BLASTX nr result
ID: Panax21_contig00007038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00007038
(2085 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast... 816 0.0
emb|CBI29133.3| unnamed protein product [Vitis vinifera] 816 0.0
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor... 795 0.0
ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|2... 794 0.0
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast... 787 0.0
>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Vitis vinifera]
Length = 925
Score = 816 bits (2108), Expect = 0.0
Identities = 428/545 (78%), Positives = 470/545 (86%)
Frame = -3
Query: 1864 IELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVER 1685
IELKRGSDPSIVLN LYRLTALQSSFSCNM+GIL+GQPK MGLKELLQAFLDFRCSVVER
Sbjct: 379 IELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVER 438
Query: 1684 RARFKLSQAQDRSHILEGIVVGLDNLDAVIDIIRKASSNSMASTNLRKEFTLSEKQADAI 1505
RARFKLSQAQ+R HI+EGIVVGLDNLDAVI +I++A SN+MAST LR EF LSE+QA+AI
Sbjct: 439 RARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAI 498
Query: 1504 LDINLRRLTLLERNKFVNEGKSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXKNKFDTPRR 1325
LDI+LRR+T LER KFV E KSLM KN+F TPRR
Sbjct: 499 LDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRR 558
Query: 1324 STLEDTDSGLLEEIDIIPNEEMLLALSEKGYVKRMKPDTFNLQTRGTIGKSVGKLRVNDT 1145
S LEDTDSG LE++D+IPNEEMLLA+SEKGYVKRMKP+TFNLQ RGTIGKSVGKLRVND
Sbjct: 559 SMLEDTDSGQLEDVDVIPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDA 618
Query: 1144 MSDFRVCHAHDHVLYFSDQGIVYSARAYKIPECTRAAAGTPLVQILSLSGGERITSIIPV 965
MSDF VCHAHD+VLYFSD+GIV+SARAYKIPECTR AAGTPLVQIL LS GERITSIIPV
Sbjct: 619 MSDFIVCHAHDYVLYFSDRGIVHSARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPV 678
Query: 964 SEFAEDQYLLMLTANGYIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVCLCTNDDLVAMA 785
SEFAEDQ+LLMLT NGYIKKVSL++FSSIRSTGIIAIQLVPGDELKWV CTNDDLVAMA
Sbjct: 679 SEFAEDQFLLMLTMNGYIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMA 738
Query: 784 SQKGMVILSSCEAIRALSRNTRGSVAMRLKREDRMASMDIIPAAMRKDLERNSEANHSHG 605
SQ GMVILSSCE IRAL RNTRGS+AMRLK+ D+MASMDIIPAA+RKDLE+ E S
Sbjct: 739 SQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRA 798
Query: 604 KGVSGPLLLFISESGYGKRVPLSSFRMSPLNRVGLKGLKFSSEDRLAAVFVVGFSLAEDG 425
+ ++GP LLF+SESG GKRVPLS FR+SPLNRVGL G KFS+ED LAAVFVVGFSL EDG
Sbjct: 799 RNLNGPWLLFVSESGLGKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDG 858
Query: 424 ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSTSLISATEPELEEV 245
ESDEQVVLVSQSGT+NRIKV DISIQSR+ARGVILMRLE+AGKIQS SL+SATE E ++
Sbjct: 859 ESDEQVVLVSQSGTINRIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDE 918
Query: 244 EAVAI 230
EAVA+
Sbjct: 919 EAVAV 923
>emb|CBI29133.3| unnamed protein product [Vitis vinifera]
Length = 823
Score = 816 bits (2108), Expect = 0.0
Identities = 428/545 (78%), Positives = 470/545 (86%)
Frame = -3
Query: 1864 IELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVER 1685
