BLASTX nr result

ID: Panax21_contig00007030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007030
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent R...   230   8e-59
emb|CBI19932.3| unnamed protein product [Vitis vinifera]              230   8e-59
ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putativ...   225   3e-57
ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent R...   221   6e-56

>ref|XP_002279081.2| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
            [Vitis vinifera]
          Length = 784

 Score =  230 bits (587), Expect = 8e-59
 Identities = 118/172 (68%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
 Frame = -3

Query: 518  VPTNQHFEAGLSVRGNQGFESNRXXXXXXXXXXXDSGGLQKQKTTYHWDKRSKKFIKLNN 339
            VPTN+H EAGLSVR N+GF S+R           DS GLQKQK+ YHWDKR KK+IKLNN
Sbjct: 600  VPTNRHAEAGLSVRANEGFGSSRLEAAVLDLVADDSSGLQKQKSVYHWDKRGKKYIKLNN 659

Query: 338  GDRVTASGKIKTESGAKVKANKTGIYKRWKERSHNKISFRGT-NEGSAEEATNTAGSRGL 162
            G+RVTASGKIKTESG+KVKA KTGIYK+WKERSHNKIS +GT NEG+A EAT++AG+  L
Sbjct: 660  GERVTASGKIKTESGSKVKATKTGIYKKWKERSHNKISLKGTSNEGNA-EATSSAGNHQL 718

Query: 161  RMDNRRFKGGKQHHSIPNAHVRSEIKDNEQVRKERQKKATRISQMKNNPKKG 6
               N + +G K H S+PNAHVRSEIKD+EQVRK+RQKKA RIS MK+ P KG
Sbjct: 719  HGGNWKLRGRKNHRSMPNAHVRSEIKDSEQVRKDRQKKANRISHMKSKPMKG 770


>emb|CBI19932.3| unnamed protein product [Vitis vinifera]
          Length = 786

 Score =  230 bits (587), Expect = 8e-59
 Identities = 118/172 (68%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
 Frame = -3

Query: 518  VPTNQHFEAGLSVRGNQGFESNRXXXXXXXXXXXDSGGLQKQKTTYHWDKRSKKFIKLNN 339
            VPTN+H EAGLSVR N+GF S+R           DS GLQKQK+ YHWDKR KK+IKLNN
Sbjct: 602  VPTNRHAEAGLSVRANEGFGSSRLEAAVLDLVADDSSGLQKQKSVYHWDKRGKKYIKLNN 661

Query: 338  GDRVTASGKIKTESGAKVKANKTGIYKRWKERSHNKISFRGT-NEGSAEEATNTAGSRGL 162
            G+RVTASGKIKTESG+KVKA KTGIYK+WKERSHNKIS +GT NEG+A EAT++AG+  L
Sbjct: 662  GERVTASGKIKTESGSKVKATKTGIYKKWKERSHNKISLKGTSNEGNA-EATSSAGNHQL 720

Query: 161  RMDNRRFKGGKQHHSIPNAHVRSEIKDNEQVRKERQKKATRISQMKNNPKKG 6
               N + +G K H S+PNAHVRSEIKD+EQVRK+RQKKA RIS MK+ P KG
Sbjct: 721  HGGNWKLRGRKNHRSMPNAHVRSEIKDSEQVRKDRQKKANRISHMKSKPMKG 772


>ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 789

 Score =  225 bits (574), Expect = 3e-57
 Identities = 112/173 (64%), Positives = 136/173 (78%), Gaps = 1/173 (0%)
 Frame = -3

Query: 518  VPTNQHFEAGLSVRGNQGFESNRXXXXXXXXXXXDSGGLQKQKTTYHWDKRSKKFIKLNN 339
            VPTN H EAGLSVR N+GF SNR           DSGG+QKQKT YHWDKR KK+IKLNN
Sbjct: 603  VPTNHHTEAGLSVRANEGFGSNRLEAAVLDLVADDSGGMQKQKTVYHWDKRGKKYIKLNN 662

