BLASTX nr result

ID: Panax21_contig00007351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007351
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...   263   3e-68
emb|CBI32382.3| unnamed protein product [Vitis vinifera]              263   3e-68
emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]   263   3e-68
ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   251   1e-64
ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi...   251   2e-64

>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score =  263 bits (673), Expect = 3e-68
 Identities = 123/166 (74%), Positives = 137/166 (82%)
 Frame = -1

Query: 499 MEIAPAVLASHGGVVGGATSASDEALKSSDSATPSSEKENTNNYNVSSKYDDDDEEGDVC 320
           MEIAPAVL +        T+ S ++LK+S S+  S      +      KYD++++EGDVC
Sbjct: 86  MEIAPAVLEAKANENDNPTTVSVDSLKASSSSLSSPRSSPEDETRSPGKYDEEEDEGDVC 145

Query: 319 RICRNPGDVDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAENA 140
           RICRNPGD +NPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK+AFSFSPVYAENA
Sbjct: 146 RICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKYAFSFSPVYAENA 205

Query: 139 PTRLPFHEFVVGIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 2
           P RLPF EFVVG+AMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW
Sbjct: 206 PARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 251


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  263 bits (673), Expect = 3e-68
 Identities = 123/166 (74%), Positives = 137/166 (82%)
 Frame = -1

Query: 499 MEIAPAVLASHGGVVGGATSASDEALKSSDSATPSSEKENTNNYNVSSKYDDDDEEGDVC 320
           MEIAPAVL +        T+ S ++LK+S S+  S      +      KYD++++EGDVC
Sbjct: 1   MEIAPAVLEAKANENDNPTTVSVDSLKASSSSLSSPRSSPEDETRSPGKYDEEEDEGDVC 60

Query: 319 RICRNPGDVDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAENA 140
           RICRNPGD +NPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK+AFSFSPVYAENA
Sbjct: 61  RICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKYAFSFSPVYAENA 120

Query: 139 PTRLPFHEFVVGIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 2
           P RLPF EFVVG+AMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW
Sbjct: 121 PARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 166


>emb|CAN65907.1| hypothetical protein VITISV_004874 [Vitis vinifera]
          Length = 1177

 Score =  263 bits (673), Expect = 3e-68
 Identities = 123/166 (74%), Positives = 137/166 (82%)
 Frame = -1

Query: 499 MEIAPAVLASHGGVVGGATSASDEALKSSDSATPSSEKENTNNYNVSSKYDDDDEEGDVC 320
           MEIAPAVL +        T+ S ++LK+S S+  S      +      KYD++++EGDVC
Sbjct: 1   MEIAPAVLEAKANENDNPTTVSVDSLKASSSSLSSPRSSPEDETRSPGKYDEEEDEGDVC 60

Query: 319 RICRNPGDVDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAENA 140
           RICRNPGD +NPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK+AFSFSPVYAENA
Sbjct: 61  RICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKYAFSFSPVYAENA 120

Query: 139 PTRLPFHEFVVGIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 2
           P RLPF EFVVG+AMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW
Sbjct: 121 PARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 166


>ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Cucumis
           sativus] gi|449495626|ref|XP_004159898.1| PREDICTED: E3
           ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
          Length = 1098

 Score =  251 bits (642), Expect = 1e-64
 Identities = 124/168 (73%), Positives = 134/168 (79%), Gaps = 2/168 (1%)
 Frame = -1

Query: 499 MEIAPAVLASHGGVVGGATSASDEALKSSDSATPS--SEKENTNNYNVSSKYDDDDEEGD 326
           MEIAPA   S         +AS +A++ S S+T S    + N +      KYDDD+EE D
Sbjct: 1   MEIAPAAAPSID-----RDAASVDAVQPSSSSTDSVPGNEANLSTSFPGPKYDDDEEEED 55

Query: 325 VCRICRNPGDVDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE 146
           VCRICRNP D DNPL YPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE
Sbjct: 56  VCRICRNPRDADNPLSYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAE 115

Query: 145 NAPTRLPFHEFVVGIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 2
           NAP+RLPF EF+ GIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW
Sbjct: 116 NAPSRLPFQEFIFGIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 163


>ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis]
           gi|223542110|gb|EEF43654.1| ssm4 protein, putative
           [Ricinus communis]
          Length = 806

 Score =  251 bits (640), Expect = 2e-64
 Identities = 123/171 (71%), Positives = 136/171 (79%), Gaps = 5/171 (2%)
 Frame = -1

Query: 499 MEIAPAVLASHGGVVGGATSASDEALKSSDSATPSSEKENTNN----YNVSSKYDDDDEE 332
           MEIA A   +       A   S  +L SS  ++ + E+ N +        +++Y+DDDEE
Sbjct: 1   MEIAAAPSPNDDTSSNDAIRPSSSSLSSSSISSKNREESNCSGGATAATSAARYEDDDEE 60

Query: 331 G-DVCRICRNPGDVDNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV 155
             DVCRICRNPGD +NPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV
Sbjct: 61  EEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPV 120

Query: 154 YAENAPTRLPFHEFVVGIAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 2
           YAENAPTRLPF EFVVG+AMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW
Sbjct: 121 YAENAPTRLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIW 171


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