IELKRGSDPSIVLN LYRLTALQSSFSCNM+GIL+GQPK MGLKELLQAFLDFRCSVVER
Sbjct: 277 IELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLMGLKELLQAFLDFRCSVVER 336
Query: 1684 RARFKLSQAQDRSHILEGIVVGLDNLDAVIDIIRKASSNSMASTNLRKEFTLSEKQADAI 1505
RARFKLSQAQ+R HI+EGIVVGLDNLDAVI +I++A SN+MAST LR EF LSE+QA+AI
Sbjct: 337 RARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAMASTGLRNEFGLSERQAEAI 396
Query: 1504 LDINLRRLTLLERNKFVNEGKSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXKNKFDTPRR 1325
LDI+LRR+T LER KFV E KSLM KN+F TPRR
Sbjct: 397 LDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQILQLIEQEAIELKNRFSTPRR 456
Query: 1324 STLEDTDSGLLEEIDIIPNEEMLLALSEKGYVKRMKPDTFNLQTRGTIGKSVGKLRVNDT 1145
S LEDTDSG LE++D+IPNEEMLLA+SEKGYVKRMKP+TFNLQ RGTIGKSVGKLRVND
Sbjct: 457 SMLEDTDSGQLEDVDVIPNEEMLLAVSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDA 516
Query: 1144 MSDFRVCHAHDHVLYFSDQGIVYSARAYKIPECTRAAAGTPLVQILSLSGGERITSIIPV 965
MSDF VCHAHD+VLYFSD+GIV+SARAYKIPECTR AAGTPLVQIL LS GERITSIIPV
Sbjct: 517 MSDFIVCHAHDYVLYFSDRGIVHSARAYKIPECTRTAAGTPLVQILCLSDGERITSIIPV 576
Query: 964 SEFAEDQYLLMLTANGYIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVCLCTNDDLVAMA 785
SEFAEDQ+LLMLT NGYIKKVSL++FSSIRSTGIIAIQLVPGDELKWV CTNDDLVAMA
Sbjct: 577 SEFAEDQFLLMLTMNGYIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMA 636
Query: 784 SQKGMVILSSCEAIRALSRNTRGSVAMRLKREDRMASMDIIPAAMRKDLERNSEANHSHG 605
SQ GMVILSSCE IRAL RNTRGS+AMRLK+ D+MASMDIIPAA+RKDLE+ E S
Sbjct: 637 SQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRA 696
Query: 604 KGVSGPLLLFISESGYGKRVPLSSFRMSPLNRVGLKGLKFSSEDRLAAVFVVGFSLAEDG 425
+ ++GP LLF+SESG GKRVPLS FR+SPLNRVGL G KFS+ED LAAVFVVGFSL EDG
Sbjct: 697 RNLNGPWLLFVSESGLGKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDG 756
Query: 424 ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSTSLISATEPELEEV 245
ESDEQVVLVSQSGT+NRIKV DISIQSR+ARGVILMRLE+AGKIQS SL+SATE E ++
Sbjct: 757 ESDEQVVLVSQSGTINRIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDE 816
Query: 244 EAVAI 230
EAVA+
Sbjct: 817 EAVAV 821
>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
subunit [Nicotiana benthamiana]
Length = 935
Score = 795 bits (2052), Expect = 0.0
Identities = 419/545 (76%), Positives = 459/545 (84%)
Frame = -3
Query: 1864 IELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVER 1685
IELKRGSDP+IVLNNLYRLTALQSSFSCNMVGILNGQPK MGLKELLQAFLDFRCSVVER
Sbjct: 389 IELKRGSDPAIVLNNLYRLTALQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVER 448
Query: 1684 RARFKLSQAQDRSHILEGIVVGLDNLDAVIDIIRKASSNSMASTNLRKEFTLSEKQADAI 1505
RARFKLSQAQ+R+HI+EGI+VGLDNLD VI+ IRKASSN++A+ +LRKEF LSEKQA+AI
Sbjct: 449 RARFKLSQAQERNHIVEGIIVGLDNLDEVINTIRKASSNALAAASLRKEFELSEKQAEAI 508
Query: 1504 LDINLRRLTLLERNKFVNEGKSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXKNKFDTPRR 1325
LDI+LRRLT LERNKFV EGKSL KNKF PRR
Sbjct: 509 LDISLRRLTALERNKFVEEGKSLRTQISKLEELLSSKKQILQLIEEEAIEIKNKFFNPRR 568
