BLASTX nr result

ID: Panax21_contig00007135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007135
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528509.1| nnp-1 protein, putative [Ricinus communis] g...   193   5e-47
ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247...   186   8e-45
emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera]   186   1e-44
ref|XP_002318342.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_003610521.1| Ribosomal RNA processing protein-like protei...   177   3e-42

>ref|XP_002528509.1| nnp-1 protein, putative [Ricinus communis]
            gi|223532069|gb|EEF33878.1| nnp-1 protein, putative
            [Ricinus communis]
          Length = 551

 Score =  193 bits (491), Expect = 5e-47
 Identities = 117/270 (43%), Positives = 157/270 (58%), Gaps = 11/270 (4%)
 Frame = +3

Query: 3    DKDEDVPKLIPIVSSKAEVNVSTSELIPITSDETEVGAXXXXXXXXXXXXXXXXXXXXXX 182
            D D++ P L+PI +++ EV+ S + ++ +T      G+                      
Sbjct: 288  DVDDEAPDLVPI-AAEMEVDGSNNSVVSMTG-----GSHLKKCKKTNKKAKKASGGSNKG 341

Query: 183  TKMKKNRGS-------VEDEDAVIVNGSDSVNERTNEVNVIDFNESVISNLQMQFEKVAA 341
             K KK   S        ED + VI N  +S  E +N  ++I  NESVISNLQMQFEKVAA
Sbjct: 342  KKKKKKNCSGSSDCDTEEDGNKVIPNAINSNEENSNAADMITLNESVISNLQMQFEKVAA 401

Query: 342  EVGLDKDGSNLFDSPTISVKRTIPKKRKRARSVDGQKSQNTDLSGLEVVEGDAAAAKTNE 521
            EVGLDK+  +  D   ++    + KKRKR++S + Q+ +NT+L+  EV     A  K+ E
Sbjct: 402  EVGLDKNVESACDIINVTGNGVVTKKRKRSKSKESQQPENTELTD-EVNADGGATGKSTE 460

Query: 522  KSAKKVRFSIKNNLVWKPHNPMPPQDLRLPPSVTPRGSALKKGLSPGPIKEMPPATXXXX 701
            KSAKKVRFS+KNNLVWKPH+P+PPQ LR+PPSVTPRGSALKKG+ PGPI+EMP AT    
Sbjct: 461  KSAKKVRFSMKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKKGIPPGPIREMPVATKKAK 520

Query: 702  XXXXXXXXXXPI----APAIKRLRKLKALS 779
                       +     P I+R +KLK +S
Sbjct: 521  HKTKSLKKGRKVLSGLVPVIRRPKKLKTVS 550


>ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera]
          Length = 547

 Score =  186 bits (472), Expect = 8e-45
 Identities = 119/268 (44%), Positives = 157/268 (58%), Gaps = 10/268 (3%)
 Frame = +3

Query: 9    DEDVPKLIPIVSSKAEVNVSTSELIPITSDETEVGAXXXXXXXXXXXXXXXXXXXXXXTK 188
            ++++P LIPI   +AEV    SE++    + +   A                       K
Sbjct: 289  EDELPTLIPIAQPEAEVE-GASEVVESVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKK 347

Query: 189  ----MKKNRGSVE-DEDAVIVNGSDSVNERTNEVNVIDFNESVISNLQMQFEKVAAEVGL 353
                + +N  +VE +E+  + N  +S  E +++ ++IDFNESVISNLQMQFEKVAAEVGL
Sbjct: 348  SPDLVSENSATVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGL 407

Query: 354  DKDGSNLFDSPTISVKRTIPKKRKRARSVDGQ--KSQNTDLSGLEVVEGDAAAAKTNEKS 527
              +   L DSPT  V  T+ KKRKRA++ +     SQ  D S        +A AK+  KS
Sbjct: 408  GNELMGLCDSPTRPVNGTVSKKRKRAKNNNEHDVSSQGDDES--------SALAKSKGKS 459

Query: 528  AKKVRFSIKNNLVWKPHNPMPPQDLRLPPSVTPRGSALKKGLSPGPIKEMP---PATXXX 698
            AKKV+FSIKNNLVWKP +P+PPQ LRLPPSVTPRGSALKKG+ PGP++EMP         
Sbjct: 460  AKKVKFSIKNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMPQTKKVKKRA 519

Query: 699  XXXXXXXXXXXPIAPAIKRLRKLKALSI 782
                        I+PAIKRL+KL++LSI
Sbjct: 520  KSLKKGRNGIKSISPAIKRLKKLQSLSI 547


>emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera]
          Length = 547

 Score =  186 bits (471), Expect = 1e-44
 Identities = 119/268 (44%), Positives = 157/268 (58%), Gaps = 10/268 (3%)
 Frame = +3

Query: 9    DEDVPKLIPIVSSKAEVNVSTSELIPITSDETEVGAXXXXXXXXXXXXXXXXXXXXXXTK 188
            ++++P LIPI   +AEV    SE++    + +   A                       K
Sbjct: 289  EDELPTLIPIAQPEAEVE-GASEVVESVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKK 347

Query: 189  ----MKKNRGSVE-DEDAVIVNGSDSVNERTNEVNVIDFNESVISNLQMQFEKVAAEVGL 353
                + +N  +VE +E+  + N  +S  E +++ ++IDFNESVISNLQMQFEKVAAEVGL
Sbjct: 348  SPDLVSENSATVEYNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGL 407

