BLASTX nr result

ID: Panax21_contig00007353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007353
         (2149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...   224   6e-56
emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]   220   1e-54
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2...   207   1e-50
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...   202   2e-49
ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-49

>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
            vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
            product [Vitis vinifera]
          Length = 450

 Score =  224 bits (572), Expect = 6e-56
 Identities = 107/156 (68%), Positives = 117/156 (75%), Gaps = 14/156 (8%)
 Frame = -2

Query: 1206 VGIDDCPLQYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNTLGLPMRQEEKPCPYYMQTG 1027
            VG  DC   YFLKTGTCKYGS+CKYHHP DRHGAGPV LN +GLPMRQEEKPC YYM+TG
Sbjct: 90   VGQPDCG--YFLKTGTCKYGSTCKYHHPRDRHGAGPVSLNIVGLPMRQEEKPCSYYMRTG 147

Query: 1026 ECKFRIACKFHHPQPASAGTALPVQGPAAYGSTGLLILPSSGLSYAAGLPSWSLQKSTYL 847
             CKF  ACKFHHPQPASAGT LP  GPAA+GSTG  ILPSSGL Y  GLP+WSL ++ Y+
Sbjct: 148  LCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYI 207

Query: 846  SAP--------------PSQGIVPAPGWNTYMGSLS 781
              P              PSQGIVPA GWNTYMG++S
Sbjct: 208  PGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMGNMS 243



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -2

Query: 1197 DDCPLQYFLKTGTCKYGSSCKYHHPPDRHG-AGPVVLNTLGLPMRQEEKPCPYYMQTGEC 1021
            D    +YF+ TG+CKYGS CKYHHP +R        L  LGLP+R  +  C +Y   G C
Sbjct: 286  DQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLC 345

Query: 1020 KFRIACKFHHP 988
            K+   CKF HP
Sbjct: 346  KYGPTCKFDHP 356



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -2

Query: 564 QAVCSYYTMYGLCKYGPTCKYDHPLLGYS 478
           QAVCS+Y +YGLCKYGPTCK+DHPL GYS
Sbjct: 333 QAVCSHYNLYGLCKYGPTCKFDHPLTGYS 361


>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
          Length = 460

 Score =  220 bits (560), Expect = 1e-54
 Identities = 105/152 (69%), Positives = 113/152 (74%), Gaps = 14/152 (9%)
 Frame = -2

Query: 1206 VGIDDCPLQYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNTLGLPMRQEEKPCPYYMQTG 1027
            VG  DC   YFLKTGTCKYGS+CKYHHP DRHGAGPV LN +GLPMRQEEKPC YYM+TG
Sbjct: 69   VGQPDCG--YFLKTGTCKYGSTCKYHHPRDRHGAGPVXLNIVGLPMRQEEKPCSYYMRTG 126

Query: 1026 ECKFRIACKFHHPQPASAGTALPVQGPAAYGSTGLLILPSSGLSYAAGLPSWSLQKSTYL 847
             CKF  ACKFHHPQPASAGT LP  GPAA+GSTG  ILPSSGL Y  GLP+WSL ++ Y+
Sbjct: 127  LCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYI 186

Query: 846  SAP--------------PSQGIVPAPGWNTYM 793
              P              PSQGIVPA GWNTYM
Sbjct: 187  PGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYM 218



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 33/71 (46%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = -2

Query: 1197 DDCPLQYFLKTGTCKYGSSCKYHHPPDRHG-AGPVVLNTLGLPMRQEEKPCPYYMQTGEC 1021
            D    +YF+ TG+CKYGS CKYHHP +R        L  LGLP+R  +  C +Y   G C
Sbjct: 296  DQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLC 355

Query: 1020 KFRIACKFHHP 988
            K+   CKF HP
Sbjct: 356  KYGPTCKFDHP 366



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = -2

Query: 564 QAVCSYYTMYGLCKYGPTCKYDHPLLGYS 478
           QAVCS+Y +YGLCKYGPTCK+DHPL GYS
Sbjct: 343 QAVCSHYNLYGLCKYGPTCKFDHPLTGYS 371


>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
            predicted protein [Populus trichocarpa]
          Length = 450

 Score =  207 bits (526), Expect = 1e-50
 Identities = 97/155 (62%), Positives = 115/155 (74%), Gaps = 15/155 (9%)
 Frame = -2

Query: 1206 VGIDDCPLQYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNTLGLPMRQEEKPCPYYMQTG 1027
            +G  DC   Y++KTGTCKYGS+CKYHHP DR+GAGPV  N LGLPMRQ+EK CPYYM+T 
Sbjct: 92   IGQPDCG--YYIKTGTCKYGSTCKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTR 149

Query: 1026 ECKFRIACKFHHPQPASAGTALPVQGPAAYGSTGLLILPSSGLSYAAGLPSWSLQKS--- 856
             CKF +ACKFHHPQPAS GT+LP+ G AA+GSTG  I+PSSGL Y  GLP+WSL ++   
Sbjct: 150  SCKFGVACKFHHPQPASLGTSLPLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPPY 209

Query: 855  ---TYLSAP---------PSQGIVPAPGWNTYMGS 787
               T+L  P         PSQGIVP PGWNTY+G+
Sbjct: 210  MSGTHLQGPQAYMPVVVSPSQGIVPVPGWNTYVGN 244



