BLASTX nr result

ID: Panax21_contig00007009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00007009
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation...   198   4e-49
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation...   191   5e-47
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...   191   5e-47
gb|ABK95926.1| unknown [Populus trichocarpa]                          186   1e-45
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c...   184   5e-45

>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
           [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
           protein product [Vitis vinifera]
          Length = 410

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/116 (85%), Positives = 107/116 (92%)
 Frame = -3

Query: 350 EDPALSVVRFTAEISWADAGPEVAEPQVSRLGLEAQECMIASRWLDLASLMLTSADLIFS 171
           EDPALSVVR+TAEISWADAGPEVAEPQV+RL +EAQECM+  RWLDLASLMLTSADL+FS
Sbjct: 10  EDPALSVVRYTAEISWADAGPEVAEPQVTRLCMEAQECMVRGRWLDLASLMLTSADLMFS 69

Query: 170 KASEKDLECIFTVICNLVKKSGSPDEALEMAKLISTKVTQQPIDKPALRLKIMFNL 3
           KAS+KDLECIFTVICNLV KS SPDEALEMAK IS K+TQQP DK ALRLKI+FNL
Sbjct: 70  KASDKDLECIFTVICNLVTKSESPDEALEMAKFISAKITQQPNDKAALRLKILFNL 125


>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           M-like [Cucumis sativus]
          Length = 410

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -3

Query: 350 EDPALSVVRFTAEISWADAGPEVAEPQVSRLGLEAQECMIASRWLDLASLMLTSADLIFS 171
           ED AL+VVRF +E++WADAGPE AEPQV+RL +EAQECM+  RWLDLASLMLTSADLIFS
Sbjct: 10  EDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLMLTSADLIFS 69

Query: 170 KASEKDLECIFTVICNLVKKSGSPDEALEMAKLISTKVTQQPIDKPALRLKIMFNL 3
           K SEKDLEC+FT+ICNLV K+GSPDE+LEMAKLIS K+ QQP DKPALRLKI+FNL
Sbjct: 70  KVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLKILFNL 125


>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit M-like [Cucumis sativus]
          Length = 417

 Score =  191 bits (485), Expect = 5e-47
 Identities = 92/116 (79%), Positives = 105/116 (90%)
 Frame = -3

Query: 350 EDPALSVVRFTAEISWADAGPEVAEPQVSRLGLEAQECMIASRWLDLASLMLTSADLIFS 171
           ED AL+VVRF +E++WADAGPE AEPQV+RL +EAQECM+  RWLDLASLMLTSADLIFS
Sbjct: 10  EDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLMLTSADLIFS 69

Query: 170 KASEKDLECIFTVICNLVKKSGSPDEALEMAKLISTKVTQQPIDKPALRLKIMFNL 3
           K SEKDLEC+FT+ICNLV K+GSPDE+LEMAKLIS K+ QQP DKPALRLKI+FNL
Sbjct: 70  KVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLKILFNL 125


>gb|ABK95926.1| unknown [Populus trichocarpa]
          Length = 412

 Score =  186 bits (473), Expect = 1e-45
 Identities = 94/118 (79%), Positives = 104/118 (88%), Gaps = 2/118 (1%)
 Frame = -3

Query: 350 EDPALSVVRFTAEISWADAGPEVAEPQVSRLGLEAQECMIASRWLDLASLMLTSADLIF- 174
           EDPALSVVRFT+E+SW+DAGPEVAE QVSRL +EAQECM+ +RWLDL SLMLTSAD++F 
Sbjct: 10  EDPALSVVRFTSELSWSDAGPEVAEQQVSRLCVEAQECMVRNRWLDLTSLMLTSADIVFS 69

Query: 173 -SKASEKDLECIFTVICNLVKKSGSPDEALEMAKLISTKVTQQPIDKPALRLKIMFNL 3
            SK SEKDLECIFTVICNLV KS SPDE LEMAKLI TK+ QQP DKP LRLKI+FNL
Sbjct: 70  NSKVSEKDLECIFTVICNLVTKSESPDEELEMAKLICTKIIQQPSDKPVLRLKILFNL 127


>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
           gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
           putative [Ricinus communis]
          Length = 412

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/118 (79%), Positives = 104/118 (88%), Gaps = 2/118 (1%)
 Frame = -3

Query: 350 EDPALSVVRFTAEISWADAGPEVAEPQVSRLGLEAQECMIASRWLDLASLMLTSADLIF- 174
           EDPAL+VVRFT+E++WADAGPEVAE QVSRL +EAQECM+  RWLDLASL+LTSAD+IF 
Sbjct: 10  EDPALAVVRFTSELAWADAGPEVAEQQVSRLCVEAQECMVIGRWLDLASLILTSADVIFS 69

Query: 173 -SKASEKDLECIFTVICNLVKKSGSPDEALEMAKLISTKVTQQPIDKPALRLKIMFNL 3
            SK SEKDLECIFTVICNLV K  SPDEALEMAKLI  K+ QQP DKPALRLKI+FNL
Sbjct: 70  NSKVSEKDLECIFTVICNLVTKPDSPDEALEMAKLICGKIIQQPADKPALRLKILFNL 127


Top