BLASTX nr result

ID: Panax21_contig00007262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007262
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   512   e-143
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   512   e-143
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...   508   e-142
ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   497   e-138

>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  513 bits (1322), Expect = e-143
 Identities = 254/294 (86%), Positives = 276/294 (93%)
 Frame = -1

Query: 883 GSSGRGHGSSAVGSGLSAESYRHRHEITVTGDSVLPPFTSFEETGLPSEILRELHQAGFS 704
           G S RGHGSS+ GSGL+ E+YR RHEITVTGD V PP TSFE TG PSEIL+E+ +AGFS
Sbjct: 116 GISARGHGSSSGGSGLTGEAYRRRHEITVTGDEVPPPLTSFEATGFPSEILKEVLKAGFS 175

Query: 703 SPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLKRTRKNPQLGPTVLVLSPT 524
           SPTPIQAQSWP+ALQSRDIVA+AKTGSGKTLGYLIPGF+HLKR R +PQLGPTVLVLSPT
Sbjct: 176 SPTPIQAQSWPVALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRCRNDPQLGPTVLVLSPT 235

Query: 523 RELATQIQDEAAKFGRSAKISCTCLYGGAPKGPQLRDLDRGMDIVVATPGRLNDILEMRR 344
           RELATQIQDEA KFG+S++ISCTCLYGGAPKGPQL++LDRG DIVVATPGRLNDILEMRR
Sbjct: 236 RELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMRR 295

Query: 343 VSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 164
           VSL+QV YLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN
Sbjct: 296 VSLNQVKYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 355

Query: 163 PVQVNIGNVDELVANKSITQHVEIVSSMEKQRRVEQILRSQEPGSKIIIFCSTK 2
           PVQVNIGN+DELVANKSITQHVE+++ +EK RR+EQILRSQEPGSKIIIFCSTK
Sbjct: 356 PVQVNIGNIDELVANKSITQHVELLAPLEKHRRLEQILRSQEPGSKIIIFCSTK 409


>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
            [Vitis vinifera]
          Length = 828

 Score =  512 bits (1318), Expect = e-143
 Identities = 256/294 (87%), Positives = 272/294 (92%)
 Frame = -1

Query: 883  GSSGRGHGSSAVGSGLSAESYRHRHEITVTGDSVLPPFTSFEETGLPSEILRELHQAGFS 704
            GSS RG GSS  GSG S ESYR RHEITVTGD V  PFTSFE TG P EI+RE++ AGFS
Sbjct: 125  GSSVRGQGSSGPGSGASTESYRRRHEITVTGDDVPQPFTSFESTGFPPEIIREVYSAGFS 184

Query: 703  SPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLKRTRKNPQLGPTVLVLSPT 524
            +PTPIQAQSWP+ALQSRDIVAIAKTGSGKTLGYLIPGF+HLKR R NPQ+GPTVLVLSPT
Sbjct: 185  APTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLVLSPT 244

Query: 523  RELATQIQDEAAKFGRSAKISCTCLYGGAPKGPQLRDLDRGMDIVVATPGRLNDILEMRR 344
            RELATQIQDEA KFGRS+++SCTCLYGGAPKGPQLRDLDRG DIVVATPGRLNDILEMRR
Sbjct: 245  RELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRR 304

Query: 343  VSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 164
            VSL QVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN
Sbjct: 305  VSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 364

Query: 163  PVQVNIGNVDELVANKSITQHVEIVSSMEKQRRVEQILRSQEPGSKIIIFCSTK 2
            PVQVNIGNVDELVANK+ITQ+VE++  MEK +R+EQILRSQEPGSKIIIFCSTK
Sbjct: 365  PVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTK 418


>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
            [Vitis vinifera]
          Length = 863

 Score =  512 bits (1318), Expect = e-143
 Identities = 256/294 (87%), Positives = 272/294 (92%)
 Frame = -1

Query: 883  GSSGRGHGSSAVGSGLSAESYRHRHEITVTGDSVLPPFTSFEETGLPSEILRELHQAGFS 704
            GSS RG GSS  GSG S ESYR RHEITVTGD V  PFTSFE TG P EI+RE++ AGFS
Sbjct: 125  GSSVRGQGSSGPGSGASTESYRRRHEITVTGDDVPQPFTSFESTGFPPEIIREVYSAGFS 184

Query: 703  SPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLKRTRKNPQLGPTVLVLSPT 524
            +PTPIQAQSWP+ALQSRDIVAIAKTGSGKTLGYLIPGF+HLKR R NPQ+GPTVLVLSPT
Sbjct: 185  APTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLVLSPT 244

