BLASTX nr result
ID: Panax21_contig00007079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00007079 (1018 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29799.3| unnamed protein product [Vitis vinifera] 391 e-106 ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vi... 391 e-106 ref|XP_002323271.1| chromatin remodeling complex subunit [Populu... 367 2e-99 ref|XP_002533848.1| ATP binding protein, putative [Ricinus commu... 363 4e-98 ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2... 362 1e-97 >emb|CBI29799.3| unnamed protein product [Vitis vinifera] Length = 1557 Score = 391 bits (1005), Expect = e-106 Identities = 204/339 (60%), Positives = 249/339 (73%) Frame = -1 Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839 G+Q+PITYK+PK+V++E++QSSG + S R GV R+ F K FNIFS N+++S+L QE + Sbjct: 929 GAQNPITYKVPKLVHQEVMQSSGIISSTARRGVHRETFLKHFNIFSPVNIYQSVLPQENN 988 Query: 838 SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659 S+GS +S TFGF +DLSP E+AFL +G+ MER+LF IMRWDR++LDG+LDL MEAE Sbjct: 989 SNGSAVKSGTFGFTHLMDLSPEEVAFLATGTFMERLLFFIMRWDRQFLDGILDLLMEAEE 1048 Query: 658 DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479 + S L KVRAVTRMLL+PS+SET L RR+ AT P+EALV+ HQDRL +N R Sbjct: 1049 EDFSNSHLDSGKVRAVTRMLLMPSRSETNLLRRKLATGLGHAPFEALVVPHQDRLQANTR 1108 Query: 478 LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299 L+H+ Y+FIP TRAPPIN HC++RNFAY +LEELHHPW KRL IGFARTSDY+GP+KP Sbjct: 1109 LVHATYTFIPRTRAPPINAHCSNRNFAYKLLEELHHPWLKRLFIGFARTSDYNGPKKPDV 1168 Query: 298 PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119 PHHLIQEIDS+LPVS+PA +F +S +Q K L Sbjct: 1169 PHHLIQEIDSELPVSKPA-----------LQLTYKIFGSSPPMQSFDPAKLLT------- 1210 Query: 118 LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2 DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE Sbjct: 1211 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1246 >ref|XP_002278785.1| PREDICTED: DNA helicase INO80-like [Vitis vinifera] Length = 1563 Score = 391 bits (1005), Expect = e-106 Identities = 204/339 (60%), Positives = 249/339 (73%) Frame = -1 Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839 G+Q+PITYK+PK+V++E++QSSG + S R GV R+ F K FNIFS N+++S+L QE + Sbjct: 929 GAQNPITYKVPKLVHQEVMQSSGIISSTARRGVHRETFLKHFNIFSPVNIYQSVLPQENN 988 Query: 838 SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659 S+GS +S TFGF +DLSP E+AFL +G+ MER+LF IMRWDR++LDG+LDL MEAE Sbjct: 989 SNGSAVKSGTFGFTHLMDLSPEEVAFLATGTFMERLLFFIMRWDRQFLDGILDLLMEAEE 1048 Query: 658 DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479 + S L KVRAVTRMLL+PS+SET L RR+ AT P+EALV+ HQDRL +N R Sbjct: 1049 EDFSNSHLDSGKVRAVTRMLLMPSRSETNLLRRKLATGLGHAPFEALVVPHQDRLQANTR 1108 Query: 478 LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299 L+H+ Y+FIP TRAPPIN HC++RNFAY +LEELHHPW KRL IGFARTSDY+GP+KP Sbjct: 1109 LVHATYTFIPRTRAPPINAHCSNRNFAYKLLEELHHPWLKRLFIGFARTSDYNGPKKPDV 1168 Query: 298 PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119 PHHLIQEIDS+LPVS+PA +F +S +Q K L Sbjct: 1169 PHHLIQEIDSELPVSKPA-----------LQLTYKIFGSSPPMQSFDPAKLLT------- 1210 Query: 118 LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2 DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE Sbjct: 1211 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1246 >ref|XP_002323271.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222867901|gb|EEF05032.