 38.5 bits (88), Expect(2) = 5e-06 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = -2 Query: 234 GLITPYEGQRAYIVNYIS 181 G+ITPYEGQRAYIVNY+S Sbjct: 818 GVITPYEGQRAYIVNYMS 835 Score = 37.7 bits (86), Expect(2) = 5e-06 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -1 Query: 280 MGQEEISASGTSYLNRTD 227 MGQEEISASGTSYLNRT+ Sbjct: 779 MGQEEISASGTSYLNRTE 796 >dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group] gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] Length = 1277 Score = 38.5 bits (88), Expect(2) = 5e-06 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = -2 Query: 234 GLITPYEGQRAYIVNYIS 181 G+ITPYEGQRAYIVNY+S Sbjct: 835 GVITPYEGQRAYIVNYMS 852 Score = 37.7 bits (86), Expect(2) = 5e-06 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -1 Query: 280 MGQEEISASGTSYLNRTD 227 MGQEEISASGTSYLNRT+ Sbjct: 796 MGQEEISASGTSYLNRTE 813 >gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group] Length = 1277 Score = 38.5 bits (88), Expect(2) = 5e-06 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = -2 Query: 234 GLITPYEGQRAYIVNYIS 181 G+ITPYEGQRAYIVNY+S Sbjct: 835 GVITPYEGQRAYIVNYMS 852 Score = 37.7 bits (86), Expect(2) = 5e-06 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -1 Query: 280 MGQEEISASGTSYLNRTD 227 MGQEEISASGTSYLNRT+ Sbjct: 796 MGQEEISASGTSYLNRTE 813 >tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays] Length = 1273 Score = 38.5 bits (88), Expect(2) = 5e-06 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = -2 Query: 234 GLITPYEGQRAYIVNYIS 181 G+ITPYEGQRAYIVNY+S Sbjct: 829 GVITPYEGQRAYIVNYMS 846 Score = 37.7 bits (86), Expect(2) = 5e-06 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -1 Query: 280 MGQEEISASGTSYLNRTD 227 MGQEEISASGTSYLNRT+ Sbjct: 790 MGQEEISASGTSYLNRTE 807 >tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays] Length = 1272 Score = 38.5 bits (88), Expect(2) = 5e-06 Identities = 16/18 (88%), Positives = 18/18 (100%) Frame = -2 Query: 234 GLITPYEGQRAYIVNYIS 181 G+ITPYEGQRAYIVNY+S Sbjct: 829 GVITPYEGQRAYIVNYMS 846 Score = 37.7 bits (86), Expect(2) = 5e-06 Identities = 17/18 (94%), Positives = 18/18 (100%) Frame = -1 Query: 280 MGQEEISASGTSYLNRTD 227 MGQEEISASGTSYLNRT+ Sbjct: 790 MGQEEISASGTSYLNRTE 807