BLASTX nr result

ID: Panax21_contig00007026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007026
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   104   2e-20
ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   104   2e-20
gb|ACU19018.1| unknown [Glycine max]                                  104   2e-20
ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A...   104   2e-20
gb|ABA94392.2| RING-H2 finger protein RHF2a, putative, expressed...   102   7e-20

>ref|XP_003540274.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 401

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 612 QRSSQCTMCWQPISLKDPNSQELLDAIERERSIRTNPSRNTAIFHHPTLGDFELKH 779
           QRSSQC MCWQPISLKDP SQELL+A+ERER+ R NPSRN  IFHHPTLGDFEL+H
Sbjct: 76  QRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQH 131


>ref|XP_003543397.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Glycine max]
          Length = 398

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 612 QRSSQCTMCWQPISLKDPNSQELLDAIERERSIRTNPSRNTAIFHHPTLGDFELKH 779
           QRSSQC MCWQPISLKDP SQELL+A+ERER+ R NPSRN  IFHHPTLGDFEL+H
Sbjct: 73  QRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQH 128


>gb|ACU19018.1| unknown [Glycine max]
          Length = 401

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 612 QRSSQCTMCWQPISLKDPNSQELLDAIERERSIRTNPSRNTAIFHHPTLGDFELKH 779
           QRSSQC MCWQPISLKDP SQELL+A+ERER+ R NPSRN  IFHHPTLGDFEL+H
Sbjct: 76  QRSSQCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQH 131


>ref|XP_002277399.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A [Vitis vinifera]
           gi|296084011|emb|CBI24399.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  104 bits (259), Expect = 2e-20
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 612 QRSSQCTMCWQPISLKDPNSQELLDAIERERSIRTNPSRNTAIFHHPTLGDFELKH 779
           QRSSQC MCWQPISLKDP SQELL+A+ERER+ R NPSRN  IFHHPTLGDFEL+H
Sbjct: 67  QRSSQCPMCWQPISLKDPTSQELLEAVERERTFRFNPSRNATIFHHPTLGDFELQH 122


>gb|ABA94392.2| RING-H2 finger protein RHF2a, putative, expressed [Oryza sativa
           Japonica Group] gi|222616175|gb|EEE52307.1| hypothetical
           protein OsJ_34320 [Oryza sativa Japonica Group]
          Length = 394

 Score =  102 bits (255), Expect = 7e-20
 Identities = 44/56 (78%), Positives = 51/56 (91%)
 Frame = +3

Query: 612 QRSSQCTMCWQPISLKDPNSQELLDAIERERSIRTNPSRNTAIFHHPTLGDFELKH 779
           QRSSQC MCWQPISLKDP SQELL+A+ERER++RTN +RNT IFHHP LGDFE++H
Sbjct: 65  QRSSQCPMCWQPISLKDPTSQELLEAVERERNVRTNQTRNTTIFHHPALGDFEVQH 120


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