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1540 Score = 367 bits (942), Expect = 2e-99 Identities = 201/340 (59%), Positives = 242/340 (71%), Gaps = 1/340 (0%) Frame = -1 Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839 G ++PITYKIPK+V+ E++QSS L SA+ G R+ F+K FNIFS+ENV+RS+ + S Sbjct: 934 GGRNPITYKIPKVVHNEIVQSSEVLCSAIGRGFGRESFQKHFNIFSSENVYRSVFALDNS 993 Query: 838 SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFM-EAE 662 SD +S TFGF+ +DLSPAE+AFL S MER+LF IMRW R++LDG+LDL M + E Sbjct: 994 SDSLLIKSGTFGFSHLMDLSPAEVAFLAISSFMERLLFFIMRWGRRFLDGILDLLMKDIE 1053 Query: 661 SDGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNI 482 +D S + L + KVRAVTRMLL+PS+SET + RR+ AT P D P+EALV SHQDRL SNI Sbjct: 1054 NDHS--NYLEKHKVRAVTRMLLMPSRSETDILRRKMATGPADTPFEALVNSHQDRLLSNI 1111 Query: 481 RLLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPT 302 +LLHS Y+FIP TRAPPI G C+DRNFAY ++EELH P KRLL GFARTS ++GPRKP Sbjct: 1112 KLLHSTYTFIPRTRAPPIGGQCSDRNFAYQMMEELHQPMVKRLLTGFARTSTFNGPRKPE 1171 Query: 301 GPHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHN 122 H LIQEIDS+LPVSQPA +F + +Q K L Sbjct: 1172 PLHPLIQEIDSELPVSQPA-----------LQLTYKIFGSCPPMQSFDPAKLLT------ 1214 Query: 121 MLS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2 DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE Sbjct: 1215 ----DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1250 >ref|XP_002533848.1| ATP binding protein, putative [Ricinus communis] gi|223526215|gb|EEF28539.1| ATP binding protein, putative [Ricinus communis] Length = 1339 Score = 363 bits (932), Expect = 4e-98 Identities = 192/339 (56%), Positives = 242/339 (71%) Frame = -1 Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839 G+++PITY+IPK+V++E SS L SAV HGV + F + FNIFS N+++S+ +QE + Sbjct: 864 GARNPITYQIPKLVHKET--SSEALCSAVGHGVCGERFLELFNIFSPANIYQSLFRQEDT 921 Query: 838 SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659 S+ +S TFGF +DLSP E+ FL +GS+MER+LFSI+RW+R++LDG+L+L +E Sbjct: 922 SNSLLVKSGTFGFTHLMDLSPTEVTFLATGSLMERLLFSILRWNRQFLDGILNLLVEDMD 981 Query: 658 DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479 D S + REKVR VTRMLL+PS+SET + RRR AT P + P+EALV SHQDR+ SNI+ Sbjct: 982 DDSHYNDFEREKVRVVTRMLLMPSRSETNVLRRRFATGPVETPFEALVTSHQDRILSNIK 1041 Query: 478 LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299 LLHS Y+FIP RAPPI C+DRNFAY ++EELH PW KRLL+GFARTS+++GPRKP G Sbjct: 1042 LLHSVYTFIPRARAPPIFAQCSDRNFAYKMIEELHQPWVKRLLLGFARTSEFNGPRKPDG 1101 Query: 298 PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119 PH L+QEID +LPVSQPA +F + +Q K L Sbjct: 1102 PHPLVQEIDCELPVSQPA-----------LQLTYNIFGSCPPMQSFDPAKLLT------- 1143 Query: 118 LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2 DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE Sbjct: 1144 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1179 >ref|XP_003554160.1| PREDICTED: DNA helicase INO80-like isoform 2 [Glycine max] Length = 1542 Score = 362 bits (928), Expect = 1e-97 Identities = 192/339 (56%), Positives = 238/339 (70%) Frame = -1 Query: 1018 GSQSPITYKIPKMVYRELIQSSGTLFSAVRHGVSRQLFEKRFNIFSTENVFRSMLKQEKS 839 G +PI+Y+IPK+VY+E+IQSS TL SAV VSR+ F K FNIF ENV+RS+ Sbjct: 937 GGHNPISYEIPKLVYQEIIQSSETLSSAVGPVVSRESFHKHFNIFRPENVYRSVF----- 991 Query: 838 SDGSFAESETFGFAQFIDLSPAELAFLVSGSIMERVLFSIMRWDRKYLDGMLDLFMEAES 659 S+ +++S FGF +DLSP E+ FL +GS MER+LFS+MRW++K++D +D E Sbjct: 992 SEDMYSKSGNFGFTHMMDLSPQEVTFLATGSFMERLLFSMMRWEQKFIDEAVDFLTETID 1051 Query: 658 DGSICSQLGREKVRAVTRMLLLPSKSETTLFRRRHATCPRDVPYEALVLSHQDRLSSNIR 479 D CS L +EKVRAVTRMLL+PS+SET + +++ T P P+EALV+ HQDR+ SN R Sbjct: 1052 DDPECSYLEKEKVRAVTRMLLVPSRSETLVLQKKLQTGPSHAPFEALVVPHQDRVLSNAR 1111 Query: 478 LLHSAYSFIPTTRAPPINGHCADRNFAYDVLEELHHPWFKRLLIGFARTSDYSGPRKPTG 299 LLHSAY++IP +RAPPI HC+DRNF Y ++EELH PW KRLL+GFARTSD +GPRKP Sbjct: 1112 LLHSAYTYIPQSRAPPIGAHCSDRNFCYKMIEELHDPWIKRLLVGFARTSDNNGPRKPDS 1171 Query: 298 PHHLIQEIDSKLPVSQPAXXXXXXXXXXXXXXXXXLFYNSVDLQIMCIFKSLLRLCFHNM 119 PHHLIQEIDS+LPVSQPA +F +S ++ K L Sbjct: 1172 PHHLIQEIDSELPVSQPA-----------LELTHSIFGSSPPMRNFDPAKLLT------- 1213 Query: 118 LS*DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILE 2 DSGKLQTLDILLKRLRA NHRVLLFAQMTKMLNILE Sbjct: 1214 ---DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILE 1249