BLASTX nr result

ID: Panax21_contig00007379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007379
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853...   219   3e-55
ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|2...   198   5e-49
gb|AFW67860.1| hypothetical protein ZEAMMB73_897306 [Zea mays]        164   1e-38
ref|NP_001131744.1| uncharacterized protein LOC100193110 [Zea ma...   164   1e-38
ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845...   159   4e-37

>ref|XP_003633737.1| PREDICTED: uncharacterized protein LOC100853960 [Vitis vinifera]
          Length = 344

 Score =  219 bits (558), Expect = 3e-55
 Identities = 120/195 (61%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
 Frame = +2

Query: 26  MDSTPTPSTHQ--PPFISIKSSPRKLPIKRKAXXXXXXXXXXXXK--LEYSSTTTADHGG 193
           MDSTPTP   Q   P  S K+S RKLPIKRK                L   + +TAD   
Sbjct: 1   MDSTPTPPQPQLATPHFSPKASARKLPIKRKTPHPSSSTPSPNPNPNLIPKTESTADDDP 60

Query: 194 DEDDLLRPPPFKFHRIWTEPDEIRFLQGLLDCTSESLSFPRDLNVFFNRFSNTMSQPYTK 373
           D+    +  PFKFHRIWTEPDEIRFL+GLLDC+S+ LSFPRDL++F+ RFS TMSQPY+K
Sbjct: 61  DDSGNTKTLPFKFHRIWTEPDEIRFLRGLLDCSSQDLSFPRDLHIFYARFSQTMSQPYSK 120

Query: 374 SQLSEKLRRLRKKFRVISARLAKGLHKSLLSPHDRALYELSEQLWHPDYSSTSPFGGG-S 550
           SQLSEKLRRLRKKFRVISARLA+GLH + LSPHDRAL++LS++LWHPDYSS SPF    S
Sbjct: 121 SQLSEKLRRLRKKFRVISARLARGLHPAQLSPHDRALFDLSKRLWHPDYSSASPFNNNLS 180

Query: 551 NSKIPVKISNLVGVK 595
           N       S LVGVK
Sbjct: 181 NICGKKSKSTLVGVK 195


>ref|XP_002305861.1| predicted protein [Populus trichocarpa] gi|222848825|gb|EEE86372.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  198 bits (504), Expect = 5e-49
 Identities = 110/189 (58%), Positives = 132/189 (69%), Gaps = 12/189 (6%)
 Frame = +2

Query: 26  MDSTPTPSTHQPPFISIKSSPRKLPIKRKAXXXXXXXXXXXXKLEYSSTTTADHGGDE-- 199
           MDSTP P  H P   S  SS  KLPIKRK             KLE SSTTT      +  
Sbjct: 1   MDSTPVPQ-HIPFKPSSSSSASKLPIKRKTPDSLHHHHLLSPKLETSSTTTPTTTNPDAI 59

Query: 200 -----DDLLRPPPFKFHRIWTEPDEIRFLQGLLDCTSESLSFPRDLNVFFNRFSNTMSQP 364
                +   +PPPFKFHRIW+EPDEI FLQGLL  +S+ LSFP+DL  F++RFSN+MSQP
Sbjct: 60  STPTTNSESKPPPFKFHRIWSEPDEISFLQGLLSSSSQGLSFPKDLPFFYDRFSNSMSQP 119

Query: 365 YTKSQLSEKLRRLRKKFRVISARLAK-GLHKSLLSPHDRALYELSEQLWHPDYSSTSPFG 541
           YTKSQLSEK+RRLRKKFR  S+RLA+ G + SLLSPHDR+L++LS+QLW P+++S+SPFG
Sbjct: 120 YTKSQLSEKMRRLRKKFRSTSSRLARNGFNYSLLSPHDRSLFDLSKQLWSPEFASSSPFG 179

Query: 542 G----GSNS 556
           G    GSNS
Sbjct: 180 GNKSTGSNS 188


>gb|AFW67860.1| hypothetical protein ZEAMMB73_897306 [Zea mays]
          Length = 346

 Score =  164 bits (415), Expect = 1e-38
 Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
 Frame = +2

