BLASTX nr result

ID: Panax21_contig00007216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007216
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27907.3| unnamed protein product [Vitis vinifera]               93   6e-17
ref|XP_002514114.1| conserved hypothetical protein [Ricinus comm...    64   3e-08
ref|XP_002330493.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06

>emb|CBI27907.3| unnamed protein product [Vitis vinifera]
          Length = 1046

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 72/210 (34%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
 Frame = +1

Query: 88  SGNAISPSPAIKTFDAIAPIGEGTPDNVPHWKQLRXXXXXXXXXXXXXXFHPPLVLPPLM 267
           +G  ISP+P+  TF  I+ I EG P  V   K LR               HPPLVLPP+ 
Sbjct: 49  TGYNISPTPS--TFPPISSI-EGRPGVVHRGKSLRSNAPSPSLQINGPALHPPLVLPPIK 105

Query: 268 SAPIPKTTKGXXXXXXXXXXXXXXXNYSAAPPIQG--IVPSLPPSASHGKPPHMEDPGLE 441
           SAP P+ TKG               +Y   P ++    +PS+PPSAS  K P  + P   
Sbjct: 106 SAPAPEMTKGYVPSMPPSNPRMSPPHYKTPPHLKVPITLPSVPPSASQRKAPDNKAPVWA 165

Query: 442 PEAPVT----VPLVPPSRKKPEYPPAI--HXXXXXXXXXXXXXXKAPDNKSPLFTPITLL 603
           P AP+     VP  PP RK P+ PP++  H                PDNK+P+ TP    
Sbjct: 166 PVAPIAPVAPVPDGPPQRKWPQNPPSMHPHPVMPGLLPPSAHNRNKPDNKAPISTP---- 221

Query: 604 QIAPPPREI-LQKPPTSQPIVREVPPTDFP 690
            IAP P    +  PP +    R+  P   P
Sbjct: 222 -IAPDPDVTPISTPPLASHWRRKQMPVAAP 250


>ref|XP_002514114.1| conserved hypothetical protein [Ricinus communis]
           gi|223546570|gb|EEF48068.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1282

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 70/235 (29%), Positives = 85/235 (36%), Gaps = 34/235 (14%)
 Frame = +1

Query: 88  SGNAISPSPAIKTFDAIAPIGEGTPDNVPHWKQLRXXXXXXXXXXXXXXFHPPLVLPPLM 267
           +G  ISPSPAI  F   AP  EGT    P  K L                HPPL LPP M
Sbjct: 27  TGYHISPSPAI--FSETAPT-EGTL--TPFEKPLTSNVLGSVSQPNGLHLHPPLALPPPM 81

Query: 268 SAPIPKTTKGXXXXXXXXXXXXXXXNYSAAPPI--QGIVPSLPPSASHGKPPHMEDP--- 432
           S P+P+  KG               + +A PP+  +G  P L  S     PP+   P   
Sbjct: 82  STPLPQEFKGLVPSHSPSSPVARLLHNTAPPPLNFEGHAPPLSLSIPTVSPPYSAAPPPL 141

Query: 433 ----------------GLEPEAPVTVPLVPPSRK-----------KPEYPPAIHXXXXXX 531
                            L  + PV VP+  PS              PE  P I+      
Sbjct: 142 IVEHELPMPPNASQRKALGRQTPVPVPVAAPSNNLSYDSPMLPPIAPETSPIINPSPPEI 201

Query: 532 XXXXXXXXKAPDNKSPLFTPIT--LLQIAPPPREILQKPPTSQPIVREVPPTDFP 690
                   K   N S   TPIT  +  +A PPRE+ Q  P+S  I     PT  P
Sbjct: 202 SPPSAHHNK---NMSVTGTPITKSIAPVASPPRELRQNQPSSHLIA----PTKMP 249


>ref|XP_002330493.1| predicted protein [Populus trichocarpa] gi|222872427|gb|EEF09558.1|
           predicted protein [Populus trichocarpa]
          Length = 1156

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 53/160 (33%), Positives = 62/160 (38%), Gaps = 25/160 (15%)
 Frame = +1

Query: 100 ISPSPAIKTFDAIAPIGEGTPDNVPHWKQLRXXXXXXXXXXXXXXFHPPLVLPPLMSAPI 279
           IS  P I  F  I PI EGTP   P  +  R               HPPL LPPL SAP+
Sbjct: 33  ISLIPTI--FSDIPPI-EGTPG--PQLQPFRSSVPASESLSTGSNLHPPLALPPLTSAPV 87

Query: 280 PKTTKGXXXXXXXXXXXXXXXNYSAAPPI--QGIVPSLPPSAS------HGKPPHMEDPG 435
           P+T  G               +  A PP+  QG VPSL PS S      +  PP   + G
Sbjct: 88  PQTITGHVPSYSPSPLIVTKPHNRAPPPLISQGHVPSLSPSFSVTSPTYNTAPPPTLNQG 147

Query: 436 LEPEAP-----------------VTVPLVPPSRKKPEYPP 504
            EP  P                  + P   PSR+ PE  P
Sbjct: 148 HEPPKPPNAHRREAAVRQTPVSASSAPAAAPSRQSPENSP 187


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