BLASTX nr result

ID: Panax21_contig00007082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007082
         (1087 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis ...   461   e-127
ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis ...   455   e-126
ref|XP_002529478.1| protein with unknown function [Ricinus commu...   452   e-125
gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]         441   e-121
gb|AFK42529.1| unknown [Lotus japonicus]                              434   e-119

>ref|XP_002271000.1| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 444

 Score =  461 bits (1186), Expect = e-127
 Identities = 225/348 (64%), Positives = 275/348 (79%)
 Frame = +3

Query: 42   KMGLESVGGLAIHIILSKLGPKETATVACVSQRFRVWASDDSLWSKFCAEELDLSSPENP 221
            +MGLE +G LAI+ I+SKL  K+T  V+CVS++ RV AS++SLW   C+++L LS+P +P
Sbjct: 2    EMGLEDLGDLAINAIISKLDTKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDP 61

Query: 222  LGIPSPSFRAAYQAWREAFGMYPWSLVRRVKICWGRIKGWLTVNFPEAVTTLRKGATEEE 401
            LG P+PSF+  Y+ WRE+FGMYPW LV+RVK CW R+K WL+ NFPEA  TLRKGATE E
Sbjct: 62   LGKPAPSFKETYRLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPEADATLRKGATEVE 121

Query: 402  IKNFEKSLKVKLPLPTRVLYRFCDGQELAREEVSGSLFGSPLGLIGGYSFYDHTVNVFLL 581
            I+  E  LKVKLPLPTR+LYRFCDGQEL  ++V G+  GS LG+IGGY FYDH VNV LL
Sbjct: 122  IEALENILKVKLPLPTRLLYRFCDGQELT-DDVGGTALGSSLGIIGGYCFYDHLVNVCLL 180

Query: 582  PLKQVTRESKGINFHLGFSSRAKYLVVAASSTFNEKIFFFNCNNGQLYVGMRNLSTDGEM 761
            PL+QV  E+K I   LGFS+ +KY++VAASST+  K FF NC  GQLYVG R+L + GEM
Sbjct: 181  PLRQVILETKEITDQLGFSTTSKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSAGEM 240

Query: 762  IPCVPNASICLVHDAKGNQQQDAMLLWLEEHVRRLETGLIKLKVEGNVRSINLFPEQPSS 941
            IPCVPNA I  +HD+   QQQDAMLLWLEEHVRRL+ G+IKL+ EG +RSINLFPE+   
Sbjct: 241  IPCVPNALISPMHDSNTGQQQDAMLLWLEEHVRRLQNGIIKLRNEGMIRSINLFPEESPL 300

Query: 942  CSTAVTDGVQVRASAVFLPE*SDLQEESEKYLFTYSVRMSLLPEGCVV 1085
            CSTAVT+GVQVRASAVF+PE  +L +ES KYLF YS+RM LLPEGC+V
Sbjct: 301  CSTAVTNGVQVRASAVFIPEGCNLLDESHKYLFAYSIRMRLLPEGCIV 348


>ref|XP_002271295.2| PREDICTED: F-box protein SKIP16-like [Vitis vinifera]
          Length = 443

 Score =  455 bits (1171), Expect = e-126
 Identities = 219/347 (63%), Positives = 271/347 (78%)
 Frame = +3

Query: 45   MGLESVGGLAIHIILSKLGPKETATVACVSQRFRVWASDDSLWSKFCAEELDLSSPENPL 224
            M LE +G LAI+ I+SKL  K+T  V+CVS++ RV AS++SLW   C+++L LS+P +PL
Sbjct: 1    MRLEDLGDLAINAIISKLDAKDTVAVSCVSKKLRVSASEESLWLNHCSQDLGLSAPIDPL 60

Query: 225  GIPSPSFRAAYQAWREAFGMYPWSLVRRVKICWGRIKGWLTVNFPEAVTTLRKGATEEEI 404
            G P+PSF+  YQ WRE+FGMYPW LV+RVK CW R+K WL+ NFP+A  TLRKGATE EI
Sbjct: 61   GKPAPSFKETYQLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPDADATLRKGATEVEI 120

Query: 405  KNFEKSLKVKLPLPTRVLYRFCDGQELAREEVSGSLFGSPLGLIGGYSFYDHTVNVFLLP 584
            +  E  LKVKLPLPTR+LYRFCDGQEL  E+V G+  G  LG++GGY   DH VNV LLP
Sbjct: 121  EALENILKVKLPLPTRLLYRFCDGQELTEEDVGGTALGGSLGIMGGYCCNDHLVNVCLLP 180

Query: 585  LKQVTRESKGINFHLGFSSRAKYLVVAASSTFNEKIFFFNCNNGQLYVGMRNLSTDGEMI 764
            L+QV  E+K I   LGFS+ +KY++VAASST+  K FF NC  GQLYVG R+L + GEMI
Sbjct: 181  LRQVILETKEITDQLGFSTTSKYVIVAASSTYIGKFFFLNCTTGQLYVGTRSLVSAGEMI 240

