BLASTX nr result

ID: Panax21_contig00007232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007232
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]   157   1e-47
ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267...   157   1e-47
ref|XP_002510189.1| protein binding protein, putative [Ricinus c...   123   5e-34
ref|XP_003589164.1| Zinc finger protein [Medicago truncatula] gi...   116   6e-31
ref|XP_003549395.1| PREDICTED: uncharacterized protein LOC100791...   114   3e-30

>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
          Length = 1022

 Score =  157 bits (397), Expect(2) = 1e-47
 Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ESPPVLSAAGSSESSRRNFLLRINSSHQQDSIPTNVFAAGSDVGPSNVSSPHQSSRLVPL 182
           +S PVL+  GS+ESS RNF +RIN SHQQDS+P N+F+AG  V  SNVSS  QS+RL+P+
Sbjct: 301 DSLPVLNVPGSAESSHRNFRMRINPSHQQDSVPHNLFSAGGSVRHSNVSSHQQSTRLIPV 360

Query: 183 NNSLDLRSPAVADSASPQGQSLIGHVPAMRRNLQ--RWHRNXXXXXXXXXXFAIAGDRDT 356
           N++ DLRS   AD+AS Q QS++ H P + R +Q  RW               I+G+RD 
Sbjct: 361 NHAPDLRSTPAADNASSQSQSVVNHAPNLPRTMQSFRWSGASSSRHGNSSSPLISGERDA 420

Query: 357 ASHEESSSRSIPRNILGHPMFVPASGMRNSAQSPVNWSLPGGDI 488
           A  EESSSRS+PRN L H MF+PA  +R+  Q+P N +L GG++
Sbjct: 421 APREESSSRSMPRNTLEHSMFLPAIDLRSLPQNPTNRNLAGGNM 464



 Score = 58.9 bits (141), Expect(2) = 1e-47
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +2

Query: 596 VHQTSAPNWVPHRNSP-QYPRRLSEFVRRSLASSSGPDSGAQNNNTSPPRS 745
           V+ +SAP W P R+ P QY RRLSE+VRRSL SS G DSG Q++N SP  S
Sbjct: 482 VNSSSAPTWGPPRDPPSQYSRRLSEYVRRSLFSSVGADSGGQSSNYSPLHS 532


>ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267740 [Vitis vinifera]
          Length = 734

 Score =  157 bits (397), Expect(2) = 1e-47
 Identities = 83/164 (50%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ESPPVLSAAGSSESSRRNFLLRINSSHQQDSIPTNVFAAGSDVGPSNVSSPHQSSRLVPL 182
           +S PVL+  GS+ESS RNF +RIN SHQQDS+P N+F+AG  V  SNVSS  QS+RL+P+
Sbjct: 301 DSLPVLNVPGSAESSHRNFRMRINPSHQQDSVPHNLFSAGGSVRHSNVSSHQQSTRLIPV 360

Query: 183 NNSLDLRSPAVADSASPQGQSLIGHVPAMRRNLQ--RWHRNXXXXXXXXXXFAIAGDRDT 356
           N++ DLRS   AD+AS Q QS++ H P + R +Q  RW               I+G+RD 
Sbjct: 361 NHAPDLRSTPAADNASSQSQSVVNHAPNLPRTMQSFRWSGASSSRHGNSSSPLISGERDA 420

Query: 357 ASHEESSSRSIPRNILGHPMFVPASGMRNSAQSPVNWSLPGGDI 488
           A  EESSSRS+PRN L H MF+PA  +R+  Q+P N +L GG++
Sbjct: 421 APREESSSRSMPRNTLEHSMFLPAIDLRSLPQNPTNRNLAGGNM 464



 Score = 58.9 bits (141), Expect(2) = 1e-47
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +2

Query: 596 VHQTSAPNWVPHRNSP-QYPRRLSEFVRRSLASSSGPDSGAQNNNTSPPRS 745
           V+ +SAP W P R+ P QY RRLSE+VRRSL SS G DSG Q++N SP  S
Sbjct: 482 VNSSSAPTWGPPRDPPSQYSRRLSEYVRRSLFSSVGADSGGQSSNYSPLHS 532


>ref|XP_002510189.1| protein binding protein, putative [Ricinus communis]
           gi|223550890|gb|EEF52376.1| protein binding protein,
           putative [Ricinus communis]
          Length = 709

 Score =  123 bits (309), Expect(2) = 5e-34
 Identities = 73/163 (44%), Positives = 104/163 (63%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3   ESPPVLSAAGSSESSRRNFLLRINSSHQQDSIPTNVFAAGSDVGPSNVSSPHQSSRLVPL 182
           +S P L+ AG  E+S+RNF LRI+SS+Q+ S+P + F+ GS V  SNV S H+SSRL+P+
Sbjct: 283 DSIPDLAVAGRPETSQRNFRLRISSSNQE-SVPPSSFSTGSAVRRSNVPSSHRSSRLLPV 341

Query: 183 NNSLDLRSPAVADSASPQGQSLIGHVPAMRRNLQ--RWHRNXXXXXXXXXXFAIAGDRDT 356
           N+SLD RS +  D+A+   Q +I  VPA+ +N+   RW+ N               DR  
Sbjct: 342 NHSLDFRSASGVDNATSHSQPVIIPVPALPQNVPSFRWNENSSSRIGSSSSSITLPDR-- 399