 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
 Frame = -2

Query: 1197 DDCPLQYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNTL---GLPMRQEEKPCPYYMQTG 1027
            D    ++F+ +GTCKYGS CKYHHP +R     +  NT+   GLP+R  +  CP Y   G
Sbjct: 287  DQPECRHFMSSGTCKYGSDCKYHHPKER--IAQLATNTMGPFGLPLRPGQAVCPDYSMYG 344

Query: 1026 ECKFRIACKFHHPQPASAGTALPVQGPAAYGSTGLLILPSSGLSYAAGLPSWSLQKSTYL 847
             CKF   C++ HP                        LP+   +Y+  LPS S+  S+ +
Sbjct: 345  ICKFGPTCRYDHP------------------------LPTYPYNYSLSLPSLSMMDSSLV 380

Query: 846  SAP 838
            + P
Sbjct: 381  TYP 383


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
            gi|223531614|gb|EEF33442.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 456

 Score =  202 bits (515), Expect = 2e-49
 Identities = 96/156 (61%), Positives = 110/156 (70%), Gaps = 14/156 (8%)
 Frame = -2

Query: 1206 VGIDDCPLQYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNTLGLPMRQEEKPCPYYMQTG 1027
            VG  DC   Y+LKTGTCKYGS+CKYHHP DR+GAGPV  N +GLPMRQ+EK CPYYM+TG
Sbjct: 97   VGQPDCG--YYLKTGTCKYGSTCKYHHPRDRNGAGPVSFNIVGLPMRQDEKSCPYYMRTG 154

Query: 1026 ECKFRIACKFHHPQPASAGTALPVQGPAAYGSTGLLILPSSGLSYAAGLPSWSLQKSTYL 847
             CKF +ACKFHHPQPA  GT LP  GPAA G      LPSSGL Y  GLP+WSL ++ Y+
Sbjct: 155  SCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSNLPSSGLPYVGGLPTWSLPRAPYV 214

Query: 846  SAP--------------PSQGIVPAPGWNTYMGSLS 781
            S P              PSQG+V A GWNTY+G+LS
Sbjct: 215  SGPRLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLS 250



 Score = 72.4 bits (176), Expect = 5e-10
 Identities = 46/125 (36%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
 Frame = -2

Query: 1197 DDCPLQYFLKTGTCKYGSSCKYHHPPDR------HGAGPVVLNTLGLPMRQEEKPCPYYM 1036
            D    +YF+ TGTCKYGS CKYHHP +R      +  GPV     GLP R  +  C  Y 
Sbjct: 293  DQPECRYFMNTGTCKYGSDCKYHHPKERIAQLATNSIGPV-----GLPSRPGQPICSNYS 347

Query: 1035 QTGECKFRIACKFHHPQPA-SAGTALPVQGPAAYGSTGLLILP---------SSGLSYAA 886
              G CKF   C+F HP      G +L +Q P +   + LL  P          S +S ++
Sbjct: 348  MYGLCKFGPTCRFDHPFTGYPYGYSLSLQ-PLSIIDSSLLSYPRMSPPALSSESPISLSS 406

Query: 885  GLPSW 871
              P W
Sbjct: 407  KFPDW 411


>ref|XP_002320490.1| predicted protein [Populus trichocarpa] gi|222861263|gb|EEE98805.1|
            predicted protein [Populus trichocarpa]
          Length = 446

 Score =  201 bits (512), Expect = 5e-49
 Identities = 94/156 (60%), Positives = 112/156 (71%), Gaps = 14/156 (8%)
 Frame = -2

Query: 1206 VGIDDCPLQYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNTLGLPMRQEEKPCPYYMQTG 1027
            VG  DC   Y+LKTGTCKYGS+CKYHHP DR+GAGPV  N LGLPMRQ+EK CPYYM+T 
Sbjct: 92   VGQPDCG--YYLKTGTCKYGSTCKYHHPRDRNGAGPVSFNALGLPMRQDEKSCPYYMRTR 149

Query: 1026 ECKFRIACKFHHPQPASAGTALPVQGPAAYGSTGLLILPSSGLSYAAGLPSWSLQKSTYL 847
             CKF +ACKFHHPQPAS GT+  + G AA+GSTG  I+PSSGL Y  GLP+WSL ++  +
Sbjct: 150  SCKFGVACKFHHPQPASLGTSFSLTGAAAFGSTGSPIVPSSGLPYVGGLPTWSLPRAPLM 209

Query: 846  S--------------APPSQGIVPAPGWNTYMGSLS 781
            S                PS GI+P PGWNTY+G+L+
Sbjct: 210  SGTNLQGPQAYMPVVVSPSPGIIPVPGWNTYVGNLN 245



 Score = 71.6 bits (174), Expect = 8e-10
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = -2

Query: 1182 QYFLKTGTCKYGSSCKYHHPPDRHGAGPVVLNT---LGLPMRQEEKPCPYYMQTGECKFR 1012
            ++F+ TGTCKYGS CKYHHP +R     +  NT   LGLP R  +  CP Y   G CKF 
Sbjct: 293  RHFMSTGTCKYGSDCKYHHPKER--IAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFG 350

Query: 1011 IACKFHHP 988
              C++ HP
Sbjct: 351  PTCRYDHP 358


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