BLASTX nr result

ID: Panax21_contig00007061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007061
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA52823.1| ribosomal protein S10 [Solanum tuberosum] gi|345...   150   1e-34
ref|YP_005090503.1| ribosomal protein S10 (mitochondrion) [Lotus...   145   4e-33
ref|YP_003587265.1| ribosomal protein S10 [Citrullus lanatus] gi...   144   1e-32
dbj|BAD83460.2| ribosomal protein S10 (mitochondrion) [Nicotiana...   141   9e-32
ref|YP_004222833.1| ribosomal protein S10 [Vigna radiata] gi|308...   139   3e-31

>emb|CAA52823.1| ribosomal protein S10 [Solanum tuberosum]
           gi|34525897|emb|CAE46637.1| ribosomal protein S10
           [Solanum commersonii] gi|34525901|emb|CAE46641.1|
           ribosomal protein S10 [Solanum commersonii x Solanum
           tuberosum] gi|34525905|emb|CAE46645.1| ribosomal protein
           S10 [Solanum commersonii x Solanum tuberosum]
          Length = 139

 Score =  150 bits (380), Expect = 1e-34
 Identities = 79/133 (59%), Positives = 97/133 (72%), Gaps = 2/133 (1%)
 Frame = -3

Query: 544 VRRCLTNKRPPKVMSAKICIVIRSFGR--LEEKYLRLPPITRQIALPTSRVLYTVIRSPH 371
           +RR    +RPPKV + KI IVIRSF    LE  +  LPP TR+I LP SRVLYTV+RSPH
Sbjct: 7   LRRVSQKERPPKVTTTKIGIVIRSFDHPFLENHFWGLPPYTRKIGLPESRVLYTVLRSPH 66

Query: 370 VHKSSREQFHMEIQKRFLIIETRAKELDKKYFWLKRMRLFGAQFEVQISCKTRLDKGKLE 191
           + K SREQF M+I+K FL+I+T   EL KK+F LKR R+FGAQ+E+  SCKTR DKGKL+
Sbjct: 67  IDKKSREQFFMKIKKEFLVIKTERHELRKKFFRLKRQRIFGAQYEILFSCKTRSDKGKLQ 126

Query: 190 SLLSS*MFGLTLS 152
            LL + +  LTLS
Sbjct: 127 RLLRNKILALTLS 139


>ref|YP_005090503.1| ribosomal protein S10 (mitochondrion) [Lotus japonicus]
           gi|357197367|gb|AET62963.1| ribosomal protein S10
           (mitochondrion) [Lotus japonicus]
          Length = 110

 Score =  145 bits (367), Expect = 4e-33
 Identities = 72/110 (65%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
 Frame = -3

Query: 505 MSAKICIVIRSFGR--LEEKYLRLPPITRQIALPTSRVLYTVIRSPHVHKSSREQFHMEI 332
           M+ KICIVIRSF     E  +  LPP TR+I LP SRVLYTV+RSPH+ K SREQF MEI
Sbjct: 1   MTTKICIVIRSFDHPFFENHFCGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEI 60

Query: 331 QKRFLIIETRAKELDKKYFWLKRMRLFGAQFEVQISCKTRLDKGKLESLL 182
           +K+FL+I+T   EL KK FWLKR R+FGAQ+E+  SCKTRLDKGKL+ LL
Sbjct: 61  KKQFLVIKTEKHELRKKLFWLKRQRIFGAQYEILFSCKTRLDKGKLQRLL 110


>ref|YP_003587265.1| ribosomal protein S10 [Citrullus lanatus]
           gi|259156793|gb|ACV96655.1| ribosomal protein S10
           [Citrullus lanatus]
          Length = 110

 Score =  144 bits (363), Expect = 1e-32
 Identities = 71/110 (64%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
 Frame = -3

Query: 505 MSAKICIVIRSFGR--LEEKYLRLPPITRQIALPTSRVLYTVIRSPHVHKSSREQFHMEI 332
           M+ KICIVIRSF     E  +  LPP TR+I LP SRV YTV+RSPH+ K SREQF MEI
Sbjct: 1   MTTKICIVIRSFDHPFFENHFWGLPPYTRKIGLPESRVNYTVLRSPHIDKKSREQFEMEI 60

Query: 331 QKRFLIIETRAKELDKKYFWLKRMRLFGAQFEVQISCKTRLDKGKLESLL 182
           +K+FL+I+T   EL KK+FWLKR R+FGAQ+E+  SCKTRLDKGKL+ LL
Sbjct: 61  KKQFLVIKTERHELRKKFFWLKRQRIFGAQYEILFSCKTRLDKGKLQRLL 110


>dbj|BAD83460.2| ribosomal protein S10 (mitochondrion) [Nicotiana tabacum]
          Length = 110

 Score =  141 bits (355), Expect = 9e-32
 Identities = 70/110 (63%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
 Frame = -3

Query: 505 MSAKICIVIRSFGR--LEEKYLRLPPITRQIALPTSRVLYTVIRSPHVHKSSREQFHMEI 332
           M+ KI IVIRSF     E  +  LPP TR+I LP SRVLYTV+RSPH+ K SREQF+M+I
Sbjct: 1   MTTKIGIVIRSFDHSFFENHFWGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFYMKI 60

Query: 331 QKRFLIIETRAKELDKKYFWLKRMRLFGAQFEVQISCKTRLDKGKLESLL 182
           +K FL+I+T   EL KK+FWLKR R+FGAQ+E+  SCKTRLDKGKL+ LL
Sbjct: 61  KKEFLVIKTERHELRKKFFWLKRQRIFGAQYEILFSCKTRLDKGKLQRLL 110


>ref|YP_004222833.1| ribosomal protein S10 [Vigna radiata] gi|308206766|gb|ADO19903.1|
           ribosomal protein S10 [Vigna radiata]
           gi|403311559|gb|AFR34307.1| ribosomal protein S10
           (mitochondrion) [Glycine max]
          Length = 120

 Score =  139 bits (351), Expect = 3e-31
 Identities = 75/120 (62%), Positives = 89/120 (74%), Gaps = 2/120 (1%)
 Frame = -3

Query: 505 MSAKICIVIRSFGR--LEEKYLRLPPITRQIALPTSRVLYTVIRSPHVHKSSREQFHMEI 332
           M+ KI IVIRSF    LE  +  L P TR+I LP SRVLYTV+RSPH+ K SREQF MEI
Sbjct: 1   MTTKIRIVIRSFDHPFLENHFGGLQPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEI 60

Query: 331 QKRFLIIETRAKELDKKYFWLKRMRLFGAQFEVQISCKTRLDKGKLESLLSS*MFGLTLS 152
           +K+FLII+T   EL KK+F LKR R+FGAQ+E+  SCKTR DKGKL+ LL S +  LTLS
Sbjct: 61  KKKFLIIKTEKHELRKKFFRLKRQRIFGAQYEILFSCKTRSDKGKLQRLLRSKILALTLS 120


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