BLASTX nr result

ID: Panax21_contig00006467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006467
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus ...   231   1e-58
ref|XP_004147388.1| PREDICTED: U-box domain-containing protein 1...   229   6e-58
ref|XP_004161195.1| PREDICTED: U-box domain-containing protein 1...   228   1e-57
ref|XP_003531268.1| PREDICTED: U-box domain-containing protein 1...   225   9e-57
ref|XP_002305723.1| predicted protein [Populus trichocarpa] gi|2...   225   1e-56

>ref|XP_002522266.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538519|gb|EEF40124.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 719

 Score =  231 bits (590), Expect = 1e-58
 Identities = 113/155 (72%), Positives = 128/155 (82%)
 Frame = -2

Query: 706 QTYDRFSITRWMEEGHCTCPKTGQTLIHTRLVPNRALRNLIMQWCTAHGVPYNPPEGLNS 527
           QTYDR SI+RW+EEGHCTCPKTGQ LI+TR VPNRALRNLI+QWCTAHG+PY PPE  +S
Sbjct: 315 QTYDRSSISRWVEEGHCTCPKTGQMLINTRFVPNRALRNLIVQWCTAHGIPYEPPENTDS 374

Query: 526 SSENFXXXXXXXXXXXANKATSQLLIQQLANESHGSKTVAAREIRLLAKTGRENRAYIAE 347
           S+E F           AN+AT+ LLIQQLAN S  +KT AAREIRLLAKTG+ENRA+IAE
Sbjct: 375 SAEGFAAASPTKAAIEANRATATLLIQQLANGSQNAKTTAAREIRLLAKTGKENRAFIAE 434

Query: 346 AGAVPHLKALFSSPNAVAQENSVTVMLNLSIYEKN 242
           AGA+PHL+ L SSPN VAQENSVT MLNLSIY+KN
Sbjct: 435 AGAIPHLRNLLSSPNPVAQENSVTAMLNLSIYDKN 469


>ref|XP_004147388.1| PREDICTED: U-box domain-containing protein 17-like [Cucumis
           sativus]
          Length = 715

 Score =  229 bits (584), Expect = 6e-58
 Identities = 111/155 (71%), Positives = 131/155 (84%)
 Frame = -2

Query: 706 QTYDRFSITRWMEEGHCTCPKTGQTLIHTRLVPNRALRNLIMQWCTAHGVPYNPPEGLNS 527
           QTYDR SITRWMEEGH TCPKTGQ LIHTRL PNRALRNLI+QWC AHGVPY+PP+G+++
Sbjct: 311 QTYDRSSITRWMEEGHNTCPKTGQMLIHTRLAPNRALRNLIVQWCIAHGVPYDPPDGMDA 370

Query: 526 SSENFXXXXXXXXXXXANKATSQLLIQQLANESHGSKTVAAREIRLLAKTGRENRAYIAE 347
           SSE++           AN+AT+ +LIQQL+  S  +KT+AAREIRLLAKTG+ENRA+IAE
Sbjct: 371 SSESYAIASPTRAALEANRATAMILIQQLSIGSQDAKTIAAREIRLLAKTGKENRAFIAE 430

Query: 346 AGAVPHLKALFSSPNAVAQENSVTVMLNLSIYEKN 242
           AGA+PHL+ L +SPNAVAQENSVT MLNLSIY+KN
Sbjct: 431 AGAIPHLQKLLASPNAVAQENSVTAMLNLSIYDKN 465


>ref|XP_004161195.1| PREDICTED: U-box domain-containing protein 17-like [Cucumis
           sativus]
          Length = 715

 Score =  228 bits (581), Expect = 1e-57
 Identities = 110/155 (70%), Positives = 131/155 (84%)
 Frame = -2

Query: 706 QTYDRFSITRWMEEGHCTCPKTGQTLIHTRLVPNRALRNLIMQWCTAHGVPYNPPEGLNS 527
           QTYDR SITRWMEEGH TCPKTGQ LIHTRL PNRALRNLI+QWC AHGVPY+PP+G+++
Sbjct: 311 QTYDRSSITRWMEEGHNTCPKTGQMLIHTRLAPNRALRNLIVQWCIAHGVPYDPPDGMDA 370