Query: 357 ASHEESSSRSIPRNILGHPMFVPASGMRNSAQSPVNWSLPGGD 485
              EE+SSRS+ RN+  HPMFVP + +R SA++P N S+ GG+
Sbjct: 400 ---EEASSRSMSRNMWEHPMFVPTTELRTSARNPTNRSVTGGN 439



 Score = 47.4 bits (111), Expect(2) = 5e-34
 Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +2

Query: 596 VHQTSAPNWVPHRNSP-QYPRRLSEFVRRSLASSSGPDSGAQNNNTS 733
           VH  SAP WV H N P +  RRL+EFVRRSL  S+G DSG Q+   S
Sbjct: 458 VHPLSAPTWVSHPNPPSRNSRRLAEFVRRSL-FSAGADSGGQSTTHS 503


>ref|XP_003589164.1| Zinc finger protein [Medicago truncatula]
           gi|355478212|gb|AES59415.1| Zinc finger protein
           [Medicago truncatula]
          Length = 708

 Score =  116 bits (291), Expect(2) = 6e-31
 Identities = 74/168 (44%), Positives = 97/168 (57%), Gaps = 9/168 (5%)
 Frame = +3

Query: 3   ESPPVLSAAGSSESSRRNFLLRINSSHQQDSIPTNVFAAGSDVGPSNV-SSPHQSSRLVP 179
           E+ P  + AGSSES  RNF LRIN S QQ S+P   F+ GS +  S+V SS     R  P
Sbjct: 286 ETIPGSTVAGSSESFHRNFRLRINPSSQQISLPPATFSHGSVIRNSSVPSSAPMLQRYHP 345

Query: 180 LNNSLDLRSPAVADSASPQGQSLIGHVPAMRRNLQ--RWHRNXXXXXXXXXXFAIAGDRD 353
           +NN LDLRS    +   PQ + L+ HVPA+ R+ Q  RW               +  DRD
Sbjct: 346 INNPLDLRSVQPVNVMHPQSEPLLVHVPALPRSAQSIRWSGGSSSTNNHSSNSVLGLDRD 405

Query: 354 TASHEESSSRSIPRNILGHPMFVPASGMRNSAQSP------VNWSLPG 479
           T  HEE+ SR++ RNIL HP+FVPA+ +RN+A++P       N S+PG
Sbjct: 406 TQPHEEAGSRAMARNILDHPVFVPAN-VRNAARNPARSSSSANLSIPG 452



 Score = 43.9 bits (102), Expect(2) = 6e-31
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = +2

Query: 596 VHQTSAPNWVPHRNSPQYPRRLSEFVRRSLASSSGPDSGAQNNN 727
           ++ +S   WV   N  QYPRRLSE+VRRSL  S G + G+ +NN
Sbjct: 467 LNPSSVSAWVSRPNPQQYPRRLSEYVRRSL-FSPGSEGGSSSNN 509


>ref|XP_003549395.1| PREDICTED: uncharacterized protein LOC100791026 [Glycine max]
          Length = 682

 Score =  114 bits (284), Expect(2) = 3e-30
 Identities = 69/168 (41%), Positives = 94/168 (55%), Gaps = 9/168 (5%)
 Frame = +3

Query: 3   ESPPVLSAAGSSESSRRNFLLRINSSHQQDSIPTNVFAAGSDVGPSNVSSPHQS-SRLVP 179
           ES PV + A SS S  RNF  R + S QQ S+P    ++G+ +  S VSSP     R  P
Sbjct: 282 ESIPVSNVARSSGSFHRNFRPRTSPSSQQISVPPTAISSGNVIRSSGVSSPSPILQRFHP 341

Query: 180 LNNSLDLRSPAVADSASPQGQSLIGHVPAMRRNLQ--RWHRNXXXXXXXXXXFAIAGDRD 353
           ++NS DLR+    D+  PQ Q L+ HVPA+ RN Q  RW               +  DR+
Sbjct: 342 VDNSFDLRAVPPVDTMVPQSQPLVIHVPALPRNAQSFRWSGGSSSTNNHSSNSVMCADRN 401

Query: 354 TASHEESSSRSIPRNILGHPMFVPASGMRNSAQSP------VNWSLPG 479
              +EE+SSRS+PRNI+ +PMFVPA+ +RN  ++P       N S+PG
Sbjct: 402 NLPNEEASSRSMPRNIIEYPMFVPATNLRNVVRNPARTSNNANLSIPG 449



 Score = 44.3 bits (103), Expect(2) = 3e-30
 Identities = 23/49 (46%), Positives = 30/49 (61%)
 Frame = +2

Query: 596 VHQTSAPNWVPHRNSPQYPRRLSEFVRRSLASSSGPDSGAQNNNTSPPR 742
           V+   A  WV   N  QYPRRLSE+VRRSL S     +G+ +N+ +P R
Sbjct: 463 VNPPPASAWVSRPNPQQYPRRLSEYVRRSLFSPGLEAAGSSSNSYTPFR 511


Top