BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007344
         (1905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   172   2e-79
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   147   9e-69
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-66
ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi...   142   1e-65
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-61

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic [Vitis vinifera]
            gi|297741486|emb|CBI32618.3| unnamed protein product
            [Vitis vinifera]
          Length = 842

 Score =  172 bits (437), Expect(2) = 2e-79
 Identities = 98/167 (58%), Positives = 126/167 (75%), Gaps = 1/167 (0%)
 Frame = +2

Query: 329  GGPQSLLLEKVAANLQKTGAASFAVNLQGLTKVEARIVVLAVLRMIKENYAPGSSVKDDV 508
            G PQSLLLEKVAA+LQK+ A S A++LQGLT+VEARIVVLAVLRMIKENY  G  +KDD+
Sbjct: 676  GRPQSLLLEKVAAHLQKSVAESLAIDLQGLTQVEARIVVLAVLRMIKENYILGHPIKDDI 735

Query: 509  LIILGVQEVGSGVVNCKFDVKDAIIKLLRDDLGLQVVLVESESATDRKINLENPPPTSYP 688
            LIILG+++V + +V  +  VK AIIKLL+D+LGL+V     + A D++INL   PP S P
Sbjct: 736  LIILGIKKVDANLVEHESPVKGAIIKLLQDELGLEVAFAGPKIALDKRINL-GGPPGSDP 794

Query: 689  NSAETI-ISGLPALLESPTRRPTDLLRLKVTRKSLYNWLQKRLGSSK 826
            +  E +  + LP  LES TRRP  L R KVTRKSL +WLQ+R+G+++
Sbjct: 795  DWQEALGRNRLPTELESSTRRPAVLQRFKVTRKSLDHWLQRRVGATR 841



 Score =  151 bits (382), Expect(2) = 2e-79
 Identities = 73/86 (84%), Positives = 78/86 (90%)
 Frame = +3

Query: 3   YTATIKVCVQSKHLKSAFALFEEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ 182
           YT  IK CV+SK+LK AF+LF EMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ
Sbjct: 572 YTTAIKYCVESKNLKIAFSLFAEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ 631

Query: 183 DMRKAGYNSNDYYLKQLIEE*CEGII 260
            MRKAGY SNDYYLK+LIEE CEG+I
Sbjct: 632 HMRKAGYKSNDYYLKELIEEWCEGVI 657


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  147 bits (371), Expect(2) = 9e-69
 Identities = 88/167 (52%), Positives = 113/167 (67%)
 Frame = +2

Query: 329  GGPQSLLLEKVAANLQKTGAASFAVNLQGLTKVEARIVVLAVLRMIKENYAPGSSVKDDV 508
            G P SLLLEKVAA+L    A S +V+LQGLTKVEARIVVLAVLRM+KENY  G  VKDD+
Sbjct: 623  GRPHSLLLEKVAAHLHHNVAESLSVDLQGLTKVEARIVVLAVLRMVKENYIQGHLVKDDM 682

Query: 509  LIILGVQEVGSGVVNCKFDVKDAIIKLLRDDLGLQVVLVESESATDRKINLENPPPTSYP 688
             I LG+ +V       K +VKDAI KLL ++LGL+V++V      D + +LE  P  SY 
Sbjct: 683  SITLGIDKVDVLPATQKAEVKDAIFKLLHNELGLEVLIVVPRYTADLETDLE-IPLNSYQ 741

Query: 689  NSAETIISGLPALLESPTRRPTDLLRLKVTRKSLYNWLQKRLGSSKR 829
            N +++  SG   +  S  RRP  L RLKVTR SL++WLQ++ G+ +R
Sbjct: 742  NWSKS--SGRENIRVSSARRPLVLQRLKVTRNSLHSWLQRKAGALRR 786



 Score =  141 bits (356), Expect(2) = 9e-69
 Identities = 69/86 (80%), Positives = 77/86 (89%)
 Frame = +3

Query: 3   YTATIKVCVQSKHLKSAFALFEEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ 182
           YT  IKV V+SK+LK AF+LF EMKRYQ++PNLVTY+TLLRAR+RYGSL EVQQCLAIYQ
Sbjct: 519 YTTAIKVSVESKNLKMAFSLFAEMKRYQLKPNLVTYDTLLRARTRYGSLKEVQQCLAIYQ 578

Query: 183 DMRKAGYNSNDYYLKQLIEE*CEGII 260
           DMRKAGY SND YLKQLIEE CEG+I
Sbjct: 579 DMRKAGYKSNDNYLKQLIEEWCEGVI 604


>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  140 bits (354), Expect(2) = 1e-66
 Identities = 66/86 (76%), Positives = 77/86 (89%)
 Frame = +3

Query: 3   YTATIKVCVQSKHLKSAFALFEEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ 182
           YT  IKVCV+ K+ K AF+LFEEMKR++IQPNLVTY+TLLRARS YGSLHEVQQCLAIYQ
Sbjct: 589 YTTAIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQ 648

Query: 183 DMRKAGYNSNDYYLKQLIEE*CEGII 260
           DMRK+G+ SND+YLK+LI E CEG+I
Sbjct: 649 DMRKSGFKSNDHYLKELIAEWCEGVI 674



 Score =  140 bits (354), Expect(2) = 1e-66
 Identities = 84/160 (52%), Positives = 109/160 (68%)
 Frame = +2

