BLASTX nr result

ID: Panax21_contig00007359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007359
         (1011 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box pr...   390   e-106
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   390   e-106
ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box pr...   390   e-106
ref|XP_002523077.1| Phytochrome A-associated F-box protein, puta...   380   e-103
ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102

>ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box protein-like [Vitis
           vinifera]
          Length = 330

 Score =  390 bits (1002), Expect = e-106
 Identities = 184/271 (67%), Positives = 207/271 (76%)
 Frame = +2

Query: 2   APPGGWAALHKLAVCCPGLLHAGVLLENSDFGLERELGPDENYQNSKLFHLGQTQTTVSF 181
           +PPGGWAALHKL+VCCPGLLH+GVLLENSDFGLERELGPDE+Y+ +     G  Q TV  
Sbjct: 73  SPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKA-----GSFQITVGD 127

Query: 182 SAPSKVVDNSSHSNVYVSGSDGAWSLYDDLCYDTISNASESQDLINNKXXXXXXXXXXXX 361
           +    V  +S H          +WSL+DDL +DT+ N SE+ D                 
Sbjct: 128 ATTPAVASSSHHDGNSEVSDSCSWSLFDDLYFDTLYNVSETMD--------ETQIGVEVE 179

Query: 362 XXXXKTASDFPVCKRRKVCRSLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 541
               K   D PV K  K CR LRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV
Sbjct: 180 NGAVKVGGDLPVSKTVKSCRPLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 239

Query: 542 HIEEKRNYMLFRGIFKNFKRSRVWRTISDGDRSKIDLNCAFCSCKQTWDLHSAFCLRRVF 721
           H+EEKRNYMLFRG+FKNFKRSRVWRTI+DG+RSK+DLNCAFC CK+TWDLHSAFCLRR F
Sbjct: 240 HVEEKRNYMLFRGVFKNFKRSRVWRTINDGNRSKVDLNCAFCPCKETWDLHSAFCLRRGF 299

Query: 722 GFHDDGDPVVRAYVCENGHVSGAWTDWPLYT 814
           G+HDDG+PVVRAYVCENGHVSGAWT++PLYT
Sbjct: 300 GYHDDGEPVVRAYVCENGHVSGAWTEYPLYT 330


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  390 bits (1002), Expect = e-106
 Identities = 184/271 (67%), Positives = 207/271 (76%)
 Frame = +2

Query: 2    APPGGWAALHKLAVCCPGLLHAGVLLENSDFGLERELGPDENYQNSKLFHLGQTQTTVSF 181
            +PPGGWAALHKL+VCCPGLLH+GVLLENSDFGLERELGPDE+Y+ +     G  Q TV  
Sbjct: 463  SPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKA-----GSFQITVGD 517

Query: 182  SAPSKVVDNSSHSNVYVSGSDGAWSLYDDLCYDTISNASESQDLINNKXXXXXXXXXXXX 361
            +    V  +S H          +WSL+DDL +DT+ N SE+ D                 
Sbjct: 518  ATTPAVASSSHHDGNSEVSDSCSWSLFDDLYFDTLYNVSETMD--------ETQIGVEVE 569

Query: 362  XXXXKTASDFPVCKRRKVCRSLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 541
                K   D PV K  K CR LRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV
Sbjct: 570  NGAVKVGGDLPVSKTVKSCRPLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 629

Query: 542  HIEEKRNYMLFRGIFKNFKRSRVWRTISDGDRSKIDLNCAFCSCKQTWDLHSAFCLRRVF 721
            H+EEKRNYMLFRG+FKNFKRSRVWRTI+DG+RSK+DLNCAFC CK+TWDLHSAFCLRR F
Sbjct: 630  HVEEKRNYMLFRGVFKNFKRSRVWRTINDGNRSKVDLNCAFCPCKETWDLHSAFCLRRGF 689

Query: 722  GFHDDGDPVVRAYVCENGHVSGAWTDWPLYT 814
            G+HDDG+PVVRAYVCENGHVSGAWT++PLYT
Sbjct: 690  GYHDDGEPVVRAYVCENGHVSGAWTEYPLYT 720


>ref|XP_004173063.1| PREDICTED: phytochrome A-associated F-box protein-like [Cucumis
           sativus]
          Length = 379

 Score =  390 bits (1001), Expect = e-106
 Identities = 189/271 (69%), Positives = 213/271 (78%), Gaps = 1/271 (0%)
 Frame = +2

Query: 5   PPGGWAALHKLAVCCPGLLHAGVLLENSDFGLERELGPDENYQNSKLFHLGQTQTTVSFS 184
           P GGWA+LHKLAVCCPGL+H+GVLLENSDFGLERELGPDENY         Q ++  S +
Sbjct: 114 PAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSST 173

Query: 185 APSKV-VDNSSHSNVYVSGSDGAWSLYDDLCYDTISNASESQDLINNKXXXXXXXXXXXX 361
           A  +V  D S+ ++   S SD AWSLYDDL  DT+ N SE+ D+++ +            
Sbjct: 174 ALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFM 233

Query: 362 XXXXKTASDFPVCKRRKVCRSLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 541
                T  +F V KRRK+CRS+RSHLASGVWNLSREQGNKLL SRFRGD LYICDWPGCV
Sbjct: 234 -----TDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCV 288

