BLASTX nr result

ID: Panax21_contig00007383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007383
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati...    39   5e-06
dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japon...    39   5e-06
gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indi...    39   5e-06
tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea m...    39   5e-06
tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea m...    39   5e-06

>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
           gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
           protein, putative [Ricinus communis]
          Length = 1280

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -2

Query: 234 GLITPYEGQRAYIVNYIS 181
           G+ITPYEGQRAYIVNY+S
Sbjct: 818 GVITPYEGQRAYIVNYMS 835



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 280 MGQEEISASGTSYLNRTD 227
           MGQEEISASGTSYLNRT+
Sbjct: 779 MGQEEISASGTSYLNRTE 796


>dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
           gi|222637078|gb|EEE67210.1| hypothetical protein
           OsJ_24327 [Oryza sativa Japonica Group]
          Length = 1277

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -2

Query: 234 GLITPYEGQRAYIVNYIS 181
           G+ITPYEGQRAYIVNY+S
Sbjct: 835 GVITPYEGQRAYIVNYMS 852



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 280 MGQEEISASGTSYLNRTD 227
           MGQEEISASGTSYLNRT+
Sbjct: 796 MGQEEISASGTSYLNRTE 813


>gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
          Length = 1277

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -2

Query: 234 GLITPYEGQRAYIVNYIS 181
           G+ITPYEGQRAYIVNY+S
Sbjct: 835 GVITPYEGQRAYIVNYMS 852



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 280 MGQEEISASGTSYLNRTD 227
           MGQEEISASGTSYLNRT+
Sbjct: 796 MGQEEISASGTSYLNRTE 813


>tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
          Length = 1273

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -2

Query: 234 GLITPYEGQRAYIVNYIS 181
           G+ITPYEGQRAYIVNY+S
Sbjct: 829 GVITPYEGQRAYIVNYMS 846



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 280 MGQEEISASGTSYLNRTD 227
           MGQEEISASGTSYLNRT+
Sbjct: 790 MGQEEISASGTSYLNRTE 807


>tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
          Length = 1272

 Score = 38.5 bits (88), Expect(2) = 5e-06
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -2

Query: 234 GLITPYEGQRAYIVNYIS 181
           G+ITPYEGQRAYIVNY+S
Sbjct: 829 GVITPYEGQRAYIVNYMS 846



 Score = 37.7 bits (86), Expect(2) = 5e-06
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = -1

Query: 280 MGQEEISASGTSYLNRTD 227
           MGQEEISASGTSYLNRT+
Sbjct: 790 MGQEEISASGTSYLNRTE 807


Top