Query: 338  GDRVTASGKIKTESGAKVKANKTGIYKRWKERSHNKISFRG-TNEGSAEEATNTAGSRGL 162
            G+RVTASGK+KTE GAKVKANKTGIYK+WKERSH K+S +G ++EG+AE+ +  +G   L
Sbjct: 663  GERVTASGKVKTEGGAKVKANKTGIYKKWKERSHRKVSLKGASDEGNAEQTSTFSGDNRL 722

Query: 161  RMDNRRFKGGKQHHSIPNAHVRSEIKDNEQVRKERQKKATRISQMKNNPKKGK 3
            R +NR+FKGGK+ + +PNA+VRSEIK  EQVRKERQKKA+++S MK+    GK
Sbjct: 723  RGNNRKFKGGKKQNFMPNANVRSEIKSLEQVRKERQKKASQMSHMKSKGAGGK 775


>ref|XP_002307469.1| predicted protein [Populus trichocarpa] gi|222856918|gb|EEE94465.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  223 bits (568), Expect = 1e-56
 Identities = 113/161 (70%), Positives = 130/161 (80%), Gaps = 1/161 (0%)
 Frame = -3

Query: 482 VRGNQGFESNRXXXXXXXXXXXDSGGLQKQKTTYHWDKRSKKFIKLNNGDRVTASGKIKT 303
           +RGN GF SNR           DSGGLQKQKT YHWDKR+KK+IKLNNGDRVTASGKIKT
Sbjct: 1   MRGNDGFGSNRLENAVLDLVADDSGGLQKQKTVYHWDKRNKKYIKLNNGDRVTASGKIKT 60

Query: 302 ESGAKVKANKTGIYKRWKERSHNKISFRGT-NEGSAEEATNTAGSRGLRMDNRRFKGGKQ 126
           ESGAKVKA KTGIYK+WKE SH KIS RGT N+G+AEE+T+ +G+R LR +NR F+G K+
Sbjct: 61  ESGAKVKATKTGIYKKWKEGSHRKISLRGTNNDGNAEESTSFSGNRQLRGNNRNFRGSKK 120

Query: 125 HHSIPNAHVRSEIKDNEQVRKERQKKATRISQMKNNPKKGK 3
            HS+PNA+VRSEIKD EQVRKERQKKA R+S MK+   KGK
Sbjct: 121 QHSLPNANVRSEIKDLEQVRKERQKKADRVSYMKSKGSKGK 161


>ref|XP_004164052.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
            [Cucumis sativus]
          Length = 789

 Score =  221 bits (562), Expect = 6e-56
 Identities = 108/173 (62%), Positives = 130/173 (75%), Gaps = 1/173 (0%)
 Frame = -3

Query: 518  VPTNQHFEAGLSVRGNQGFESNRXXXXXXXXXXXDSGGLQKQKTTYHWDKRSKKFIKLNN 339
            VPTN H EAGL+V+G+QGF SNR           DS G+QK K+ YHWDKRSKK++KLNN
Sbjct: 605  VPTNHHTEAGLTVKGDQGFGSNRLDNAVLDLVADDSSGMQKNKSVYHWDKRSKKYVKLNN 664

Query: 338  GDRVTASGKIKTESGAKVKANKTGIYKRWKERSHNKISFRGTNEGSAEEATNTAGSRGLR 159
            GDRVTASGKIKTESGAKVKANKTGIYK+WKERSHNKIS +G + G  +      G++   
Sbjct: 665  GDRVTASGKIKTESGAKVKANKTGIYKKWKERSHNKISLKGISNGEHDGDAINTGNQRFS 724

Query: 158  MDNRRFKGGKQHHSIPNAHVRSEIKDNEQVRKERQKKATRISQMKNN-PKKGK 3
             + RRF  GK  HS+PNAHVR E+K+ +Q+RKERQKKA ++  MKNN PK+GK
Sbjct: 725  GNKRRFGQGKNKHSVPNAHVRPEVKNLDQIRKERQKKADKVQHMKNNRPKRGK 777


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