Query: 542 HIEEKRNYMLFRGIFKNFKRSRVWRTISDGDRSKIDLNCAFCSCKQTWDLHSAFCLRRVF 721
           HIEEKRNYMLFRGIFKNFK S VWRTI DG+R+KIDLNCAFCSCK+TWDLHSAFCLRRVF
Sbjct: 289 HIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVF 348

Query: 722 GFHDDGDPVVRAYVCENGHVSGAWTDWPLYT 814
           G+HDDG+PVVRAYVCENGHVSGAWTD PLYT
Sbjct: 349 GYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 379


>ref|XP_002523077.1| Phytochrome A-associated F-box protein, putative [Ricinus communis]
           gi|223537639|gb|EEF39262.1| Phytochrome A-associated
           F-box protein, putative [Ricinus communis]
          Length = 332

 Score =  380 bits (975), Expect = e-103
 Identities = 182/271 (67%), Positives = 208/271 (76%)
 Frame = +2

Query: 2   APPGGWAALHKLAVCCPGLLHAGVLLENSDFGLERELGPDENYQNSKLFHLGQTQTTVSF 181
           A PGGW++LHKL+VCCPGLLHAG LLE+SDFGLERELGPD+NY  + +     +Q     
Sbjct: 70  AIPGGWSSLHKLSVCCPGLLHAGFLLEHSDFGLERELGPDDNYHKTSVSRTTSSQPPPP- 128

Query: 182 SAPSKVVDNSSHSNVYVSGSDGAWSLYDDLCYDTISNASESQDLINNKXXXXXXXXXXXX 361
             P     + S++N     +D +WSL+DDL YDTI + SES+D+  +             
Sbjct: 129 -PPPGPSSDCSNTNNNTQNNDCSWSLFDDLYYDTIYDVSESEDVNGSADVVSINRDDKTV 187

Query: 362 XXXXKTASDFPVCKRRKVCRSLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCV 541
                      VCKRRK+ RSLRSHLASGVWNLSREQGNKLLASRFRGD LYICDWPGCV
Sbjct: 188 LKGGG------VCKRRKISRSLRSHLASGVWNLSREQGNKLLASRFRGDSLYICDWPGCV 241

Query: 542 HIEEKRNYMLFRGIFKNFKRSRVWRTISDGDRSKIDLNCAFCSCKQTWDLHSAFCLRRVF 721
           H+EEKRNYMLFRGIFKNFKRSRVWRTI+DG+R KIDLNCAFC CK+TWDLHSAFCLRRVF
Sbjct: 242 HMEEKRNYMLFRGIFKNFKRSRVWRTINDGNRRKIDLNCAFCGCKETWDLHSAFCLRRVF 301

Query: 722 GFHDDGDPVVRAYVCENGHVSGAWTDWPLYT 814
           G+HDDG+P+VRAYVCENGHVSGAWTD PLYT
Sbjct: 302 GYHDDGEPIVRAYVCENGHVSGAWTDVPLYT 332


>ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|222844435|gb|EEE81982.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  377 bits (969), Expect = e-102
 Identities = 181/273 (66%), Positives = 202/273 (73%), Gaps = 4/273 (1%)
 Frame = +2

Query: 8   PGGWAALHKLAVCCPGLLHAGVLLENSDFGLERELGPDENYQNSKLFHLGQTQTTVSFSA 187
           PG W+ALHKLAVCCPGLLHAGV LE+SDFGLERELGPD+ +  SK             + 
Sbjct: 72  PGAWSALHKLAVCCPGLLHAGVFLEHSDFGLERELGPDDYFHKSK-------------NT 118

Query: 188 PSKVVDNSSHSNVYVSGSDGAWSLYDDLCYDTISNASESQDLIN----NKXXXXXXXXXX 355
           PS+    +SHS   +   D +WSL+DDL YDT+ N  ESQD        K          
Sbjct: 119 PSQQPQQASHSGSNLDKRDSSWSLFDDLYYDTVYNVYESQDAATVSCEAKEEVIGGNDDK 178

Query: 356 XXXXXXKTASDFPVCKRRKVCRSLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPG 535
                 K      V KRRK+CRSL SHLASGVWNLSREQGNKLLASRFRGDCLYICDWPG
Sbjct: 179 SVDIFVKARGISSVGKRRKICRSLSSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPG 238

Query: 536 CVHIEEKRNYMLFRGIFKNFKRSRVWRTISDGDRSKIDLNCAFCSCKQTWDLHSAFCLRR 715
           C HI EKR+YMLFRGIFKNFK+SRVWRTI DGDRSKIDL+CAFC C++TWDL+SAFCL+R
Sbjct: 239 CAHITEKRSYMLFRGIFKNFKKSRVWRTIHDGDRSKIDLSCAFCGCQETWDLNSAFCLKR 298

Query: 716 VFGFHDDGDPVVRAYVCENGHVSGAWTDWPLYT 814
            FG+HDDG+PVVRAYVCENGHVSGAWTDWPLYT
Sbjct: 299 GFGYHDDGEPVVRAYVCENGHVSGAWTDWPLYT 331


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