BLASTX nr result

ID: Panax21_contig00007105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007105
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   231   7e-59
emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]   231   7e-59
emb|CBI23303.3| unnamed protein product [Vitis vinifera]              228   3e-58
ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   216   1e-54
ref|XP_002305651.1| f-box family protein [Populus trichocarpa] g...   214   6e-54

>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  231 bits (588), Expect = 7e-59
 Identities = 119/156 (76%), Positives = 130/156 (83%), Gaps = 6/156 (3%)
 Frame = -2

Query: 452 MDPKDSVDSPDSTPLL---PFQDKLLEKVLALVESHKDRNSVSQVCKDLYNAERLSRTRV 282
           MD K   DSP+S  L    PF D++LE+VL LV+SHKDR+SVS VCKD YNAER SRT V
Sbjct: 1   MDSKRKKDSPESNELTRSSPFPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHV 60

Query: 281 FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSDFNLVPQNWGADIHSWLVVFAEVYPLLE 102
           FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSDFNLVP NWGADIH+WLVVFA  YPLLE
Sbjct: 61  FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSDFNLVPLNWGADIHAWLVVFASKYPLLE 120

Query: 101 ELKLKRMYVSDESLELM---FSGFKALFLLSCDGFS 3
           EL+LKRM V+DESLE +   F+ FKAL LLSCDGFS
Sbjct: 121 ELRLKRMTVTDESLEFLATTFTNFKALSLLSCDGFS 156


>emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]
          Length = 620

 Score =  231 bits (588), Expect = 7e-59
 Identities = 119/156 (76%), Positives = 130/156 (83%), Gaps = 6/156 (3%)
 Frame = -2

Query: 452 MDPKDSVDSPDSTPLL---PFQDKLLEKVLALVESHKDRNSVSQVCKDLYNAERLSRTRV 282
           MD K   DSP+S  L    PF D++LE+VL LV+SHKDR+SVS VCKD YNAER SRT V
Sbjct: 1   MDSKRKKDSPESNELTRSSPFPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHV 60

Query: 281 FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSDFNLVPQNWGADIHSWLVVFAEVYPLLE 102
           FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSDFNLVP NWGADIH+WLVVFA  YPLLE
Sbjct: 61  FIGNCYSVSPEIVARRFPNIRSVTLKGKPRFSDFNLVPLNWGADIHAWLVVFASKYPLLE 120

Query: 101 ELKLKRMYVSDESLELM---FSGFKALFLLSCDGFS 3
           EL+LKRM V+DESLE +   F+ FKAL LLSCDGFS
Sbjct: 121 ELRLKRMTVTDESLEFLATTFTNFKALSLLSCDGFS 156


>emb|CBI23303.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  228 bits (582), Expect = 3e-58
 Identities = 116/150 (77%), Positives = 128/150 (85%), Gaps = 3/150 (2%)
 Frame = -2

Query: 443 KDSVDSPDSTPLLPFQDKLLEKVLALVESHKDRNSVSQVCKDLYNAERLSRTRVFIGNCY 264
           KDS +S + T   PF D++LE+VL LV+SHKDR+SVS VCKD YNAER SRT VFIGNCY
Sbjct: 10  KDSPESNELTRSSPFPDEVLERVLGLVKSHKDRSSVSLVCKDWYNAERWSRTHVFIGNCY 69

Query: 263 SVSPEIVARRFPNIRSVTLKGKPRFSDFNLVPQNWGADIHSWLVVFAEVYPLLEELKLKR 84
           SVSPEIVARRFPNIRSVTLKGKPRFSDFNLVP NWGADIH+WLVVFA  YPLLEEL+LKR
Sbjct: 70  SVSPEIVARRFPNIRSVTLKGKPRFSDFNLVPLNWGADIHAWLVVFASKYPLLEELRLKR 129

Query: 83  MYVSDESLELM---FSGFKALFLLSCDGFS 3
           M V+DESLE +   F+ FKAL LLSCDGFS
Sbjct: 130 MTVTDESLEFLATTFTNFKALSLLSCDGFS 159


>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 589

 Score =  216 bits (551), Expect = 1e-54
 Identities = 111/144 (77%), Positives = 121/144 (84%), Gaps = 3/144 (2%)
 Frame = -2

Query: 425 PDSTPLLPFQDKLLEKVLALVESHKDRNSVSQVCKDLYNAERLSRTRVFIGNCYSVSPEI 246
           PDST    F D++LE+VL L++S+KDR+SVS VCKD YNAER SRT VFIGNCYSVSPEI
Sbjct: 16  PDSTRTSQFPDEVLERVLGLLKSNKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEI 75

Query: 245 VARRFPNIRSVTLKGKPRFSDFNLVPQNWGADIHSWLVVFAEVYPLLEELKLKRMYVSDE 66
           VARRFP IRSVTLKGKPRFSDFNLVP+NWGADI SWLVVFA  YP LEEL+LKRM V+DE
Sbjct: 76  VARRFPKIRSVTLKGKPRFSDFNLVPRNWGADIQSWLVVFASKYPFLEELRLKRMTVNDE 135

Query: 65  SLE---LMFSGFKALFLLSCDGFS 3
           SLE   L F  FKAL LLSCDGFS
Sbjct: 136 SLEFLSLNFPNFKALSLLSCDGFS 159


>ref|XP_002305651.1| f-box family protein [Populus trichocarpa]
           gi|222848615|gb|EEE86162.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score =  214 bits (545), Expect = 6e-54
 Identities = 107/143 (74%), Positives = 120/143 (83%), Gaps = 3/143 (2%)
 Frame = -2

Query: 422 DSTPLLPFQDKLLEKVLALVESHKDRNSVSQVCKDLYNAERLSRTRVFIGNCYSVSPEIV 243
           DST   PF D++LE+VL+L++SHKDR++VS VCKD YNAE  SRT VFIGNCYSVSPEIV
Sbjct: 7   DSTRSSPFPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVFIGNCYSVSPEIV 66

Query: 242 ARRFPNIRSVTLKGKPRFSDFNLVPQNWGADIHSWLVVFAEVYPLLEELKLKRMYVSDES 63
           ARRFP I+SVTLKGKPRFSDFNLVP+NWGAD+H WLVVFA  YP LEEL+LKRM VSDES
Sbjct: 67  ARRFPIIKSVTLKGKPRFSDFNLVPENWGADVHPWLVVFATKYPFLEELRLKRMAVSDES 126

Query: 62  LELM---FSGFKALFLLSCDGFS 3
           LE +   F  FK L LLSCDGFS
Sbjct: 127 LEFLAVNFPNFKVLSLLSCDGFS 149


Top