BLASTX nr result

ID: Panax21_contig00007289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007289
         (1104 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   435   e-119
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]   435   e-119
emb|CBI40505.3| unnamed protein product [Vitis vinifera]              418   e-114
ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   413   e-113
gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tam...   412   e-112

>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
            vinifera]
          Length = 751

 Score =  435 bits (1118), Expect = e-119
 Identities = 229/287 (79%), Positives = 250/287 (87%), Gaps = 2/287 (0%)
 Frame = -2

Query: 857  KVRDSFRELFSEEDSEEDGEAVDEDDC--EEVFKTASSFSKLEIKDGSAISLTSSHGGSD 684
            +++ SF+ L SEEDSEE+ E  D+DD   E + K ASS      K+       SS G SD
Sbjct: 221  ELKGSFKGLLSEEDSEEEEEEDDDDDDHDEVLKKNASSLFGAAAKEAVP---RSSTGKSD 277

Query: 683  SYLSATRFDQCSISSLSLKALKDAGYEKMTVVQEQTLPVILKGKDVLAKARTGTGKTVAF 504
            SYLS TRFDQC IS LSLKA+KDAGYEKMTVVQE TLPVILKGKDVLAKA+TGTGKTVAF
Sbjct: 278  SYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAF 337

Query: 503  LLPSIEVVSKSPPVGRDQTRPPILVLVMCPTRELASQAAAEADKLLKYHSSIGVQVVIGG 324
            LLPSIE++ KSPP+ RDQ RPPI+VLV+CPTRELASQAAAEA+ LLKYH S+GVQVVIGG
Sbjct: 338  LLPSIEILVKSPPISRDQKRPPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGG 397

Query: 323  TRLALEQKRMQANPCQILVATPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRK 144
            TRLALEQKRMQANPCQILVATPGRLKDHIENT GFATRLMGVKVLVLDEADHLLDMGFRK
Sbjct: 398  TRLALEQKRMQANPCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRK 457

Query: 143  DIEKIIAAVPKERQTLLFSATVPQEVRQICHIALKRDHEYINTVEEG 3
            DIEKIIAAVPK+RQTLLFSATVP+EVRQICHIALKRDHE+INTV+EG
Sbjct: 458  DIEKIIAAVPKQRQTLLFSATVPEEVRQICHIALKRDHEFINTVQEG 504


>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
          Length = 863

 Score =  435 bits (1118), Expect = e-119
 Identities = 229/287 (79%), Positives = 250/287 (87%), Gaps = 2/287 (0%)
 Frame = -2

Query: 857  KVRDSFRELFSEEDSEEDGEAVDEDDC--EEVFKTASSFSKLEIKDGSAISLTSSHGGSD 684
            +++ SF+ L SEEDSEE+ E  D+DD   E + K ASS      K+       SS G SD
Sbjct: 333  ELKGSFKGLLSEEDSEEEEEEDDDDDDHDEVLKKNASSLFGAAAKEAVP---RSSTGKSD 389

Query: 683  SYLSATRFDQCSISSLSLKALKDAGYEKMTVVQEQTLPVILKGKDVLAKARTGTGKTVAF 504
            SYLS TRFDQC IS LSLKA+KDAGYEKMTVVQE TLPVILKGKDVLAKA+TGTGKTVAF
Sbjct: 390  SYLSETRFDQCPISPLSLKAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAF 449

Query: 503  LLPSIEVVSKSPPVGRDQTRPPILVLVMCPTRELASQAAAEADKLLKYHSSIGVQVVIGG 324
            LLPSIE++ KSPP+ RDQ RPPI+VLV+CPTRELASQAAAEA+ LLKYH S+GVQVVIGG
Sbjct: 450  LLPSIEILVKSPPISRDQKRPPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGG 509

Query: 323  TRLALEQKRMQANPCQILVATPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRK 144
            TRLALEQKRMQANPCQILVATPGRLKDHIENT GFATRLMGVKVLVLDEADHLLDMGFRK
Sbjct: 510  TRLALEQKRMQANPCQILVATPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRK 569

Query: 143  DIEKIIAAVPKERQTLLFSATVPQEVRQICHIALKRDHEYINTVEEG 3
            DIEKIIAAVPK+RQTLLFSATVP+EVRQICHIALKRDHE+INTV+EG
Sbjct: 570  DIEKIIAAVPKQRQTLLFSATVPEEVRQICHIALKRDHEFINTVQEG 616


>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  418 bits (1075), Expect = e-114
 Identities = 220/269 (81%), Positives = 237/269 (88%), Gaps = 1/269 (0%)
 Frame = -2

Query: 806  DGEAVDEDDCEEVFK-TASSFSKLEIKDGSAISLTSSHGGSDSYLSATRFDQCSISSLSL 630
            +GE  DED+  +V K  ASS      K+       SS G SDSYLS TRFDQC IS LSL
Sbjct: 220  EGEDEDEDEELKVLKKNASSLFGAAAKEAVP---RSSTGKSDSYLSETRFDQCPISPLSL 276

Query: 629  KALKDAGYEKMTVVQEQTLPVILKGKDVLAKARTGTGKTVAFLLPSIEVVSKSPPVGRDQ 450
            KA+KDAGYEKMTVVQE TLPVILKGKDVLAKA+TGTGKTVAFLLPSIE++ KSPP+ RDQ
Sbjct: 277  KAIKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEILVKSPPISRDQ 336