Query: 1324 STLEDTDSGLLEEIDIIPNEEMLLALSEKGYVKRMKPDTFNLQTRGTIGKSVGKLRVNDT 1145
S LEDTDSG LE+ID+IPNEEMLLA+SEKGYVKRMKPDTFNLQ RGTIGKSVGKLRVND
Sbjct: 569 SMLEDTDSGDLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDA 628
Query: 1144 MSDFRVCHAHDHVLYFSDQGIVYSARAYKIPECTRAAAGTPLVQILSLSGGERITSIIPV 965
MSDF VC AHD VLYFSD+G VYS+ AYKIPEC+R AAGTPLVQILSLS GERITSIIPV
Sbjct: 629 MSDFLVCRAHDKVLYFSDKGTVYSSPAYKIPECSRTAAGTPLVQILSLSDGERITSIIPV 688
Query: 964 SEFAEDQYLLMLTANGYIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVCLCTNDDLVAMA 785
SEFA DQYL+MLT NGYIKKVSL+YF+SIR TGIIAIQLVP DELKWV C+N+D VAMA
Sbjct: 689 SEFAADQYLVMLTVNGYIKKVSLNYFASIRCTGIIAIQLVPDDELKWVKCCSNNDFVAMA 748
Query: 784 SQKGMVILSSCEAIRALSRNTRGSVAMRLKREDRMASMDIIPAAMRKDLERNSEANHSHG 605
SQ GMVIL+ C IRAL RNTRGSVAMRLK D++ASMDIIP A++K+L++ E
Sbjct: 749 SQNGMVILTPCANIRALGRNTRGSVAMRLKEGDKVASMDIIPDALQKELDKTLEVQQRQY 808
Query: 604 KGVSGPLLLFISESGYGKRVPLSSFRMSPLNRVGLKGLKFSSEDRLAAVFVVGFSLAEDG 425
+ + GP LLF+SESGYGKRVP+S FR SPLNRVGL G KFSSED LAAVFVVGFSL EDG
Sbjct: 809 RSMKGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLFGYKFSSEDCLAAVFVVGFSLGEDG 868
Query: 424 ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSTSLISATEPELEEV 245
ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQS SLISA + + E+
Sbjct: 869 ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSASLISAADADPEDE 928
Query: 244 EAVAI 230
+A A+
Sbjct: 929 DATAV 933
>ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|222864442|gb|EEF01573.1|
predicted protein [Populus trichocarpa]
Length = 932
Score = 794 bits (2051), Expect = 0.0
Identities = 420/543 (77%), Positives = 461/543 (84%)
Frame = -3
Query: 1864 IELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVER 1685
IELKRG+DPSIVLNNLYRLT LQSSFSCNMVGIL+GQPKQMGLKELLQAFLDFRCSVVER
Sbjct: 382 IELKRGADPSIVLNNLYRLTPLQSSFSCNMVGILDGQPKQMGLKELLQAFLDFRCSVVER 441
Query: 1684 RARFKLSQAQDRSHILEGIVVGLDNLDAVIDIIRKASSNSMASTNLRKEFTLSEKQADAI 1505
RA FKLS+AQ R HI+EG++ GLDNLD V+DIIRKASSN++AS +LR EF+LSEKQA+AI
Sbjct: 442 RAMFKLSEAQKRRHIVEGVMAGLDNLDRVVDIIRKASSNAIASADLRNEFSLSEKQAEAI 501
Query: 1504 LDINLRRLTLLERNKFVNEGKSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXKNKFDTPRR 1325
LDI+LRRLTLLE KFV E KSLM KNKF PRR
Sbjct: 502 LDISLRRLTLLEGKKFVEESKSLMEQITKLEELLSSRGNILQLIEQEAVELKNKFSNPRR 561
Query: 1324 STLEDTDSGLLEEIDIIPNEEMLLALSEKGYVKRMKPDTFNLQTRGTIGKSVGKLRVNDT 1145
S LED+DSG LE+ID+IPNEEMLLA+SEKGYVKRMKP+TFNLQ RGTIGKSVGKLR +D
Sbjct: 562 SMLEDSDSGQLEDIDVIPNEEMLLAISEKGYVKRMKPNTFNLQNRGTIGKSVGKLRDSDA 621
Query: 1144 MSDFRVCHAHDHVLYFSDQGIVYSARAYKIPECTRAAAGTPLVQILSLSGGERITSIIPV 965
MSDF VCHAHD VLYFSDQGIVYSA AYKIPECTRAAAGTPL+Q LSLS GERITSIIPV
Sbjct: 622 MSDFIVCHAHDRVLYFSDQGIVYSAPAYKIPECTRAAAGTPLIQFLSLSDGERITSIIPV 681
Query: 964 SEFAEDQYLLMLTANGYIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVCLCTNDDLVAMA 785
SEF EDQ+LLMLT NGYIKKVSL+ FS+IRSTGIIAIQLVPGDELKWV CTN DLVAMA
Sbjct: 682 SEFVEDQFLLMLTVNGYIKKVSLNSFSAIRSTGIIAIQLVPGDELKWVRCCTNGDLVAMA 741