Query: 526 SSENFXXXXXXXXXXXANKATSQLLIQQLANESHGSKTVAAREIRLLAKTGRENRAYIAE 347
           S+E++           AN+AT+ +LIQQL+  S  +KT+AAREIRLLAKTG+ENRA+IAE
Sbjct: 371 SAESYAIASPTRAALEANRATAMILIQQLSIGSQDAKTIAAREIRLLAKTGKENRAFIAE 430

Query: 346 AGAVPHLKALFSSPNAVAQENSVTVMLNLSIYEKN 242
           AGA+PHL+ L +SPNAVAQENSVT MLNLSIY+KN
Sbjct: 431 AGAIPHLQKLLASPNAVAQENSVTAMLNLSIYDKN 465


>ref|XP_003531268.1| PREDICTED: U-box domain-containing protein 17-like [Glycine max]
          Length = 715

 Score =  225 bits (574), Expect = 9e-57
 Identities = 110/155 (70%), Positives = 129/155 (83%)
 Frame = -2

Query: 706 QTYDRFSITRWMEEGHCTCPKTGQTLIHTRLVPNRALRNLIMQWCTAHGVPYNPPEGLNS 527
           QTYDR SI RWMEEGHCTCPKTG  + H RLVPNRALRNLIMQWC+AHGVPY+PPEG+++
Sbjct: 310 QTYDRRSIWRWMEEGHCTCPKTGLLVSHNRLVPNRALRNLIMQWCSAHGVPYDPPEGVDA 369

Query: 526 SSENFXXXXXXXXXXXANKATSQLLIQQLANESHGSKTVAAREIRLLAKTGRENRAYIAE 347
           S E F           AN+ T+ LLIQQLA+ SH +KTVAAREIRLLAKTG+ENRA+IA+
Sbjct: 370 SVEMFLSACPSKASLEANQGTATLLIQQLADGSHAAKTVAAREIRLLAKTGKENRAFIAQ 429

Query: 346 AGAVPHLKALFSSPNAVAQENSVTVMLNLSIYEKN 242
           AGA+PHL+ L SSP+AVAQENSVT +LNLSI+E+N
Sbjct: 430 AGAIPHLRNLLSSPSAVAQENSVTALLNLSIFERN 464


>ref|XP_002305723.1| predicted protein [Populus trichocarpa] gi|222848687|gb|EEE86234.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score =  225 bits (573), Expect = 1e-56
 Identities = 116/175 (66%), Positives = 134/175 (76%), Gaps = 9/175 (5%)
 Frame = -2

Query: 739 DEFCSSDLEVC---------QTYDRFSITRWMEEGHCTCPKTGQTLIHTRLVPNRALRNL 587
           D FC   L++          QTYDR SI+RWM+EGHCTCPKTGQ L++TRLVPNRALRNL
Sbjct: 293 DFFCPISLDLMRDPVIISTGQTYDRSSISRWMDEGHCTCPKTGQILMNTRLVPNRALRNL 352

Query: 586 IMQWCTAHGVPYNPPEGLNSSSENFXXXXXXXXXXXANKATSQLLIQQLANESHGSKTVA 407
           I+QWCTAHG+PY+PPE  +SS E F           AN+AT+ LLI QLAN S G+KTVA
Sbjct: 353 IVQWCTAHGIPYDPPENTDSSVEAFAATMPSKAAIEANRATATLLIHQLANGSQGAKTVA 412

Query: 406 AREIRLLAKTGRENRAYIAEAGAVPHLKALFSSPNAVAQENSVTVMLNLSIYEKN 242
           AR IRLLAKTGRENRA+IAEAGA+P+L  L SS N+VAQENSVT +LNLSIYEKN
Sbjct: 413 ARGIRLLAKTGRENRAFIAEAGAIPYLCELLSSTNSVAQENSVTAILNLSIYEKN 467


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