BLASTX nr result

ID: Panax21_contig00007079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007079
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29799.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi...   391   e-106
ref|XP_002323271.1| chromatin remodeling complex subunit [Populu...   367   2e-99
ref|XP_002533848.1| ATP binding protein, putative [Ricinus commu...   363   4e-98
ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2...   362   1e-97

>emb|CBI29799.3| unnamed protein product [Vitis vinifera]
          Length = 1557

 Score =  391 bits (1005), Expect = e-106
 Identities = 204/339 (60%), Positives = 249/339 (73%)
 Frame = -1

Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839
            G+Q+PITYK+PK+V++E++QSSG + S  R GV R+ F K FNIFS  N+++S+L QE +
Sbjct: 929  GAQNPITYKVPKLVHQEVMQSSGIISSTARRGVHRETFLKHFNIFSPVNIYQSVLPQENN 988

Query: 838  SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659
            S+GS  +S TFGF   +DLSP E+AFL +G+ MER+LF IMRWDR++LDG+LDL MEAE 
Sbjct: 989  SNGSAVKSGTFGFTHLMDLSPEEVAFLATGTFMERLLFFIMRWDRQFLDGILDLLMEAEE 1048

Query: 658  DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479
            +    S L   KVRAVTRMLL+PS+SET L RR+ AT     P+EALV+ HQDRL +N R
Sbjct: 1049 EDFSNSHLDSGKVRAVTRMLLMPSRSETNLLRRKLATGLGHAPFEALVVPHQDRLQANTR 1108

Query: 478  LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299
            L+H+ Y+FIP TRAPPIN HC++RNFAY +LEELHHPW KRL IGFARTSDY+GP+KP  
Sbjct: 1109 LVHATYTFIPRTRAPPINAHCSNRNFAYKLLEELHHPWLKRLFIGFARTSDYNGPKKPDV 1168

Query: 298  PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119
            PHHLIQEIDS+LPVS+PA                 +F +S  +Q     K L        
Sbjct: 1169 PHHLIQEIDSELPVSKPA-----------LQLTYKIFGSSPPMQSFDPAKLLT------- 1210

Query: 118  LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2
               DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE
Sbjct: 1211 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1246


>ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera]
          Length = 1563

 Score =  391 bits (1005), Expect = e-106
 Identities = 204/339 (60%), Positives = 249/339 (73%)
 Frame = -1

Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839
            G+Q+PITYK+PK+V++E++QSSG + S  R GV R+ F K FNIFS  N+++S+L QE +
Sbjct: 929  GAQNPITYKVPKLVHQEVMQSSGIISSTARRGVHRETFLKHFNIFSPVNIYQSVLPQENN 988

Query: 838  SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659
            S+GS  +S TFGF   +DLSP E+AFL +G+ MER+LF IMRWDR++LDG+LDL MEAE 
Sbjct: 989  SNGSAVKSGTFGFTHLMDLSPEEVAFLATGTFMERLLFFIMRWDRQFLDGILDLLMEAEE 1048

Query: 658  DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479
            +    S L   KVRAVTRMLL+PS+SET L RR+ AT     P+EALV+ HQDRL +N R
Sbjct: 1049 EDFSNSHLDSGKVRAVTRMLLMPSRSETNLLRRKLATGLGHAPFEALVVPHQDRLQANTR 1108

Query: 478  LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299
            L+H+ Y+FIP TRAPPIN HC++RNFAY +LEELHHPW KRL IGFARTSDY+GP+KP  
Sbjct: 1109 LVHATYTFIPRTRAPPINAHCSNRNFAYKLLEELHHPWLKRLFIGFARTSDYNGPKKPDV 1168

Query: 298  PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119
            PHHLIQEIDS+LPVS+PA                 +F +S  +Q     K L        
Sbjct: 1169 PHHLIQEIDSELPVSKPA-----------LQLTYKIFGSSPPMQSFDPAKLLT------- 1210

Query: 118  LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2
               DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE
Sbjct: 1211 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1246


>ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222867901|gb|EEF05032.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1540

 Score =  367 bits (942), Expect = 2e-99
 Identities = 201/340 (59%), Positives = 242/340 (71%), Gaps = 1/340 (0%)
 Frame = -1

Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839
            G ++PITYKIPK+V+ E++QSS  L SA+  G  R+ F+K FNIFS+ENV+RS+   + S
Sbjct: 934  GGRNPITYKIPKVVHNEIVQSSEVLCSAIGRGFGRESFQKHFNIFSSENVYRSVFALDNS 993

Query: 838  SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFM-EAE 662
            SD    +S TFGF+  +DLSPAE+AFL   S MER+LF IMRW R++LDG+LDL M + E
Sbjct: 994  SDSLLIKSGTFGFSHLMDLSPAEVAFLAISSFMERLLFFIMRWGRRFLDGILDLLMKDIE 1053

