BLASTX nr result

ID: Panax21_contig00007045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007045
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319948.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>ref|XP_002319948.1| predicted protein [Populus trichocarpa] gi|222858324|gb|EEE95871.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
 Frame = -3

Query: 478 MPALLYIAPSLCTMILDYLPKIDEGCGYLDMVLAVTSTAMVALYSSLLQPDIVICFQENL 299
           M ALL + P+L TM LD L KI E                                 E+L
Sbjct: 1   MAALLELCPNLETMNLDPLYKIVE--------------------------------DESL 28

Query: 298 SEDLLNQPINLSMPNLKQVKMKNYEGSENE---LQFLKLLTEQGVVLQKIVVIPTQVGEI 128
           SE+LLN+PINL MPNLK+V++K Y   +N+    QF+ LL +QGVVL+KIV++    G  
Sbjct: 29  SEELLNKPINLFMPNLKEVRLKAYVPGQNQNQFSQFVSLLKKQGVVLEKIVLVSLYNGMS 88

Query: 127 LFPPVVLTRRVQAGEI 80
           L PPV+L RR    E+
Sbjct: 89  L-PPVILRRRPPRAEV 103


Top