Query: 765  PCVPNASICLVHDAKGNQQQDAMLLWLEEHVRRLETGLIKLKVEGNVRSINLFPEQPSSC 944
            PCVPNA I  +HD    QQQDAMLLWLEEHVRRL+ G+IKL+ EG +RSINLFPE+P  C
Sbjct: 241  PCVPNALISPMHDMNTGQQQDAMLLWLEEHVRRLQNGIIKLRKEGMIRSINLFPEEPPLC 300

Query: 945  STAVTDGVQVRASAVFLPE*SDLQEESEKYLFTYSVRMSLLPEGCVV 1085
            STAVT+G+QVRASAVF+PE  +L+++S KY+F YS+RM LLPEGC+V
Sbjct: 301  STAVTNGIQVRASAVFIPEGCNLRDKSHKYVFAYSIRMRLLPEGCIV 347


>ref|XP_002529478.1| protein with unknown function [Ricinus communis]
            gi|223531036|gb|EEF32888.1| protein with unknown function
            [Ricinus communis]
          Length = 446

 Score =  452 bits (1162), Expect = e-125
 Identities = 223/350 (63%), Positives = 272/350 (77%), Gaps = 3/350 (0%)
 Frame = +3

Query: 45   MGLESVGGLAIHIILSKLGPKETATVACVSQRFRVWASDDSLWSKFCAEELDLSSPENPL 224
            MGLE+VG LA++ ILS LGP+ETA VACVS+R +  AS++SLWSKFC ++L LSSP +P 
Sbjct: 1    MGLEAVGDLALNEILSILGPEETAIVACVSKRLKASASEESLWSKFCFQDLHLSSPLDPH 60

Query: 225  GIPSPSFRAAYQAWREAFGMYPWSLVRRVKICWGRIKGWLTVNFPEAVTTLRKGATEEEI 404
            G P PSF+ AY +WREAF MYPW LV+RVK CW R+K WLT NFPEA  TL++GATE+EI
Sbjct: 61   GNPLPSFKFAYGSWREAFAMYPWPLVKRVKRCWDRLKNWLTTNFPEAAATLQQGATEDEI 120

Query: 405  KNFEKSLKVKLPLPTRVLYRFCDGQELAREEVSGSLFGSPLGLIGGYSFYDHTVNVFLLP 584
            + FEK L+VKLPLPTRVLYRF +GQ    ++   S  G+ LGLIGGY+FY H VNV+LLP
Sbjct: 121  RRFEKVLEVKLPLPTRVLYRFYNGQVFQEKDALTSAHGNNLGLIGGYAFYHHLVNVYLLP 180

Query: 585  LKQVTRESKGINFHLGFS---SRAKYLVVAASSTFNEKIFFFNCNNGQLYVGMRNLSTDG 755
            L QV  E+K I  HLG S   +  KY+VVAASS F EK FF NC NGQLYVG RNL  DG
Sbjct: 181  LDQVILETKQIVCHLGISGGFNSTKYIVVAASSAFIEKFFFLNCTNGQLYVGTRNLPIDG 240

Query: 756  EMIPCVPNASICLVHDAKGNQQQDAMLLWLEEHVRRLETGLIKLKVEGNVRSINLFPEQP 935
            EM+PCVPNA +  VHD   +QQ+D MLLWLEEH RRL+ G+IKL+ E N+R+I  FPE+P
Sbjct: 241  EMMPCVPNALLRSVHDPSSDQQRDGMLLWLEEHGRRLQDGIIKLREERNIRTICQFPEEP 300

Query: 936  SSCSTAVTDGVQVRASAVFLPE*SDLQEESEKYLFTYSVRMSLLPEGCVV 1085
             SCSTA+T+GV+VRASA+F+PE +DL   S+KY F YS+RMSLLP+GC+V
Sbjct: 301  PSCSTAITNGVKVRASAIFVPEAADLDGGSDKYWFAYSIRMSLLPDGCIV 350


>gb|ACB87912.1| F-box-containing protein 2 [Malus x domestica]
          Length = 443

 Score =  441 bits (1133), Expect = e-121
 Identities = 210/347 (60%), Positives = 268/347 (77%)
 Frame = +3

Query: 45   MGLESVGGLAIHIILSKLGPKETATVACVSQRFRVWASDDSLWSKFCAEELDLSSPENPL 224
            M LE+VG LA+HIILSKLG +++A  ACVS + R  ASD+SLWS FCA +L LS P +PL
Sbjct: 1    MNLEAVGDLALHIILSKLGAEDSAKAACVSTKLRASASDESLWSLFCARDLHLSQPLDPL 60

Query: 225  GIPSPSFRAAYQAWREAFGMYPWSLVRRVKICWGRIKGWLTVNFPEAVTTLRKGATEEEI 404
            G  +PSF+ +YQ WR  F MYPWSLV+RVK CW +I+ WLT+NFPEAV+TL+KGA+E +I
Sbjct: 61   GNLAPSFKESYQLWRVTFKMYPWSLVKRVKRCWDKIRNWLTINFPEAVSTLKKGASEADI 120