Query: 523  RELATQIQDEAAKFGRSAKISCTCLYGGAPKGPQLRDLDRGMDIVVATPGRLNDILEMRR 344
            RELATQIQDEA KFGRS+++SCTCLYGGAPKGPQLRDLDRG DIVVATPGRLNDILEMRR
Sbjct: 245  RELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRR 304

Query: 343  VSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 164
            VSL QVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN
Sbjct: 305  VSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 364

Query: 163  PVQVNIGNVDELVANKSITQHVEIVSSMEKQRRVEQILRSQEPGSKIIIFCSTK 2
            PVQVNIGNVDELVANK+ITQ+VE++  MEK +R+EQILRSQEPGSKIIIFCSTK
Sbjct: 365  PVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIFCSTK 418


>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 781

 Score =  508 bits (1307), Expect = e-142
 Identities = 253/294 (86%), Positives = 275/294 (93%)
 Frame = -1

Query: 883  GSSGRGHGSSAVGSGLSAESYRHRHEITVTGDSVLPPFTSFEETGLPSEILRELHQAGFS 704
            G S RGHGSSA GS LS E+YR RHEI+VTGD V PP T+FE TG PSEILRE+  AGFS
Sbjct: 125  GPSARGHGSSAGGSILSPEAYRRRHEISVTGDDVPPPLTTFEATGFPSEILREVLSAGFS 184

Query: 703  SPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLKRTRKNPQLGPTVLVLSPT 524
             PTPIQAQSWPIALQS+DIVAIAKTGSGKTLGYL+PGF+HLKR R +PQLGPTVLVLSPT
Sbjct: 185  VPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPGFIHLKRCRNDPQLGPTVLVLSPT 244

Query: 523  RELATQIQDEAAKFGRSAKISCTCLYGGAPKGPQLRDLDRGMDIVVATPGRLNDILEMRR 344
            RELATQIQDEA KFGRS++ISCTCLYGGAPKGPQL++LDRG+DIVVATPGRLNDILEMRR
Sbjct: 245  RELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLKELDRGVDIVVATPGRLNDILEMRR 304

Query: 343  VSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 164
            +SLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVP+RRQTLMYTATWP+EVRKIAADLLVN
Sbjct: 305  ISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTATWPREVRKIAADLLVN 364

Query: 163  PVQVNIGNVDELVANKSITQHVEIVSSMEKQRRVEQILRSQEPGSKIIIFCSTK 2
            PVQVNIGNVDELVANKSITQ++E+++ MEK RR+EQILRSQEPGSKIIIFCSTK
Sbjct: 365  PVQVNIGNVDELVANKSITQYIEVLAPMEKHRRLEQILRSQEPGSKIIIFCSTK 418


>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
            sativus]
          Length = 778

 Score =  497 bits (1279), Expect = e-138
 Identities = 245/294 (83%), Positives = 271/294 (92%)
 Frame = -1

Query: 883  GSSGRGHGSSAVGSGLSAESYRHRHEITVTGDSVLPPFTSFEETGLPSEILRELHQAGFS 704
            G+  +GH  S  G+G+SAESYR RHEIT +GD+V  PF+SFE TG P EILRE+H AGFS
Sbjct: 123  GAPLKGHRPSDAGNGISAESYRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNAGFS 182

Query: 703  SPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFMHLKRTRKNPQLGPTVLVLSPT 524
            +PTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGF+HLKR R +P+LGPTVLVLSPT
Sbjct: 183  APTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNDPKLGPTVLVLSPT 242

Query: 523  RELATQIQDEAAKFGRSAKISCTCLYGGAPKGPQLRDLDRGMDIVVATPGRLNDILEMRR 344
            RELATQIQDEA KFG+S++ISC CLYGGAPKG QLRD+DRG+DIVVATPGRLNDILEMRR
Sbjct: 243  RELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVDIVVATPGRLNDILEMRR 302

Query: 343  VSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIAADLLVN 164
            +SL QVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIA+DLLVN
Sbjct: 303  ISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKIASDLLVN 362

Query: 163  PVQVNIGNVDELVANKSITQHVEIVSSMEKQRRVEQILRSQEPGSKIIIFCSTK 2
            P+QVNIGNVDELVANKSITQH+E ++ +EK RR+EQILRSQEPGSK+IIFCSTK
Sbjct: 363  PIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKVIIFCSTK 416


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