BLASTX nr result
ID: Panax21_contig00006486
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00006486
(735 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309474.1| predicted protein [Populus trichocarpa] gi|2... 100 5e-19
ref|XP_003523652.1| PREDICTED: uncharacterized protein At5g12080... 97 3e-18
ref|XP_003603202.1| Fgenesh protein [Medicago truncatula] gi|355... 92 8e-17
ref|XP_003526048.1| PREDICTED: uncharacterized protein At5g12080... 91 2e-16
emb|CAN70429.1| hypothetical protein VITISV_037531 [Vitis vinifera] 88 2e-15
>ref|XP_002309474.1| predicted protein [Populus trichocarpa] gi|222855450|gb|EEE92997.1|
predicted protein [Populus trichocarpa]
Length = 622
Score = 99.8 bits (247), Expect = 5e-19
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 6 RPPKIPT-NETLTRRKSLARSVYSKPKSRFGEQPVPVDSNIFEESSSLMQDYINSSGNSP 182
+PPKIPT NE LTRR+SL RSVYSKPKSRFGEQP +DS + EE+ S +Q+ I ++ SP
Sbjct: 21 KPPKIPTPNENLTRRRSLVRSVYSKPKSRFGEQPYGIDSTLLEENVSTLQEQIATA--SP 78
Query: 183 MKNMXXXXXXXXXXXXXXXXFKETVRSVSITTPRTPLMASPXXXXXXXXXXXIYKKVSIR 362
+N+ + S+ TP+TPLMASP ++K+V
Sbjct: 79 HRNLLTRGS------------PNNKSASSVITPKTPLMASPGGPADEEDEEEVWKRVESS 126
Query: 363 NKLKYKRVKIKALIEW 410
+ + +RV KA+IEW
Sbjct: 127 KQKQRRRVGAKAVIEW 142
Score = 75.5 bits (184), Expect = 1e-11
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = +2
Query: 584 WFMHFVVLLIELNFLLRKKVLYFVHSLKKSAQVCLWLTLVLITWLSLFS 730
WFMH +V LIE NFLL+KKVLYFVH LKKS QV +W+ L+L+ W LF+
Sbjct: 190 WFMHVIVFLIERNFLLKKKVLYFVHGLKKSVQVFIWIALILLAWAFLFN 238
>ref|XP_003523652.1| PREDICTED: uncharacterized protein At5g12080-like [Glycine max]
Length = 845
Score = 97.1 bits (240), Expect = 3e-18
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = +3
Query: 3 NRPPKIPT-NETLTRRKSLARSVYSKPKSRFGEQPVPVDSNIFEE-SSSLMQDYINSSGN 176
N+PPK+PT N LTRRKSL RSVYSKPKSRFGEQ P+D + EE ++S +Q+ N +
Sbjct: 150 NKPPKVPTSNAILTRRKSLTRSVYSKPKSRFGEQSYPIDGTLLEENATSTLQE--NLTVG 207
Query: 177 SPMKNMXXXXXXXXXXXXXXXXFKETVRSVSITTPRTPLMASPXXXXXXXXXXXIYKKVS 356
SP K T +S+ TP+TPLMASP IYKKV
Sbjct: 208 SPYK-------ASPNNNNKPGTVNRTFSILSVVTPKTPLMASP-GLAGEDFDEIIYKKVE 259
Query: 357 IRNKLKYKRVKIKALIEW 410
+ ++ +R+ +K L EW
Sbjct: 260 LSKNMRSRRLTVKVLFEW 277
Score = 70.5 bits (171), Expect = 3e-10
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = +2
Query: 584 WFMHFVVLLIELNFLLRKKVLYFVHSLKKSAQVCLWLTLVLITWLSLFS 730
WFM VV LIE NFLLRKKVLYFVH LKK Q +WL LVL+TW+ L +
Sbjct: 325 WFMLIVVFLIETNFLLRKKVLYFVHGLKKCVQFFIWLGLVLLTWVLLIN 373
>ref|XP_003603202.1| Fgenesh protein [Medicago truncatula] gi|355492250|gb|AES73453.1|
Fgenesh protein [Medicago truncatula]
Length = 754
Score = 92.4 bits (228), Expect = 8e-17
Identities = 64/138 (46%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
