BLASTX nr result
ID: Panax21_contig00007352
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00007352 (917 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] 102 7e-31 ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin... 102 7e-31 ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu... 99 8e-22 ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2... 93 8e-21 ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 91 1e-19 >emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera] Length = 460 Score = 102 bits (255), Expect(2) = 7e-31 Identities = 45/61 (73%), Positives = 53/61 (86%) Frame = -2 Query: 907 SGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGL 728 SGQV + + HLPERPDQPECR+FM TGSCKYGSDCKY+HP+E+IAQLA ++LGPLGL Sbjct: 278 SGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGL 337 Query: 727 P 725 P Sbjct: 338 P 338 Score = 58.2 bits (139), Expect(2) = 7e-31 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%) Frame = -3 Query: 636 LLGYS-YNYSVNLPTLSMPDPSLFPYQRNLPMIHSYETSPSKS 511 L GYS YNY ++LP LS+ DPSL PYQRN +HS ETSPSKS Sbjct: 367 LTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKS 409 >ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis vinifera] gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera] Length = 450 Score = 102 bits (255), Expect(2) = 7e-31 Identities = 45/61 (73%), Positives = 53/61 (86%) Frame = -2 Query: 907 SGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGL 728 SGQV + + HLPERPDQPECR+FM TGSCKYGSDCKY+HP+E+IAQLA ++LGPLGL Sbjct: 268 SGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGL 327 Query: 727 P 725 P Sbjct: 328 P 328 Score = 58.2 bits (139), Expect(2) = 7e-31 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%) Frame = -3 Query: 636 LLGYS-YNYSVNLPTLSMPDPSLFPYQRNLPMIHSYETSPSKS 511 L GYS YNY ++LP LS+ DPSL PYQRN +HS ETSPSKS Sbjct: 357 LTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKS 399 Score = 57.8 bits (138), Expect = 4e-06 Identities = 26/48 (54%), Positives = 34/48 (70%) Frame = -2 Query: 868 LPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGLP 725 LPER QP+C +F+ TG+CKYGS CKY+HPR++ SL +GLP Sbjct: 86 LPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG-AGPVSLNIVGLP 132 >ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis] gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis] Length = 456 Score = 99.0 bits (245), Expect(2) = 8e-22 Identities = 43/61 (70%), Positives = 53/61 (86%) Frame = -2 Query: 907 SGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGL 728 SGQV + S+LPERPDQPECR+FM TG+CKYGSDCKY+HP+E+IAQLA +S+GP+GL Sbjct: 275 SGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSDCKYHHPKERIAQLATNSIGPVGL 334 Query: 727 P 725 P Sbjct: 335 P 335 Score = 31.6 bits (70), Expect(2) = 8e-22 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = -3 Query: 630 GYSYNYSVNLPTLSMPDPSLFPYQRNLPMIHSYETSPSKS 511 GY Y YS++L LS+ D SL Y R P S E+ S S Sbjct: 366 GYPYGYSLSLQPLSIIDSSLLSYPRMSPPALSSESPISLS 405 >ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1| predicted protein [Populus trichocarpa] Length = 450 Score = 92.8 bits (229), Expect(2) = 8e-21 Identities = 37/52 (71%), Positives = 47/52 (90%) Frame = -2 Query: 880 SVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGLP 725 ++ LPERPDQPECRHFM +G+CKYGSDCKY+HP+E+IAQLA +++GP GLP Sbjct: 278 AIPALPERPDQPECRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLP 329 Score = 34.3 bits (77), Expect(2) = 8e-21 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -3 Query: 627 YSYNYSVNLPTLSMPDPSLFPYQR 556 Y YNYS++LP+LSM D SL Y R Sbjct: 361 YPYNYSLSLPSLSMMDSSLVTYPR 384 >ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 3-like [Vitis vinifera] Length = 324 Score = 90.5 bits (223), Expect(2) = 1e-19 Identities = 41/63 (65%), Positives = 49/63 (77%) Frame = -2 Query: 913 SLSGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPL 734 S +GQV S+ HLPER DQPEC +FM TGSCKY SDCKY+HP+E+IA LA ++LGPL Sbjct: 204 SSNGQVHLLSLSIPHLPERRDQPECXYFMSTGSCKYDSDCKYHHPKERIAXLATNTLGPL 263 Query: 733 GLP 725 LP Sbjct: 264 DLP 266 Score = 32.3 bits (72), Expect(2) = 1e-19 Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -3 Query: 636 LLGYS-YNYSVNLPTLSMPDPSLFPY 562 L GYS YNY ++LP LS+ +PSL P+ Sbjct: 295 LTGYSSYNYCLSLPPLSILEPSLLPF 320