Query: 661  SDGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNI 482
            +D S  + L + KVRAVTRMLL+PS+SET + RR+ AT P D P+EALV SHQDRL SNI
Sbjct: 1054 NDHS--NYLEKHKVRAVTRMLLMPSRSETDILRRKMATGPADTPFEALVNSHQDRLLSNI 1111

Query: 481  RLLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPT 302
            +LLHS Y+FIP TRAPPI G C+DRNFAY ++EELH P  KRLL GFARTS ++GPRKP 
Sbjct: 1112 KLLHSTYTFIPRTRAPPIGGQCSDRNFAYQMMEELHQPMVKRLLTGFARTSTFNGPRKPE 1171

Query: 301  GPHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHN 122
              H LIQEIDS+LPVSQPA                 +F +   +Q     K L       
Sbjct: 1172 PLHPLIQEIDSELPVSQPA-----------LQLTYKIFGSCPPMQSFDPAKLLT------ 1214

Query: 121  MLS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2
                DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE
Sbjct: 1215 ----DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1250


>ref|XP_002533848.1| ATP binding protein, putative [Ricinus communis]
            gi|223526215|gb|EEF28539.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1339

 Score =  363 bits (932), Expect = 4e-98
 Identities = 192/339 (56%), Positives = 242/339 (71%)
 Frame = -1

Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839
            G+++PITY+IPK+V++E   SS  L SAV HGV  + F + FNIFS  N+++S+ +QE +
Sbjct: 864  GARNPITYQIPKLVHKET--SSEALCSAVGHGVCGERFLELFNIFSPANIYQSLFRQEDT 921

Query: 838  SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659
            S+    +S TFGF   +DLSP E+ FL +GS+MER+LFSI+RW+R++LDG+L+L +E   
Sbjct: 922  SNSLLVKSGTFGFTHLMDLSPTEVTFLATGSLMERLLFSILRWNRQFLDGILNLLVEDMD 981

Query: 658  DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479
            D S  +   REKVR VTRMLL+PS+SET + RRR AT P + P+EALV SHQDR+ SNI+
Sbjct: 982  DDSHYNDFEREKVRVVTRMLLMPSRSETNVLRRRFATGPVETPFEALVTSHQDRILSNIK 1041

Query: 478  LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299
            LLHS Y+FIP  RAPPI   C+DRNFAY ++EELH PW KRLL+GFARTS+++GPRKP G
Sbjct: 1042 LLHSVYTFIPRARAPPIFAQCSDRNFAYKMIEELHQPWVKRLLLGFARTSEFNGPRKPDG 1101

Query: 298  PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119
            PH L+QEID +LPVSQPA                 +F +   +Q     K L        
Sbjct: 1102 PHPLVQEIDCELPVSQPA-----------LQLTYNIFGSCPPMQSFDPAKLLT------- 1143

Query: 118  LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2
               DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE
Sbjct: 1144 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1179


>ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max]
          Length = 1542

 Score =  362 bits (928), Expect = 1e-97
 Identities = 192/339 (56%), Positives = 238/339 (70%)
 Frame = -1

Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839
            G  +PI+Y+IPK+VY+E+IQSS TL SAV   VSR+ F K FNIF  ENV+RS+      
Sbjct: 937  GGHNPISYEIPKLVYQEIIQSSETLSSAVGPVVSRESFHKHFNIFRPENVYRSVF----- 991

Query: 838  SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659
            S+  +++S  FGF   +DLSP E+ FL +GS MER+LFS+MRW++K++D  +D   E   
Sbjct: 992  SEDMYSKSGNFGFTHMMDLSPQEVTFLATGSFMERLLFSMMRWEQKFIDEAVDFLTETID 1051

Query: 658  DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479
            D   CS L +EKVRAVTRMLL+PS+SET + +++  T P   P+EALV+ HQDR+ SN R
Sbjct: 1052 DDPECSYLEKEKVRAVTRMLLVPSRSETLVLQKKLQTGPSHAPFEALVVPHQDRVLSNAR 1111

Query: 478  LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299
            LLHSAY++IP +RAPPI  HC+DRNF Y ++EELH PW KRLL+GFARTSD +GPRKP  
Sbjct: 1112 LLHSAYTYIPQSRAPPIGAHCSDRNFCYKMIEELHDPWIKRLLVGFARTSDNNGPRKPDS 1171

Query: 298  PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119
            PHHLIQEIDS+LPVSQPA                 +F +S  ++     K L        
Sbjct: 1172 PHHLIQEIDSELPVSQPA-----------LELTHSIFGSSPPMRNFDPAKLLT------- 1213

Query: 118  LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2
               DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE
Sbjct: 1214 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1249


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