BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007224
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             288   1e-75
gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsi...   275   9e-72
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   275   1e-71
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             274   2e-71
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   273   3e-71

>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  288 bits (736), Expect = 1e-75
 Identities = 133/227 (58%), Positives = 178/227 (78%)
 Frame = +1

Query: 28   IFEIDYPEWMANVVLVQK*NEKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLR 207
            I E+ YPEW+AN V+V+K N KWRVC+DYTDLNKACPKD YPLPHID+L++ATSG  LL 
Sbjct: 853  IIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLS 912

Query: 208  FMDAFFGYPQISMCKKDILKTAFITHRSVYAYKKMTFGLINAGATYQRMMNFIFRGKLRR 387
            FMDAF GY QI M K D  KT+F+T R  Y YK M+FGL NAGATYQR +N +   ++ R
Sbjct: 913  FMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGR 972

Query: 388  NMEVYVDDMIVKSMIVQKHLDDLDECF*TVRNHNLRLNPTKCTFGLGAGKFMGYVVIQRG 567
             +EVY+DDM+VKS+  + H++ L +CF  +  + ++LNPTKCTFG+ +G+F+GYVV +RG
Sbjct: 973  TVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRG 1032

Query: 568  IEANPEKIQAILNMKTPQSFKDVQCLTGRITALRRFMSKSAERCLQF 708
            IEANP++I+AIL + +P++ ++VQ LTGRI AL RF+S+S ++CL F
Sbjct: 1033 IEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRSTDKCLPF 1079


>gb|AAD20101.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 764

 Score =  275 bits (703), Expect = 9e-72
 Identities = 128/227 (56%), Positives = 174/227 (76%)
 Frame = +1

Query: 28   IFEIDYPEWMANVVLVQK*NEKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLR 207
            I E+ YPEW+AN V+V+K N+KWRVCID+TDLNKACPKD +PLPHID++++AT+G  LL 
Sbjct: 526  IVEVKYPEWLANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLS 585

Query: 208  FMDAFFGYPQISMCKKDILKTAFITHRSVYAYKKMTFGLINAGATYQRMMNFIFRGKLRR 387
            FMDAF GY QI M K D  KT+FI  R  Y YK M FGL N GA YQR++N +F  +L +
Sbjct: 586  FMDAFSGYNQIPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGK 645

Query: 388  NMEVYVDDMIVKSMIVQKHLDDLDECF*TVRNHNLRLNPTKCTFGLGAGKFMGYVVIQRG 567
             MEVY+DDM+VKS     H+D L  CF T+  +N++LNP KC FG+ +G+F+GY+V +RG
Sbjct: 646  TMEVYIDDMLVKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRG 705

Query: 568  IEANPEKIQAILNMKTPQSFKDVQCLTGRITALRRFMSKSAERCLQF 708
            IEANP++I+AIL++++P++ K+VQ LTGRI  L RF+++S ++ L F
Sbjct: 706  IEANPKQIRAILDLQSPRNKKEVQRLTGRIAGLNRFIARSTDKSLPF 752


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  275 bits (702), Expect = 1e-71
 Identities = 126/227 (55%), Positives = 176/227 (77%)
 Frame = +1

Query: 28   IFEIDYPEWMANVVLVQK*NEKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLR 207
            I E+ YP+W+ N V+V+K N KWRVCID+TDLNKACPKD +PLPHID+L++AT+G  LL 
Sbjct: 811  IVEVRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLS 870

Query: 208  FMDAFFGYPQISMCKKDILKTAFITHRSVYAYKKMTFGLINAGATYQRMMNFIFRGKLRR 387
            FMDAF GY QI M + D  KT FIT +  Y YK M FGL NAGATY R++N +F  +L  
Sbjct: 871  FMDAFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDH 930

Query: 388  NMEVYVDDMIVKSMIVQKHLDDLDECF*TVRNHNLRLNPTKCTFGLGAGKFMGYVVIQRG 567
            +MEVY+DDM+VKS+  ++H+  L +CF  +  +N++LNP+KCTFG+ +G+F+GY+V +RG
Sbjct: 931  SMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRG 990

Query: 568  IEANPEKIQAILNMKTPQSFKDVQCLTGRITALRRFMSKSAERCLQF 708
            IEANP++I AI+++ +P++ ++VQ L GRI AL RF+S+S ++CL F
Sbjct: 991  IEANPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPF 1037


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  274 bits (700), Expect = 2e-71
 Identities = 130/227 (57%), Positives = 173/227 (76%)
 Frame = +1

Query: 28  IFEIDYPEWMANVVLVQK*NEKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLR 207
           I E+ YPEW+AN V+V+K N K RVCID+TDLNKACPKD +PLPHID+L+++T+G  LL 
Sbjct: 50  IREVQYPEWVANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLT 109

Query: 208 FMDAFFGYPQISMCKKDILKTAFITHRSVYAYKKMTFGLINAGATYQRMMNFIFRGKLRR 387
           FMDAF G  QI M  +D  KT+FIT R +Y YK M FGL NAGATYQR++N +F   L +
Sbjct: 110 FMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKMFHNHLGK 169

Query: 388 NMEVYVDDMIVKSMIVQKHLDDLDECF*TVRNHNLRLNPTKCTFGLGAGKFMGYVVIQRG 567
            MEVY+DDM+VKS+  + H+  L+ECF  +  + ++LNP KCTFG+ +G+F+GY+V +RG
Sbjct: 170 TMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLNPAKCTFGVPSGEFLGYIVTERG 229

Query: 568 IEANPEKIQAILNMKTPQSFKDVQCLTGRITALRRFMSKSAERCLQF 708
           IEAN  +I A LNM +P++FK+VQ LTGRI AL RF+S+S ++ L F
Sbjct: 230 IEANSNQINAFLNMPSPRNFKEVQRLTGRIAALNRFISRSTDKSLPF 276


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  273 bits (699), Expect = 3e-71
 Identities = 128/227 (56%), Positives = 173/227 (76%)
 Frame = +1

Query: 28   IFEIDYPEWMANVVLVQK*NEKWRVCIDYTDLNKACPKDFYPLPHIDQLIDATSGYALLR 207
            I E+ YP+W+AN V+V+K N K RVCID+TDLNKACPKD +PLPHID+L+++T+G  LL 
Sbjct: 493  IREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLS 552

Query: 208  FMDAFFGYPQISMCKKDILKTAFITHRSVYAYKKMTFGLINAGATYQRMMNFIFRGKLRR 387
            FMDAF GY QI M  +D  KT FIT R +Y YK M FGL NAGATY R++N +F   + +
Sbjct: 553  FMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATYPRLVNKMFSEHVGK 612

Query: 388  NMEVYVDDMIVKSMIVQKHLDDLDECF*TVRNHNLRLNPTKCTFGLGAGKFMGYVVIQRG 567
             MEVY+DDM++KS+  + H+  L+ECF  +  + ++LNP KCTFG+ +G+F+GY+V +RG
Sbjct: 613  TMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLNPAKCTFGVPSGEFLGYIVTKRG 672

Query: 568  IEANPEKIQAILNMKTPQSFKDVQCLTGRITALRRFMSKSAERCLQF 708
            IEANP +I A LNM +P++FK+VQ LTGRI AL RF+S+S ++ L F
Sbjct: 673  IEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFISRSTDKSLPF 719