Query: 784 SQKGMVILSSCEAIRALSRNTRGSVAMRLKREDRMASMDIIPAAMRKDLERNSEANHSHG 605
SQ GMVIL+SCE IRAL RNTRG VAMRL+ D++ASMDIIPA+++KDLE S+ + ++
Sbjct: 742 SQNGMVILTSCENIRALGRNTRGGVAMRLREGDKIASMDIIPASLQKDLEVASKDSENNN 801
Query: 604 KGVSGPLLLFISESGYGKRVPLSSFRMSPLNRVGLKGLKFSSEDRLAAVFVVGFSLAEDG 425
KG +GP LLF+SESG+GKRVPLSSF+ S LNRVGL G KF ED LAAVF VGFSL EDG
Sbjct: 802 KG-TGPWLLFVSESGHGKRVPLSSFKQSRLNRVGLIGYKFFEEDHLAAVFAVGFSLTEDG 860
Query: 424 ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSTSLISATEPELEEV 245
ESDEQVVLVSQSGTVNRIKVRDISIQSR+ARGVILMRLEHAGKIQSTSLISA +PELEE+
Sbjct: 861 ESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRLEHAGKIQSTSLISAADPELEEL 920
Query: 244 EAV 236
V
Sbjct: 921 APV 923
>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 923
Score = 787 bits (2032), Expect = 0.0
Identities = 419/542 (77%), Positives = 457/542 (84%)
Frame = -3
Query: 1864 IELKRGSDPSIVLNNLYRLTALQSSFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVER 1685
IELKRG+DPSIV NNLYRLT+LQSSFSCNMVGI+NGQPK MGLKELLQAFLDFRCSVVER
Sbjct: 388 IELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIINGQPKLMGLKELLQAFLDFRCSVVER 447
Query: 1684 RARFKLSQAQDRSHILEGIVVGLDNLDAVIDIIRKASSNSMASTNLRKEFTLSEKQADAI 1505
RARFKL AQ+R HI+EGIV+GLDNLD VI +IR+ASS+S+AS +LR +F LSEKQA+A+
Sbjct: 448 RARFKLLHAQERRHIVEGIVIGLDNLDGVIRLIREASSHSIASASLRTQFNLSEKQAEAV 507
Query: 1504 LDINLRRLTLLERNKFVNEGKSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXKNKFDTPRR 1325
LDINLRRLT LER KF++E KSLM K+KF PRR
Sbjct: 508 LDINLRRLTHLERKKFIDESKSLMENISKLEELLSSRNNILQLIEQEATELKDKFPNPRR 567
Query: 1324 STLEDTDSGLLEEIDIIPNEEMLLALSEKGYVKRMKPDTFNLQTRGTIGKSVGKLRVNDT 1145
S LEDTDSG +E+ID+IPNEEMLLA SEKGYVKRMKP+TFNLQ RGTIGKSVGKLRVND
Sbjct: 568 SVLEDTDSGQVEDIDVIPNEEMLLAFSEKGYVKRMKPNTFNLQHRGTIGKSVGKLRVNDA 627
Query: 1144 MSDFRVCHAHDHVLYFSDQGIVYSARAYKIPECTRAAAGTPLVQILSLSGGERITSIIPV 965
MSDF VC AHDHVLYFSD+GIVYSARAYKIPEC R AAGTPLVQ+LSLS GERITSIIPV
Sbjct: 628 MSDFIVCRAHDHVLYFSDKGIVYSARAYKIPECGRTAAGTPLVQVLSLSDGERITSIIPV 687
Query: 964 SEFAEDQYLLMLTANGYIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVCLCTNDDLVAMA 785
SEF DQ+LLMLTA GYIKKVSL++FSSIRSTGIIAIQLV GDELKWV CTND+LVAMA
Sbjct: 688 SEFEGDQFLLMLTAYGYIKKVSLNFFSSIRSTGIIAIQLVSGDELKWVRRCTNDNLVAMA 747
Query: 784 SQKGMVILSSCEAIRALSRNTRGSVAMRLKREDRMASMDIIPAAMRKDLERNSEANHSHG 605
SQ GMVILSSC+ IRAL RNTRGSVAM+LK D+MASMDIIPAA+ DLERNS
Sbjct: 748 SQNGMVILSSCDTIRALGRNTRGSVAMKLKTGDKMASMDIIPAAVWNDLERNS------S 801
Query: 604 KGVSGPLLLFISESGYGKRVPLSSFRMSPLNRVGLKGLKFSSEDRLAAVFVVGFSLAEDG 425
K +GP LLF+SESG GKRVPL SFR+SPL RVGL G KFSS+DRLAAVFVVGFSLAEDG
Sbjct: 802 KSSNGPWLLFVSESGVGKRVPLKSFRLSPLRRVGLIGCKFSSQDRLAAVFVVGFSLAEDG 861
Query: 424 ESDEQVVLVSQSGTVNRIKVRDISIQSRYARGVILMRLEHAGKIQSTSLISATEPELEEV 245
ESDEQVVLVSQSGTVNRIKVRD+SIQSR+ARGVILMRL+HAGKIQS SLISA E E EE
Sbjct: 862 ESDEQVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHAGKIQSASLISAAETEPEEE 921
Query: 244 EA 239
EA
Sbjct: 922 EA 923