Query: 449  TRPPILVLVMCPTRELASQAAAEADKLLKYHSSIGVQVVIGGTRLALEQKRMQANPCQIL 270
             RPPI+VLV+CPTRELASQAAAEA+ LLKYH S+GVQVVIGGTRLALEQKRMQANPCQIL
Sbjct: 337  KRPPIVVLVICPTRELASQAAAEANTLLKYHPSLGVQVVIGGTRLALEQKRMQANPCQIL 396

Query: 269  VATPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKERQTLLF 90
            VATPGRLKDHIENT GFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPK+RQTLLF
Sbjct: 397  VATPGRLKDHIENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAVPKQRQTLLF 456

Query: 89   SATVPQEVRQICHIALKRDHEYINTVEEG 3
            SATVP+EVRQICHIALKRDHE+INTV+EG
Sbjct: 457  SATVPEEVRQICHIALKRDHEFINTVQEG 485


>ref|XP_003529893.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Glycine max]
          Length = 703

 Score =  413 bits (1061), Expect = e-113
 Identities = 215/278 (77%), Positives = 238/278 (85%), Gaps = 4/278 (1%)
 Frame = -2

Query: 824  EEDSEEDGEAVDEDDCEEVFKTASSFSKLEIKDGSAISLT----SSHGGSDSYLSATRFD 657
            +ED +E+ E  +E++     +TA  F +  + +      T    S  GGSDSYLS TRFD
Sbjct: 179  DEDEDEESEGSEEEEILNKSRTAL-FGQQNVLNRRNTEPTPRPSSPGGGSDSYLSETRFD 237

Query: 656  QCSISSLSLKALKDAGYEKMTVVQEQTLPVILKGKDVLAKARTGTGKTVAFLLPSIEVVS 477
            QCSIS LSLK +KDAGYEKMTVVQE TLPVILKGKDVLAKA+TGTGKTVAFLLPSIEVV+
Sbjct: 238  QCSISPLSLKGVKDAGYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVA 297

Query: 476  KSPPVGRDQTRPPILVLVMCPTRELASQAAAEADKLLKYHSSIGVQVVIGGTRLALEQKR 297
            KSPP  RD  RPPI VLV+CPTRELASQAAAEA KLLKYH +IGVQVVIGGTRLALEQKR
Sbjct: 298  KSPPSDRDHRRPPIAVLVICPTRELASQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKR 357

Query: 296  MQANPCQILVATPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAV 117
            MQANPCQILVATPGRL+DH ENT GFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAV
Sbjct: 358  MQANPCQILVATPGRLRDHTENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIAAV 417

Query: 116  PKERQTLLFSATVPQEVRQICHIALKRDHEYINTVEEG 3
            PK+RQTL+FSATVP+EVRQ+CHIAL+RDHE+INTV+EG
Sbjct: 418  PKQRQTLMFSATVPEEVRQVCHIALRRDHEFINTVQEG 455


>gb|AEJ88341.1| putative DEAD-box ATP-dependent RNA helicase [Tamarix hispida]
          Length = 783

 Score =  412 bits (1058), Expect = e-112
 Identities = 212/280 (75%), Positives = 238/280 (85%)
 Frame = -2

Query: 842  FRELFSEEDSEEDGEAVDEDDCEEVFKTASSFSKLEIKDGSAISLTSSHGGSDSYLSATR 663
            F +L  E+ SEE+ +  +  D  E+   +S F K   +D +     SS G  DSYLS TR
Sbjct: 259  FLDLIGEDVSEEEDDDDNAGDEPEIQSRSSLFGKDSERDNTPPG--SSVGSDDSYLSETR 316

Query: 662  FDQCSISSLSLKALKDAGYEKMTVVQEQTLPVILKGKDVLAKARTGTGKTVAFLLPSIEV 483
            FDQC IS LSLKA+KDAGYEKMT+VQE TLPVILKGKDV+AKA+TGTGKTVAFLLPSIE+
Sbjct: 317  FDQCDISPLSLKAVKDAGYEKMTMVQEATLPVILKGKDVMAKAKTGTGKTVAFLLPSIEL 376

Query: 482  VSKSPPVGRDQTRPPILVLVMCPTRELASQAAAEADKLLKYHSSIGVQVVIGGTRLALEQ 303
            V KSPPVGRDQ RPPILVLV+CPTRELA+QAA EA  LLKYH SIG QVVIGGTRLA+EQ
Sbjct: 377  VVKSPPVGRDQKRPPILVLVVCPTRELANQAAKEAGSLLKYHPSIGCQVVIGGTRLAVEQ 436

Query: 302  KRMQANPCQILVATPGRLKDHIENTTGFATRLMGVKVLVLDEADHLLDMGFRKDIEKIIA 123
            KRMQANPCQILVATPGRL+DH+ENT GFATRLMGVKVLVLDEADHLLDMGFRKDIE+IIA
Sbjct: 437  KRMQANPCQILVATPGRLRDHLENTAGFATRLMGVKVLVLDEADHLLDMGFRKDIERIIA 496

Query: 122  AVPKERQTLLFSATVPQEVRQICHIALKRDHEYINTVEEG 3
            AVPK+RQTLLFSAT+P EVRQICH+ALKRDH++IN V+EG
Sbjct: 497  AVPKQRQTLLFSATIPDEVRQICHVALKRDHDFINKVQEG 536


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