BLASTX nr result

ID: Panax21_contig00007277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007277
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|1...   183   3e-44
gb|AFK36667.1| unknown [Lotus japonicus]                              181   1e-43
ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   181   1e-43
ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arab...   180   3e-43

>ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|222843797|gb|EEE81344.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  184 bits (467), Expect = 2e-44
 Identities = 87/103 (84%), Positives = 95/103 (92%)
 Frame = +3

Query: 60  MVYITSWDDFVERSVQFFRVHPDKARYVMKYRNCDGKLVLKVTDDKKCLKFKTDQAQDAK 239
           MVY+ SWD+FVERSVQ FR  PD  RYVMKYR+CDGKLVLKVTD+K+CLKFKTDQAQDAK
Sbjct: 1   MVYMASWDEFVERSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60

Query: 240 KMEKLNNIFFTLMARGPEADVTEVTGKEQTEAQPAKKGRGRKQ 368
           KMEKLNN FFTLM+RGPEAD++EVTGKEQTEAQP KKGRGRKQ
Sbjct: 61  KMEKLNNQFFTLMSRGPEADLSEVTGKEQTEAQPGKKGRGRKQ 103


>ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|118481739|gb|ABK92809.1|
           unknown [Populus trichocarpa]
           gi|222856271|gb|EEE93818.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score =  183 bits (465), Expect = 3e-44
 Identities = 86/103 (83%), Positives = 95/103 (92%)
 Frame = +3

Query: 60  MVYITSWDDFVERSVQFFRVHPDKARYVMKYRNCDGKLVLKVTDDKKCLKFKTDQAQDAK 239
           MVYITSWDDFV+RSVQ FR  PD  RYVMKYR+CDGKLVLKVTD+K+CLKFKTDQAQD K
Sbjct: 1   MVYITSWDDFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQDVK 60

Query: 240 KMEKLNNIFFTLMARGPEADVTEVTGKEQTEAQPAKKGRGRKQ 368
           KMEKLNN+FFTLM+RGP+ADV+EVTGKEQTEA+  KKGRGRKQ
Sbjct: 61  KMEKLNNLFFTLMSRGPDADVSEVTGKEQTEARAGKKGRGRKQ 103


>gb|AFK36667.1| unknown [Lotus japonicus]
          Length = 103

 Score =  181 bits (460), Expect = 1e-43
 Identities = 83/103 (80%), Positives = 97/103 (94%)
 Frame = +3

Query: 60  MVYITSWDDFVERSVQFFRVHPDKARYVMKYRNCDGKLVLKVTDDKKCLKFKTDQAQDAK 239
           MVYITSWD+FV+R+VQ +R  PD  RYVMKYR+CDGKLVLKVTD+K+CLK+KTDQ+Q+AK
Sbjct: 1   MVYITSWDEFVDRTVQLYRADPDSTRYVMKYRHCDGKLVLKVTDNKQCLKYKTDQSQEAK 60

Query: 240 KMEKLNNIFFTLMARGPEADVTEVTGKEQTEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGPE D++EVTGKEQT+AQPAK+GRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPEVDLSEVTGKEQTDAQPAKRGRGRKQ 103


>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  181 bits (459), Expect = 1e-43
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = +3

Query: 60  MVYITSWDDFVERSVQFFRVHPDKARYVMKYRNCDGKLVLKVTDDKKCLKFKTDQAQDAK 239
           MVYI SWD+FV+RSVQ FR  PD  RYVMKYR+CDGKLVLKVTD+++CLKFKTDQAQDAK
Sbjct: 1   MVYIESWDEFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRECLKFKTDQAQDAK 60

Query: 240 KMEKLNNIFFTLMARGPEADVTEVTGKEQTEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGPE D++EVTGKE  E QPAKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQPAKKGRGRKQ 103


>ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arabidopsis lyrata subsp.
           lyrata] gi|297321778|gb|EFH52199.1| hypothetical protein
           ARALYDRAFT_906164 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  180 bits (456), Expect = 3e-43
 Identities = 84/103 (81%), Positives = 94/103 (91%)
 Frame = +3

Query: 60  MVYITSWDDFVERSVQFFRVHPDKARYVMKYRNCDGKLVLKVTDDKKCLKFKTDQAQDAK 239
           MVYI SWD+FV+RSVQ FR  P+  RYVMKYR+CDGKLVLKVTD+K+CLKFKTDQAQ+AK
Sbjct: 1   MVYIASWDEFVDRSVQIFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60

Query: 240 KMEKLNNIFFTLMARGPEADVTEVTGKEQTEAQPAKKGRGRKQ 368
           KMEKLNNIFFTLMARGP+ D++EVTGKEQ E QPAKKGRGRKQ
Sbjct: 61  KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103


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