BLASTX nr result

ID: Panax21_contig00007208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007208
         (1667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275875.1| PREDICTED: transcription factor tau subunit ...   197   7e-48
emb|CBI24753.3| unnamed protein product [Vitis vinifera]              195   3e-47
ref|XP_003537671.1| PREDICTED: general transcription factor 3C p...   147   6e-33
ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general tran...   140   1e-30
ref|XP_003622988.1| General transcription factor 3C polypeptide ...   133   1e-28

>ref|XP_002275875.1| PREDICTED: transcription factor tau subunit sfc1-like [Vitis
           vinifera]
          Length = 568

 Score =  197 bits (501), Expect = 7e-48
 Identities = 95/136 (69%), Positives = 112/136 (82%)
 Frame = +3

Query: 63  SELVPASANVEVQIPNKVQENLFADVIAQVSESYQFNGMVDYQHVLAVHADVARRKKRNW 242
           SE V     VE QI  +V   L AD+IA+VSE+Y FNGMVDYQHVL VHADVARRKKRNW
Sbjct: 92  SESVATGEEVEAQISGEVPIRLCADIIARVSEAYHFNGMVDYQHVLPVHADVARRKKRNW 151

Query: 243 ADVEPQFDKQGLMDVDQEDLMILVPPLFSPKDIPEKVALKPSIDVSLKKKREGLVQNRWE 422
           A+VEP  +K  L+DVDQEDLMIL+PPLFSPKD+PEK+ L+PS+ ++LKKK+EG+VQ RWE
Sbjct: 152 AEVEPHLEKGDLVDVDQEDLMILLPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQQRWE 211

Query: 423 MDIEPCLAIDFNIKDI 470
           M IEPCLAIDF IK+I
Sbjct: 212 MGIEPCLAIDFEIKEI 227


>emb|CBI24753.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score =  195 bits (496), Expect = 3e-47
 Identities = 96/142 (67%), Positives = 114/142 (80%)
 Frame = +3

Query: 51  SQPGSELVPASANVEVQIPNKVQENLFADVIAQVSESYQFNGMVDYQHVLAVHADVARRK 230
           S  G     +S   + QI  +V   L AD+IA+VSE+Y FNGMVDYQHVL VHADVARRK
Sbjct: 87  STDGQSAEVSSKVSKSQISGEVPIRLCADIIARVSEAYHFNGMVDYQHVLPVHADVARRK 146

Query: 231 KRNWADVEPQFDKQGLMDVDQEDLMILVPPLFSPKDIPEKVALKPSIDVSLKKKREGLVQ 410
           KRNWA+VEP  +K  L+DVDQEDLMIL+PPLFSPKD+PEK+ L+PS+ ++LKKK+EG+VQ
Sbjct: 147 KRNWAEVEPHLEKGDLVDVDQEDLMILLPPLFSPKDVPEKLVLRPSMTLNLKKKQEGVVQ 206

Query: 411 NRWEMDIEPCLAIDFNIKDILI 476
            RWEM IEPCLAIDF IKDILI
Sbjct: 207 QRWEMGIEPCLAIDFEIKDILI 228


>ref|XP_003537671.1| PREDICTED: general transcription factor 3C polypeptide 5-like
           [Glycine max]
          Length = 547

 Score =  147 bits (372), Expect = 6e-33
 Identities = 70/117 (59%), Positives = 93/117 (79%), Gaps = 1/117 (0%)
 Frame = +3

Query: 123 NLFADVIAQVSESYQFNGMVDYQHVLAVHADVARRKKRNWADVEP-QFDKQGLMDVDQED 299
           +L AD++A+  E+Y F GM DYQHV+ VHADVARRKKRNW+++E   FDK G MD+D ED
Sbjct: 110 SLCADIVARFPEAYFFYGMADYQHVIPVHADVARRKKRNWSELEELHFDKGGFMDLDHED 169

Query: 300 LMILVPPLFSPKDIPEKVALKPSIDVSLKKKREGLVQNRWEMDIEPCLAIDFNIKDI 470
           +MI+VPP+F+PKD+PE + L+P+   S KKK E +VQ  +EMD+EP LAIDF+IK+I
Sbjct: 170 VMIIVPPIFAPKDVPENLVLRPATMSSSKKKPEEVVQPHFEMDMEPVLAIDFDIKEI 226


>ref|XP_004159095.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
           polypeptide 5-like [Cucumis sativus]
          Length = 592

 Score =  140 bits (352), Expect = 1e-30
 Identities = 70/126 (55%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = +3

Query: 99  QIPNKVQENLFADVIAQVSESYQFNGMVDYQHVLAVHADVARRKKRNWADV-EPQFDKQG 275
           ++P + + NL  +++A+V E+Y F GMVDYQHV+AVHAD  +RKK NWA++ EP+  K  
Sbjct: 98  EVPGEDEVNLDFEMVARVPEAYHFEGMVDYQHVVAVHADATQRKKGNWAEMHEPRLGKSN 157

Query: 276 LMDVDQEDLMILVPPLFSPKDIPEKVALKPSIDVSLKKKREGLVQNRWEMDIEPCLAIDF 455
            +DVD+ED MILVPPLFS KD+PE + LK    + + +K+   VQN  E+DIEP LAIDF
Sbjct: 158 AIDVDKEDTMILVPPLFSIKDVPENLVLKTPA-IYIPRKKSETVQNPCEVDIEPVLAIDF 216

Query: 456 NIKDIL 473
           NIKDIL
Sbjct: 217 NIKDIL 222


>ref|XP_003622988.1| General transcription factor 3C polypeptide [Medicago truncatula]
           gi|355498003|gb|AES79206.1| General transcription factor
           3C polypeptide [Medicago truncatula]
          Length = 612

 Score =  133 bits (335), Expect = 1e-28
 Identities = 75/147 (51%), Positives = 100/147 (68%), Gaps = 6/147 (4%)
 Frame = +3

Query: 51  SQPGSELVPASANVEVQ--IPNKVQE--NLFADVIAQVSESYQFNGMVDYQHVLAVHADV 218
           S  G E    + NVE +    +KV E  NL AD++ +V E+Y F GM DYQ+V+ VHADV
Sbjct: 103 SMCGMEHGMQADNVESEHGAADKVDEEANLCADIVGRVPEAYFFEGMADYQYVVPVHADV 162

Query: 219 ARRKKRNWADVEP-QFDKQGLMDVDQEDLMILVPPLFSPKDIPEKVALKPSIDVSLKKKR 395
           A+RKKRNW++ E     K G +DVD ED+MI+VPP+F+PKD+PE + L+P    S KKK 
Sbjct: 163 AKRKKRNWSEPEETHLAKGGRIDVDHEDIMIIVPPIFAPKDMPEDLLLRPPTVSSSKKKE 222

Query: 396 EGLVQNRWEMDIEPCLAID-FNIKDIL 473
           E +V   +E+D+EP LA+D F IKDIL
Sbjct: 223 EEIVHPHFEIDMEPVLALDFFQIKDIL 249


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