BLASTX nr result

ID: Panax21_contig00007126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007126
         (1850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago t...   154   6e-35
ref|XP_002299678.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215...   152   4e-34
gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]             152   4e-34
ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|2235369...   150   8e-34

>ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 491

 Score =  154 bits (390), Expect = 6e-35
 Identities = 73/91 (80%), Positives = 84/91 (92%)
 Frame = -3

Query: 273 EMSEDIEYRCFVGGLSWSTSDRVLKEAFEKFGNLVEAKVVVDKESGRSRGFGFVTFDDRQ 94
           +MS+  E+RCF+GGL+WSTSDR LK+AFEK+G LVEAKVVVDK SGRSRGFGFVTFDD++
Sbjct: 222 QMSDTDEFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKE 281

Query: 93  AMDDAIEAMNGIDLDGRNITVDKAQPQGGRD 1
           AM++AIEAMNGIDLDGR ITVDKAQPQG RD
Sbjct: 282 AMEEAIEAMNGIDLDGRTITVDKAQPQGSRD 312


>ref|XP_002299678.1| predicted protein [Populus trichocarpa] gi|222846936|gb|EEE84483.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score =  152 bits (385), Expect = 2e-34
 Identities = 72/88 (81%), Positives = 82/88 (93%)
 Frame = -3

Query: 270 MSEDIEYRCFVGGLSWSTSDRVLKEAFEKFGNLVEAKVVVDKESGRSRGFGFVTFDDRQA 91
           MSE++EYRCF+GGLSWSTSDR LKE FEKFG+L+EAKVVVDK SGRSRGFGFVTFD+++A
Sbjct: 1   MSEELEYRCFIGGLSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60

Query: 90  MDDAIEAMNGIDLDGRNITVDKAQPQGG 7
           M+DAIE MNG+DLDGR ITVDKAQPQ G
Sbjct: 61  MEDAIEGMNGMDLDGRTITVDKAQPQQG 88


>ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
           gi|449478936|ref|XP_004155458.1| PREDICTED:
           uncharacterized protein LOC101227324 [Cucumis sativus]
          Length = 211

 Score =  152 bits (383), Expect = 4e-34
 Identities = 71/88 (80%), Positives = 84/88 (95%)
 Frame = -3

Query: 270 MSEDIEYRCFVGGLSWSTSDRVLKEAFEKFGNLVEAKVVVDKESGRSRGFGFVTFDDRQA 91
           M++++EYRCF+GGLSWSTSDR LKEAFEKFG+LVEAKVVVDK SGRSRGFGFVTFD+++A
Sbjct: 1   MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKA 60

Query: 90  MDDAIEAMNGIDLDGRNITVDKAQPQGG 7
           MD+AI+AMNG+DLDGR+ITVDKAQP  G
Sbjct: 61  MDEAIKAMNGMDLDGRSITVDKAQPNQG 88


>gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
          Length = 202

 Score =  152 bits (383), Expect = 4e-34
 Identities = 73/88 (82%), Positives = 82/88 (93%)
 Frame = -3

Query: 270 MSEDIEYRCFVGGLSWSTSDRVLKEAFEKFGNLVEAKVVVDKESGRSRGFGFVTFDDRQA 91
           MSE+ EYRCF+G LSWSTSDR LK+AFEKFGNLV+AKVV+DK SGRSRGFGFVTFDD++A
Sbjct: 1   MSEEDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRA 60

Query: 90  MDDAIEAMNGIDLDGRNITVDKAQPQGG 7
           M+DAIEAMNG+DLDGR ITVDKAQPQ G
Sbjct: 61  MEDAIEAMNGMDLDGRAITVDKAQPQQG 88


>ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|223536978|gb|EEF38615.1| dc50,
           putative [Ricinus communis]
          Length = 210

 Score =  150 bits (380), Expect = 8e-34
 Identities = 71/88 (80%), Positives = 82/88 (93%)
 Frame = -3

Query: 270 MSEDIEYRCFVGGLSWSTSDRVLKEAFEKFGNLVEAKVVVDKESGRSRGFGFVTFDDRQA 91
           MSE++EYRCF+GGLSWSTSDR LKEAFEKFG+L+EAKVVVDK SGRSRGFGFVTFD+++A
Sbjct: 1   MSEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKA 60

Query: 90  MDDAIEAMNGIDLDGRNITVDKAQPQGG 7
           M++AIE MNG+DLDGR ITVDKAQP  G
Sbjct: 61  MEEAIEEMNGMDLDGRTITVDKAQPHQG 88


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