BLASTX nr result

ID: Panax21_contig00007301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007301
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   388   e-106
ref|XP_002533251.1| chlorophyll A/B binding protein, putative [R...   388   e-106
ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6...   387   e-105
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   386   e-105
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   383   e-104

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  388 bits (997), Expect = e-106
 Identities = 186/242 (76%), Positives = 199/242 (82%)
 Frame = +3

Query: 15  MATNALMSCGIAXXXXXXXXXXXXXXXXXXXQSLVSANGTTSRYTMTSDWMPGQPRPPYL 194
           MA+N LMSCGIA                        A   +SR++M+++WMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 195 DGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 374
           DGSAPGDFGFDPLGLG VPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 375 AAIPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 554
           AA+PGGQATYLG PVPWGTLPTILVIEFL+IAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 555 KDPXXXXXXXXXXXXNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLI 734
           KDP            NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG+++I
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 735 PR 740
           PR
Sbjct: 241 PR 242


>ref|XP_002533251.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223526931|gb|EEF29136.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 244

 Score =  388 bits (997), Expect = e-106
 Identities = 189/241 (78%), Positives = 198/241 (82%)
 Frame = +3

Query: 15  MATNALMSCGIAXXXXXXXXXXXXXXXXXXXQSLVSANGTTSRYTMTSDWMPGQPRPPYL 194
           MATN LMSCGIA                     L   NG++SR TM++DWMPGQPRPPYL
Sbjct: 1   MATNTLMSCGIATAFPSLLSSSKSKFASSVP--LPCVNGSSSRITMSADWMPGQPRPPYL 58

Query: 195 DGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 374
           DGSAPGDFGFDPL LG VPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 59  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 118

Query: 375 AAIPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 554
           AAIPGGQATYLG PVPWGTLPTILVIEFL+IAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 119 AAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 178

Query: 555 KDPXXXXXXXXXXXXNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLI 734
           KDP            NGRLALLAFVG CVQQSAYPGTGPLENLATHLADPWHNNIG+++I
Sbjct: 179 KDPAKFHEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDIII 238

Query: 735 P 737
           P
Sbjct: 239 P 239


>ref|XP_003548023.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Glycine max]
          Length = 246

 Score =  387 bits (993), Expect = e-105
 Identities = 184/244 (75%), Positives = 198/244 (81%)
 Frame = +3

Query: 15  MATNALMSCGIAXXXXXXXXXXXXXXXXXXXQSLVSANGTTSRYTMTSDWMPGQPRPPYL 194
           MA N LMS  I+                    S V  N ++SR++M++DWMPGQPRPPYL
Sbjct: 1   MAANTLMSSAISAFPSLLSSSKSRFAAAVPLSSFVVTNASSSRFSMSADWMPGQPRPPYL 60

Query: 195 DGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 374
           DGSAPGDFGFDPL LG VPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 61  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 375 AAIPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 554
           AA+PGGQATYLGNPVPWGTLPTIL IEFL+I+FVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGNPVPWGTLPTILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 555 KDPXXXXXXXXXXXXNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLI 734
           KDP            NGRLALLAFVGFCVQQSAYPGTGPLENLA HLADPWHNNIGNV+I
Sbjct: 181 KDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNVII 240

Query: 735 PRGL 746
           P+ +
Sbjct: 241 PQSI 244


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  386 bits (991), Expect = e-105
 Identities = 186/244 (76%), Positives = 200/244 (81%)
 Frame = +3

Query: 15  MATNALMSCGIAXXXXXXXXXXXXXXXXXXXQSLVSANGTTSRYTMTSDWMPGQPRPPYL 194
           MA+N LMSCGI                     S V A  + SR++M++DWMPGQPRP YL
Sbjct: 1   MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVS-VGATNSMSRFSMSADWMPGQPRPSYL 59

Query: 195 DGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 374
           DGSAPGDFGFDPLGLG VP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEW
Sbjct: 60  DGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEW 119

Query: 375 AAIPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 554
           AAIPGGQATYLG PVPWGTLPTIL IEFL+IAFVEHQRSMEKDSEKKKYPGGAFDPLGYS
Sbjct: 120 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 179

Query: 555 KDPXXXXXXXXXXXXNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLI 734
           KDP            NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG+V+I
Sbjct: 180 KDPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 239

Query: 735 PRGL 746
           P+G+
Sbjct: 240 PKGI 243


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
           [Nicotiana tabacum]
          Length = 245

 Score =  383 bits (984), Expect = e-104
 Identities = 185/244 (75%), Positives = 200/244 (81%)
 Frame = +3

Query: 15  MATNALMSCGIAXXXXXXXXXXXXXXXXXXXQSLVSANGTTSRYTMTSDWMPGQPRPPYL 194
           MA+N LMSCGIA                     + + +G  SR++M+++WMPGQPRPPYL
Sbjct: 1   MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSGN-SRFSMSAEWMPGQPRPPYL 59

Query: 195 DGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 374
           DGSAPGDFGFDPLGLG VP NLER+KESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 60  DGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 119

Query: 375 AAIPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDSEKKKYPGGAFDPLGYS 554
           AAIPGGQATYLG PVPWGTLPTIL IEFL+IAFVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 120 AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 179

Query: 555 KDPXXXXXXXXXXXXNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNVLI 734
           KDP            NGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIG+V+I
Sbjct: 180 KDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVII 239

Query: 735 PRGL 746
            RG+
Sbjct: 240 LRGI 243


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