Query: 354  DKDGSNLFDSPTISVKRTIPKKRKRARSVDGQ--KSQNTDLSGLEVVEGDAAAAKTNEKS 527
              +   L DSPT  V  T+ KKRKRA++ +     SQ  D S        +A AK+  KS
Sbjct: 408  GNELMGLCDSPTRLVNGTVSKKRKRAKNNNEHDVSSQGDDES--------SALAKSKGKS 459

Query: 528  AKKVRFSIKNNLVWKPHNPMPPQDLRLPPSVTPRGSALKKGLSPGPIKEMP---PATXXX 698
            AKKV+FSIKNNLVWKP +P+PPQ LRLPPSVTPRGSALKKG+ PGP++EMP         
Sbjct: 460  AKKVKFSIKNNLVWKPQSPLPPQSLRLPPSVTPRGSALKKGIPPGPVREMPQTKKVKKRA 519

Query: 699  XXXXXXXXXXXPIAPAIKRLRKLKALSI 782
                        I+PAIKRL+KL++LSI
Sbjct: 520  KSLKKGRNGIKSISPAIKRLKKLQSLSI 547


>ref|XP_002318342.1| predicted protein [Populus trichocarpa] gi|222859015|gb|EEE96562.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  184 bits (468), Expect = 2e-44
 Identities = 93/183 (50%), Positives = 130/183 (71%), Gaps = 1/183 (0%)
 Frame = +3

Query: 237 NGSDSVNERTNEVNVIDFNESVISNLQMQFEKVAAEVGLDKDGSNLFDSPTISVKRTIPK 416
           NG +S  E+T + N++ F+ES I+NLQ QFEKVAAEVG+D+  +++ D P ++    + K
Sbjct: 363 NGENSSKEKTVDDNLVRFDESAIANLQRQFEKVAAEVGIDEGVTSVCDFPKVTGNGNLSK 422

Query: 417 KRKRARSVDGQKSQNTDLSGLEVVE-GDAAAAKTNEKSAKKVRFSIKNNLVWKPHNPMPP 593
           KRKRA+ V+ ++S+N + +G E  E G +  AK+ EKSAKKVRFS+KNNL+WKP  P+PP
Sbjct: 423 KRKRAKRVELKQSENQESNGQEDDEAGTSTMAKSTEKSAKKVRFSMKNNLIWKPSTPLPP 482

Query: 594 QDLRLPPSVTPRGSALKKGLSPGPIKEMPPATXXXXXXXXXXXXXXPIAPAIKRLRKLKA 773
           Q LR+PPSVTPRGSALKKG+ PGP++EMP                  I+PA KR++KLK+
Sbjct: 483 QSLRIPPSVTPRGSALKKGIPPGPVREMPAKKNMKQRAKSMKKVIKGISPATKRVKKLKS 542

Query: 774 LSI 782
           L++
Sbjct: 543 LAV 545


>ref|XP_003610521.1| Ribosomal RNA processing protein-like protein [Medicago truncatula]
            gi|355511576|gb|AES92718.1| Ribosomal RNA processing
            protein-like protein [Medicago truncatula]
          Length = 546

 Score =  177 bits (450), Expect = 3e-42
 Identities = 106/258 (41%), Positives = 151/258 (58%)
 Frame = +3

Query: 9    DEDVPKLIPIVSSKAEVNVSTSELIPITSDETEVGAXXXXXXXXXXXXXXXXXXXXXXTK 188
            DE+VP L+PIV   A+V V   +L+     E +                         ++
Sbjct: 303  DEEVPDLVPIVEVDADV-VQNGKLLKKCKKEKKGSVDKAKKEKKSKKKNKKSDASGLSSE 361

Query: 189  MKKNRGSVEDEDAVIVNGSDSVNERTNEVNVIDFNESVISNLQMQFEKVAAEVGLDKDGS 368
            M  N     D++A   NG +S++E       +   ESVISNLQ QFEKVAAE GL+   +
Sbjct: 362  M--NSAENGDKNAANENGGNSIDE-------VVLTESVISNLQKQFEKVAAEAGLEDGVA 412

Query: 369  NLFDSPTISVKRTIPKKRKRARSVDGQKSQNTDLSGLEVVEGDAAAAKTNEKSAKKVRFS 548
            +L  +P  +    + KKRKR ++  G+ SQ+ DL+G +    D+A AK+ +KS+KKVRFS
Sbjct: 413  SLCATPKAA--GDVSKKRKRTKNSKGKTSQDFDLNGGDAE--DSAVAKSGDKSSKKVRFS 468

Query: 549  IKNNLVWKPHNPMPPQDLRLPPSVTPRGSALKKGLSPGPIKEMPPATXXXXXXXXXXXXX 728
            +KNNLVWKPH+P+PPQ LR+PPSVTPRGSALK+G+ PGPI+EMP                
Sbjct: 469  MKNNLVWKPHSPLPPQSLRIPPSVTPRGSALKQGVPPGPIREMPLQNKKAKLKKAGRRTI 528

Query: 729  XPIAPAIKRLRKLKALSI 782
              + P++KR++KL++LS+
Sbjct: 529  IGVVPSVKRMKKLRSLSV 546


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