Query: 20  IAMDSTPTPSTHQPPFISIKSSPRKLPIKRKAXXXXXXXXXXXX-KLEYSSTTTADHGGD 196
           + + S P PS    P     S+PRKLPIKR++               +      A  GG 
Sbjct: 64  VPVPSNPNPSALADPTPPSASAPRKLPIKRRSPRPSSSPPSSSPDSSDPLRAPAAGGGGG 123

Query: 197 EDDLLRPPPFKFHRIWTEPDEIRFLQGLLDCTSESLSFPRDLNVFFNRFSNTMSQPYTKS 376
             D  + PPFKF RIW+E DE+RFLQGLL C ++ L FPRDLNVF++RFS +M QPYT++
Sbjct: 124 GSDKQQQPPFKFQRIWSESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRA 183

Query: 377 QLSEKLRRLRKKFRVISARLAKGLHKSLLSPHDRALYELSEQLWHPDYSSTSPF 538
           QLSEKLRRL+ KFR +SAR+A+GL  + L+PHDR +  L  +LW P  ++TSPF
Sbjct: 184 QLSEKLRRLKNKFRSMSARVAEGLDPARLAPHDRDVLHLCSRLWDPANAATSPF 237


>ref|NP_001131744.1| uncharacterized protein LOC100193110 [Zea mays]
           gi|194692410|gb|ACF80289.1| unknown [Zea mays]
           gi|413933310|gb|AFW67861.1| hypothetical protein
           ZEAMMB73_897306 [Zea mays]
          Length = 380

 Score =  164 bits (415), Expect = 1e-38
 Identities = 85/174 (48%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
 Frame = +2

Query: 20  IAMDSTPTPSTHQPPFISIKSSPRKLPIKRKAXXXXXXXXXXXX-KLEYSSTTTADHGGD 196
           + + S P PS    P     S+PRKLPIKR++               +      A  GG 
Sbjct: 14  VPVPSNPNPSALADPTPPSASAPRKLPIKRRSPRPSSSPPSSSPDSSDPLRAPAAGGGGG 73

Query: 197 EDDLLRPPPFKFHRIWTEPDEIRFLQGLLDCTSESLSFPRDLNVFFNRFSNTMSQPYTKS 376
             D  + PPFKF RIW+E DE+RFLQGLL C ++ L FPRDLNVF++RFS +M QPYT++
Sbjct: 74  GSDKQQQPPFKFQRIWSESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRA 133

Query: 377 QLSEKLRRLRKKFRVISARLAKGLHKSLLSPHDRALYELSEQLWHPDYSSTSPF 538
           QLSEKLRRL+ KFR +SAR+A+GL  + L+PHDR +  L  +LW P  ++TSPF
Sbjct: 134 QLSEKLRRLKNKFRSMSARVAEGLDPARLAPHDRDVLHLCSRLWDPANAATSPF 187


>ref|XP_003560789.1| PREDICTED: uncharacterized protein LOC100845859 [Brachypodium
           distachyon]
          Length = 372

 Score =  159 bits (401), Expect = 4e-37
 Identities = 83/175 (47%), Positives = 108/175 (61%)
 Frame = +2

Query: 32  STPTPSTHQPPFISIKSSPRKLPIKRKAXXXXXXXXXXXXKLEYSSTTTADHGGDEDDLL 211
           + P P    PP  +  S+ RKLP+KR++                S  T AD  G      
Sbjct: 26  TAPLPPDLTPPASASASAARKLPVKRRSPPRPSSSPSS------SGPTAADQDGQ----- 74

Query: 212 RPPPFKFHRIWTEPDEIRFLQGLLDCTSESLSFPRDLNVFFNRFSNTMSQPYTKSQLSEK 391
             PPFKF RIW+E DE+RFLQGLL C ++ L FPRDLNVF++RFS +M QPYT+SQLSEK
Sbjct: 75  --PPFKFQRIWSESDELRFLQGLLGCGAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEK 132

Query: 392 LRRLRKKFRVISARLAKGLHKSLLSPHDRALYELSEQLWHPDYSSTSPFGGGSNS 556
           LRRL+ K R +S R+A+GL  + L+PHDR +  L  +LW P  ++TSPF   + S
Sbjct: 133 LRRLKNKHRNVSTRVARGLDPARLAPHDRDVLHLCSRLWDPANAATSPFAASAGS 187


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