Query: 329  GGPQSLLLEKVAANLQKTGAASFAVNLQGLTKVEARIVVLAVLRMIKENYAPGSSVKDDV 508
            G P+ L+LEKVA +LQK+ A S  ++LQ LTKVEARIVVLAVLRMIKENYA G SVKDD+
Sbjct: 693  GKPRCLILEKVADHLQKSFAESLTIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDI 752

Query: 509  LIILGVQEVGSGVVNCKFDVKDAIIKLLRDDLGLQVVLVESESATDRKINLENPPPTSYP 688
             IIL V +V + +V   F+V+DAI +LL+D+LGL+V+      A D+  N E     S  
Sbjct: 753  FIILEVNKVETDLVPQNFEVRDAITRLLQDELGLEVLPTGPTIALDKVPNSE-----SSK 807

Query: 689  NSAETIISGLPALLESPTRRPTDLLRLKVTRKSLYNWLQK 808
             S  T + G     +  TR+P D+ RLKVT+KSL +WLQ+
Sbjct: 808  ISHTTKLKGTMGRNKYFTRKPADVQRLKVTKKSLQDWLQR 847


>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
            chloroplastic-like [Glycine max]
          Length = 811

 Score =  142 bits (357), Expect(2) = 1e-65
 Identities = 84/161 (52%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
 Frame = +2

Query: 335  PQSLLLEKVAANLQKTGAASFAVNLQGLTKVEARIVVLAVLRMIKENYAPGSSVKDDVLI 514
            PQSLLLEK+AA+L K  A   A+++QGLTKVEAR+VVLAVLRMIKENY  G SV DD+LI
Sbjct: 657  PQSLLLEKIAAHLLKRVADILAIDVQGLTKVEARLVVLAVLRMIKENYGLGHSVNDDILI 716

Query: 515  ILGVQEVGSGVVNCKFDVKDAIIKLLRDDLGLQVVLVESESATDRKINLENPPPTSYPNS 694
            I+G  +V         +V++AIIKLLR++LGL+V   ++  A     NLE      YPN 
Sbjct: 717  IIGATKVDENPSKHILEVQEAIIKLLRNELGLEVFPAKTRLALSDTANLE------YPNF 770

Query: 695  AETIISGLPA--LLESPTRRPTDLLRLKVTRKSLYNWLQKR 811
            +   I   P    L   TRRP  L+RLKVT+KSLY WL ++
Sbjct: 771  SNLSIEAQPGENALGFQTRRPGVLVRLKVTKKSLYRWLHRK 811



 Score =  136 bits (343), Expect(2) = 1e-65
 Identities = 64/86 (74%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   YTATIKVCVQSKHLKSAFALFEEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ 182
           YT  IKVCV+SK+   A  L+EEMK YQI+PN VTYNTLL+ARS+YG LHEVQQCLAIYQ
Sbjct: 551 YTTAIKVCVESKNFMQALTLYEEMKCYQIRPNWVTYNTLLKARSKYGFLHEVQQCLAIYQ 610

Query: 183 DMRKAGYNSNDYYLKQLIEE*CEGII 260
           DMRKAGY  NDYYL++LIEE CEG+I
Sbjct: 611 DMRKAGYKPNDYYLEELIEEWCEGVI 636


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
           predicted protein [Populus trichocarpa]
          Length = 828

 Score =  146 bits (369), Expect(2) = 1e-61
 Identities = 71/86 (82%), Positives = 77/86 (89%)
 Frame = +3

Query: 3   YTATIKVCVQSKHLKSAFALFEEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQCLAIYQ 182
           YT  IKVCV++K+LK AF+LF EMKR QI PNLVTYNTLLRAR+RYGSL EVQQCLAIYQ
Sbjct: 583 YTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLRARTRYGSLREVQQCLAIYQ 642

Query: 183 DMRKAGYNSNDYYLKQLIEE*CEGII 260
           DMRKAGY SNDYYLKQLIEE CEG+I
Sbjct: 643 DMRKAGYKSNDYYLKQLIEEWCEGVI 668



 Score =  118 bits (296), Expect(2) = 1e-61
 Identities = 77/167 (46%), Positives = 103/167 (61%)
 Frame = +2

Query: 329  GGPQSLLLEKVAANLQKTGAASFAVNLQGLTKVEARIVVLAVLRMIKENYAPGSSVKDDV 508
            G P+SLLLEKVAA+LQ   + + A++LQGLTKVEARIVVLAVLRMIKENY  G SVK+D+
Sbjct: 687  GRPRSLLLEKVAAHLQNNISENLAIDLQGLTKVEARIVVLAVLRMIKENYTLGYSVKEDM 746

Query: 509  LIILGVQEVGSGVVNCKFDVKDAIIKLLRDDLGLQVVLVESESATDRKINLENPPPTSYP 688
             I L V +V         +VK+AII+LLR++LGL+V++       D K        T   
Sbjct: 747  WITLDVSKVDPASKR-DSEVKNAIIELLRNELGLEVLVAVPGHLDDIK--------TDSK 797

Query: 689  NSAETIISGLPALLESPTRRPTDLLRLKVTRKSLYNWLQKRLGSSKR 829
            +S + +++                 RLKV RKSL+ WLQ+R G+ +R
Sbjct: 798  SSLDPVVT----------------QRLKVRRKSLHEWLQRRAGAIRR 828