BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006479
         (4113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   128   1e-26
gb|AAD22330.1| putative non-LTR retroelement reverse transcripta...   124   2e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                121   2e-24
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   120   3e-24
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   110   4e-21

>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  128 bits (322), Expect = 1e-26
 Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 1/219 (0%)
 Frame = +1

Query: 3460 SPSQSAFVLERRIDDNILLAQELFRNYHKAYGQPRCAMKIDLRKALDSISWEFMLNALN* 3639
            +P+QSAF+ +R + +N+LLA EL ++YHK    PRCAMKIDL KA DS+ W F+LN L  
Sbjct: 825  APNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTLA- 883

Query: 3640 AIQISP*VYLLDKGLYYISFLLS*GEWLPLWLF*RGKGFTSRGSSLS-LSFCYCYEVPSI 3816
            A+ I       +K +++I+  +S         F        +G SLS   F  C  V S 
Sbjct: 884  ALDIP------EKFIHWINLCISTAS------FSVQVNGLRQGCSLSPYLFVICMNVLSA 931

Query: 3817 ILSMETRSHIFKHHWKTKSLSLSHLCFADDLLIFCHGDVDSIMVIKNCLDFFSTISGLHI 3996
            +L        F +H + +++ L+HLCFADD+++F  G   S+  +      F+  SGL+I
Sbjct: 932  MLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNI 991

Query: 3997 NGSKSMCFLSNVSSPLAAIIFNRLGFQVGKFSAKFLGVP 4113
            +  KS  F++++SS   A I  R  F  G    ++LG+P
Sbjct: 992  SLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLP 1030


>gb|AAD22330.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 631

 Score =  124 bits (312), Expect = 2e-25
 Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
 Frame = +1

Query: 3466 SQSAFVLERRIDDNILLAQELFRNYHKAYGQPRCAMKIDLRKALDSISWEFMLNALN*AI 3645
            +QSAFV ER + +N+LLA EL ++YHK    PRCAMKID+ KA DS+ W+F+LN L  A+
Sbjct: 131  NQSAFVKERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLE-AL 189

Query: 3646 QISP*VYLLDKGLYYISFLLS*GEWL-----PLWLF*RGKGFTSRGSSLS-LSFCYCYEV 3807
                     +K  ++I   +S   +       L  F   K    +G +LS   F  C  V
Sbjct: 190  NFP------EKIRHWIKLCISTATFSVQVNGELAGFFGNKRGLRQGCALSPYLFVICMNV 243

Query: 3808 PSIILSMETRSHIFKHHWKTKSLSLSHLCFADDLLIFCHGDVDSIMVIKNCLDFFSTISG 3987
             S ++          +H K K LSL+HLCF DDL++F  G   SI  + N    F+  SG
Sbjct: 244  LSHMIDEAAVRRNIGYHPKCKKLSLTHLCFVDDLMVFIDGQQRSIEGVINIFHEFAGKSG 303

Query: 3988 LHINGSKSMCFLSNVSSPLAAIIFNRLGFQVGKFSAKFLGVP 4113
            LHI+  KS  +L+ VS P    I +   F  G+   ++LG+P
Sbjct: 304  LHISLEKSTLYLAGVSEPNRDHILSAFSFASGQLPVRYLGLP 345


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  121 bits (303), Expect = 2e-24
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
 Frame = +1

Query: 3466 SQSAFVLERRIDDNILLAQELFRNYHKAYGQPRCAMKIDLRKALDSISWEFMLNALN*AI 3645
            +QSAFV ER + +N+LLA EL ++YHK    PRCAMKID+ KA DS+ W+F+LN L  A+
Sbjct: 134  NQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLE-AL 192

Query: 3646 QISP*VYLLDKGLYYISFLLS*GEWL-----PLWLF*RGKGFTSRGSSLS-LSFCYCYEV 3807
                     +   ++I   +S   +       L  F   K    +G +LS   F  C  V
Sbjct: 193  NFP------ENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICMNV 246

Query: 3808 PSIILSMETRSHIFKHHWKTKSLSLSHLCFADDLLIFCHGDVDSIMVIKNCLDFFSTISG 3987
             S ++ +        +H K K LSL+HLCFADDL++F  G   S+  + N    F+  SG
Sbjct: 247  LSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSG 306

Query: 3988 LHINGSKSMCFLSNVSSPLAAIIFNRLGFQVGKFSAKFLGVP 4113
            LHI+  KS  +L+ VS      I +   F  G+   ++LG+P
Sbjct: 307  LHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLP 348


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  120 bits (301), Expect = 3e-24
 Identities = 78/222 (35%), Positives = 114/222 (51%), Gaps = 6/222 (2%)
 Frame = +1

Query: 3466 SQSAFVLERRIDDNILLAQELFRNYHKAYGQPRCAMKIDLRKALDSISWEFMLNALN*AI 3645
            +QSAFV ER + +N+LLA EL ++YHK    PRCAMKID+ KA DS+ W+F+LN L  A+
Sbjct: 703  NQSAFVRERLLMENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLE-AL 761

Query: 3646 QISP*VYLLDKGLYYISFLLS*GEWL------PLWLF*RGKGFTSRGSSLSLSFCYCYEV 3807
            +        +K  ++I   +S   +           F   +G     +     F  C  V
Sbjct: 762  KFP------EKFRHWIKLCISTATFSVQVNSEQAGFFGSKRGLRQGCALSPYLFVICMNV 815

Query: 3808 PSIILSMETRSHIFKHHWKTKSLSLSHLCFADDLLIFCHGDVDSIMVIKNCLDFFSTISG 3987
             S ++ +        +H K K LSL+HLCFADDL++F  G   S+  + N    F+  SG
Sbjct: 816  LSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSG 875

Query: 3988 LHINGSKSMCFLSNVSSPLAAIIFNRLGFQVGKFSAKFLGVP 4113
            LHI+  KS  +L+ VS      I +   F  G+   ++LG P
Sbjct: 876  LHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFP 917


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  110 bits (274), Expect = 4e-21
 Identities = 78/225 (34%), Positives = 115/225 (51%), Gaps = 9/225 (4%)
 Frame = +1

Query: 3466 SQSAFVLERRIDDNILLAQELFRNYHKAYGQPRCAMKIDLRKALDSISWEFMLNALN*AI 3645
            +QSAFV ER + +N+LLA EL ++YHK    PRCAMKID+ KA DS+ W+F+LN L  A+
Sbjct: 858  NQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLE-AL 916

Query: 3646 QISP*VYLLDKGLYYISFLLS--------*GEWLPLWLF*RGKGFTSRGSSLS-LSFCYC 3798
                     +   ++I   +S         GE    +   RG     +G +LS   F  C
Sbjct: 917  NFP------ETFRHWIKLCISTATFSVQVNGELAGFFGSSRG---LRQGCALSPYLFVIC 967

Query: 3799 YEVPSIILSMETRSHIFKHHWKTKSLSLSHLCFADDLLIFCHGDVDSIMVIKNCLDFFST 3978
              V S ++          +H K + + L+HLCFADDL++F  G   SI  + N    F+ 
Sbjct: 968  MNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAG 1027

Query: 3979 ISGLHINGSKSMCFLSNVSSPLAAIIFNRLGFQVGKFSAKFLGVP 4113
             SGL I+  KS  +L+ VS+       +   F  G+   ++LG+P
Sbjct: 1028 RSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLP 1072