BLASTX nr result

ID: Panax21_contig00007352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007352
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]   102   7e-31
ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containin...   102   7e-31
ref|XP_002528968.1| zinc finger protein, putative [Ricinus commu...    99   8e-22
ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|2...    93   8e-21
ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    91   1e-19

>emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
          Length = 460

 Score =  102 bits (255), Expect(2) = 7e-31
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = -2

Query: 907 SGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGL 728
           SGQV    + + HLPERPDQPECR+FM TGSCKYGSDCKY+HP+E+IAQLA ++LGPLGL
Sbjct: 278 SGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGL 337

Query: 727 P 725
           P
Sbjct: 338 P 338



 Score = 58.2 bits (139), Expect(2) = 7e-31
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -3

Query: 636 LLGYS-YNYSVNLPTLSMPDPSLFPYQRNLPMIHSYETSPSKS 511
           L GYS YNY ++LP LS+ DPSL PYQRN   +HS ETSPSKS
Sbjct: 367 LTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKS 409


>ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
           vinifera] gi|297739220|emb|CBI28871.3| unnamed protein
           product [Vitis vinifera]
          Length = 450

 Score =  102 bits (255), Expect(2) = 7e-31
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = -2

Query: 907 SGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGL 728
           SGQV    + + HLPERPDQPECR+FM TGSCKYGSDCKY+HP+E+IAQLA ++LGPLGL
Sbjct: 268 SGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGL 327

Query: 727 P 725
           P
Sbjct: 328 P 328



 Score = 58.2 bits (139), Expect(2) = 7e-31
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -3

Query: 636 LLGYS-YNYSVNLPTLSMPDPSLFPYQRNLPMIHSYETSPSKS 511
           L GYS YNY ++LP LS+ DPSL PYQRN   +HS ETSPSKS
Sbjct: 357 LTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKS 399



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 26/48 (54%), Positives = 34/48 (70%)
 Frame = -2

Query: 868 LPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGLP 725
           LPER  QP+C +F+ TG+CKYGS CKY+HPR++       SL  +GLP
Sbjct: 86  LPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG-AGPVSLNIVGLP 132


>ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
           gi|223531614|gb|EEF33442.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 456

 Score = 99.0 bits (245), Expect(2) = 8e-22
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = -2

Query: 907 SGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGL 728
           SGQV     + S+LPERPDQPECR+FM TG+CKYGSDCKY+HP+E+IAQLA +S+GP+GL
Sbjct: 275 SGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSDCKYHHPKERIAQLATNSIGPVGL 334

Query: 727 P 725
           P
Sbjct: 335 P 335



 Score = 31.6 bits (70), Expect(2) = 8e-22
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -3

Query: 630 GYSYNYSVNLPTLSMPDPSLFPYQRNLPMIHSYETSPSKS 511
           GY Y YS++L  LS+ D SL  Y R  P   S E+  S S
Sbjct: 366 GYPYGYSLSLQPLSIIDSSLLSYPRMSPPALSSESPISLS 405


>ref|XP_002302855.1| predicted protein [Populus trichocarpa] gi|222844581|gb|EEE82128.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 92.8 bits (229), Expect(2) = 8e-21
 Identities = 37/52 (71%), Positives = 47/52 (90%)
 Frame = -2

Query: 880 SVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPLGLP 725
           ++  LPERPDQPECRHFM +G+CKYGSDCKY+HP+E+IAQLA +++GP GLP
Sbjct: 278 AIPALPERPDQPECRHFMSSGTCKYGSDCKYHHPKERIAQLATNTMGPFGLP 329



 Score = 34.3 bits (77), Expect(2) = 8e-21
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -3

Query: 627 YSYNYSVNLPTLSMPDPSLFPYQR 556
           Y YNYS++LP+LSM D SL  Y R
Sbjct: 361 YPYNYSLSLPSLSMMDSSLVTYPR 384


>ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 3-like [Vitis vinifera]
          Length = 324

 Score = 90.5 bits (223), Expect(2) = 1e-19
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = -2

Query: 913 SLSGQVPPSPASVSHLPERPDQPECRHFMITGSCKYGSDCKYNHPREKIAQLAASSLGPL 734
           S +GQV     S+ HLPER DQPEC +FM TGSCKY SDCKY+HP+E+IA LA ++LGPL
Sbjct: 204 SSNGQVHLLSLSIPHLPERRDQPECXYFMSTGSCKYDSDCKYHHPKERIAXLATNTLGPL 263

Query: 733 GLP 725
            LP
Sbjct: 264 DLP 266



 Score = 32.3 bits (72), Expect(2) = 1e-19
 Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -3

Query: 636 LLGYS-YNYSVNLPTLSMPDPSLFPY 562
           L GYS YNY ++LP LS+ +PSL P+
Sbjct: 295 LTGYSSYNYCLSLPPLSILEPSLLPF 320


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