Frame = +3
Query: 3 NRPPKIP-TNETLTRRKSLARSVYSKPKSRFGEQPVPVDSNIFEE--SSSLMQDYINSSG 173
N+PPK+P TNE+LT RK+L RSV+SKPKSRFGEQP P+D + EE +SS +QD I +
Sbjct: 59 NKPPKVPATNESLTPRKTLVRSVFSKPKSRFGEQPYPIDGTLLEENVTSSNLQDQI--AV 116
Query: 174 NSPMKNMXXXXXXXXXXXXXXXXFKETVRSVSITTPRTPLMASPXXXXXXXXXXXIYKKV 353
SP K TV S+ TPRTPLM SP IYKKV
Sbjct: 117 TSPYK-------ASRSPNNKHGTVYRTVSITSVVTPRTPLMTSP-GPAGEDPDEIIYKKV 168
Query: 354 SIRNKLKYKRVKIKALIE 407
+K K KR+ K LIE
Sbjct: 169 EF-SKGKRKRLTTKVLIE 185
Score = 72.8 bits (177), Expect = 7e-11
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +2
Query: 584 WFMHFVVLLIELNFLLRKKVLYFVHSLKKSAQVCLWLTLVLITWLSLFS 730
WF H VV LIE+NFLL+KKVLYFVH LKK QV W+ LVL+TW+ L +
Sbjct: 234 WFTHIVVFLIEMNFLLKKKVLYFVHGLKKCIQVFTWIALVLLTWVLLIN 282
>ref|XP_003526048.1| PREDICTED: uncharacterized protein At5g12080-like [Glycine max]
Length = 767
Score = 91.3 bits (225), Expect = 2e-16
Identities = 58/138 (42%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = +3
Query: 3 NRPPKIPT-NETLTRRKSLARSVYSKPKSRFGEQPVPVDSNIFEE-SSSLMQDYINSSGN 176
N+PPK+ T N LTRRKSL RSVYSKPKSRFGEQP P+D + E+ ++S +Q+ N +
Sbjct: 72 NKPPKVFTSNANLTRRKSLTRSVYSKPKSRFGEQPYPIDGTLLEDNANSTLQE--NLTVG 129
Query: 177 SPMKNMXXXXXXXXXXXXXXXXFKETVRSVSITTPRTPLMASPXXXXXXXXXXXIYKKVS 356
SP K T +S+ TP+TPLMASP IYKKV
Sbjct: 130 SPYK-------ASPNNNNKAGTVNRTFSILSVITPKTPLMASP-GPAGEDFDEIIYKKVE 181
Query: 357 IRNKLKYKRVKIKALIEW 410
+ + +R+ K L EW
Sbjct: 182 LSKNKRSRRLTAKMLFEW 199
Score = 72.4 bits (176), Expect = 9e-11
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +2
Query: 584 WFMHFVVLLIELNFLLRKKVLYFVHSLKKSAQVCLWLTLVLITWLSLFS 730
WFMH VV LIE NFLLRKKVLYFV+ LKK Q +WL LVL+TW+ L +
Sbjct: 247 WFMHIVVFLIETNFLLRKKVLYFVYGLKKCVQFFIWLGLVLLTWVLLIN 295
>emb|CAN70429.1| hypothetical protein VITISV_037531 [Vitis vinifera]
Length = 760
Score = 87.8 bits (216), Expect = 2e-15
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = +3
Query: 3 NRPPKIPTNETLTRRKSLARSVYSKPKSRFGEQPVPVDSNIFEESSSLMQDYINSSGNSP 182
++PPKIPT+E L RR+S+A+SVYS+ KSRFG+ PVD N FE ++ ++Q+ I S +
Sbjct: 69 HKPPKIPTSEALARRRSVAKSVYSRSKSRFGDP--PVDINYFENNNGILQEQIGGSSS-- 124
Query: 183 MKNMXXXXXXXXXXXXXXXXFKETVRSVSITTPRTPLMASPXXXXXXXXXXXIYKKVSIR 362
K R+VSI RTPLMASP IYK+V+
Sbjct: 125 -----------YRSYRASPGSKPGSRAVSI-NQRTPLMASP--GGVEDDDEEIYKRVNST 170
Query: 363 --NKLKYKRVKIKALIEW 410
NK K++RVK+K L+EW
Sbjct: 171 EWNKKKHRRVKVKVLVEW 188
Score = 76.6 bits (187), Expect = 5e-12
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +2
Query: 584 WFMHFVVLLIELNFLLRKKVLYFVHSLKKSAQVCLWLTLVLITWLSLF 727
W M+F+V LIE NFLL+KKVLYFVH LKKS QV +WL L+L+TW+ LF
Sbjct: 236 WIMNFIVFLIERNFLLKKKVLYFVHGLKKSVQVFIWLALILVTWVLLF 283