Query: 405  KNFEKSLKVKLPLPTRVLYRFCDGQELAREEVSGSLFGSPLGLIGGYSFYDHTVNVFLLP 584
            +  EK LKVKLPLPTR+LYRF +GQ    +    +L G PLGLIGGY+FYD  V V+L+P
Sbjct: 121  QEVEKILKVKLPLPTRILYRFHNGQAFEEKHFQNNLVGCPLGLIGGYAFYDQLVTVYLMP 180

Query: 585  LKQVTRESKGINFHLGFSSRAKYLVVAASSTFNEKIFFFNCNNGQLYVGMRNLSTDGEMI 764
            L+QV  E+  I   LGF+ R++Y+VVA S  ++ K+FF NC +GQLYVG RNL TDG+M+
Sbjct: 181  LRQVVLETMKIRRKLGFTGRSEYVVVADSCAYSGKLFFLNCTSGQLYVGTRNLPTDGQML 240

Query: 765  PCVPNASICLVHDAKGNQQQDAMLLWLEEHVRRLETGLIKLKVEGNVRSINLFPEQPSSC 944
            PCVP+A I  +HD   ++QQD MLLWLEEH RRLE G+IKL+ E N R+I+ FPE+   C
Sbjct: 241  PCVPDALISSIHDCNVDRQQDGMLLWLEEHGRRLENGIIKLRQEENFRTISQFPEESPLC 300

Query: 945  STAVTDGVQVRASAVFLPE*SDLQEESEKYLFTYSVRMSLLPEGCVV 1085
            STA+T+GV+VRASAVF+PE +DL+  SEKY F+YS+RMS LPEGCV+
Sbjct: 301  STAITNGVKVRASAVFVPECADLENTSEKYTFSYSIRMSFLPEGCVI 347


>gb|AFK42529.1| unknown [Lotus japonicus]
          Length = 444

 Score =  434 bits (1115), Expect = e-119
 Identities = 217/348 (62%), Positives = 260/348 (74%), Gaps = 1/348 (0%)
 Frame = +3

Query: 45   MGLESVGGLAIHIILSKLGPKETATVACVSQRFRVWA-SDDSLWSKFCAEELDLSSPENP 221
            MGLE+V  LAIH +L +L P++ A VACVS++ R  A  DDSLW   C  ELDL  P + 
Sbjct: 2    MGLETVVDLAIHDVLRRLSPEDIARVACVSKKLRSLAFDDDSLWLTICISELDLHQPLDH 61

Query: 222  LGIPSPSFRAAYQAWREAFGMYPWSLVRRVKICWGRIKGWLTVNFPEAVTTLRKGATEEE 401
            LG P PSF+A YQAWREAF MYPWSLV+RVK CW ++K WL  NFPEA  TL KGA+E E
Sbjct: 62   LGNPLPSFKATYQAWREAFAMYPWSLVKRVKQCWDKLKTWLVNNFPEAEATLCKGASEAE 121

Query: 402  IKNFEKSLKVKLPLPTRVLYRFCDGQELAREEVSGSLFGSPLGLIGGYSFYDHTVNVFLL 581
            I   E  L+VKLPLPTR+LYRF +GQE+A  ++    FGS LGLIGGYSFY H VNV+LL
Sbjct: 122  ILELENVLEVKLPLPTRILYRFHNGQEIANGDLESDTFGSSLGLIGGYSFYSHLVNVYLL 181

Query: 582  PLKQVTRESKGINFHLGFSSRAKYLVVAASSTFNEKIFFFNCNNGQLYVGMRNLSTDGEM 761
            PL+QV  E++ +  HLGF  R+KY++VAASST NEK+FF NC +GQLYVG R   T  ++
Sbjct: 182  PLRQVILETQNLTRHLGFLRRSKYVLVAASSTQNEKLFFLNCIDGQLYVGTRTFFTSEDL 241

Query: 762  IPCVPNASICLVHDAKGNQQQDAMLLWLEEHVRRLETGLIKLKVEGNVRSINLFPEQPSS 941
            IPCVP+  I L H     QQQDAMLLW EEH RRL+ G IKL  EGN RSINLFPE+P  
Sbjct: 242  IPCVPHNLISL-HGLNNEQQQDAMLLWFEEHGRRLQQGFIKLHEEGNNRSINLFPEEPPL 300

Query: 942  CSTAVTDGVQVRASAVFLPE*SDLQEESEKYLFTYSVRMSLLPEGCVV 1085
            CST +T+GVQVRASA+F+PE SDLQ++ EKYLF YS+RMSL PEGC++
Sbjct: 301  CSTVITNGVQVRASALFVPELSDLQDDLEKYLFAYSIRMSLHPEGCII 348


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