BLASTX nr result

ID: Panax21_contig00006465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006465
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40866.1| bHLH transcriptional factor [Coptis japonica]         256   5e-66
ref|XP_002529295.1| DNA binding protein, putative [Ricinus commu...   251   3e-64
emb|CBI23608.3| unnamed protein product [Vitis vinifera]              246   6e-63
ref|XP_003555760.1| PREDICTED: transcription factor bHLH104-like...   246   7e-63
ref|XP_002280987.2| PREDICTED: transcription factor bHLH104-like...   244   3e-62

>dbj|BAJ40866.1| bHLH transcriptional factor [Coptis japonica]
          Length = 219

 Score =  256 bits (655), Expect = 5e-66
 Identities = 134/226 (59%), Positives = 160/226 (70%), Gaps = 1/226 (0%)
 Frame = -2

Query: 912 MDSLDDNSCWDLIDYTTLIDDVASADFDWI-NQSAVPEFDYSLTSGAMSLGKECAEKECS 736
           M+S  ++S W+LIDYT L +D +S D  W  NQSA  E D S      + G    EK C+
Sbjct: 1   MNSFPEDSPWNLIDYTRLYEDPSSNDLLWCSNQSACTELDVS------AAGAGPVEKGCA 54

Query: 735 RKRGRNESCSRIGTKACXXXXXXXRLNDRFLELSSTLEPGRPATTDKSAILGDAIRVLNQ 556
           +KRGRNESC  +G+KAC       +LNDRF +LSS LEPGRPA TDKSAIL DAIRVLNQ
Sbjct: 55  KKRGRNESCGGLGSKACREKMRRDKLNDRFADLSSALEPGRPAKTDKSAILSDAIRVLNQ 114

Query: 555 LKTESQEYRELNEKLQEEIRSLKAEKNELRKEKLALKADKTRMEQQLKTMRVSPAGCMPA 376
           L+TESQE +E NEKLQE+I++LKAEKNELR+EK  LKADK R+EQQ+K M + P G +P 
Sbjct: 115 LRTESQELKEANEKLQEDIKNLKAEKNELREEKNLLKADKERIEQQMKAMAIVPGGIVPP 174

Query: 375 HPAAAYQAGPNNMPVFPSYSFVPMWHYLPPSARDTSHDHELRPPAA 238
           HP A YQAG N    FPSY   PMW Y+PP++ DTS DH LRPP A
Sbjct: 175 HP-ATYQAGVNKFMAFPSYGGYPMWQYIPPASLDTSQDHVLRPPVA 219


>ref|XP_002529295.1| DNA binding protein, putative [Ricinus communis]
           gi|223531219|gb|EEF33064.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  251 bits (640), Expect = 3e-64
 Identities = 133/226 (58%), Positives = 161/226 (71%), Gaps = 1/226 (0%)
 Frame = -2

Query: 912 MDSLDDNSCWDLIDYTTLIDDVASADFDWINQSA-VPEFDYSLTSGAMSLGKECAEKECS 736
           MDSL++ SCWD +DY+ + +   S+D  W N +  + E D+S + GA+S      EK+CS
Sbjct: 1   MDSLEEGSCWDFLDYSFIEETTTSSDLLWPNSNNNLSEIDFSSSGGAVS-----EEKQCS 55

Query: 735 RKRGRNESCSRIGTKACXXXXXXXRLNDRFLELSSTLEPGRPATTDKSAILGDAIRVLNQ 556
           RKR R +SCS+  TKAC       RLNDRF +LSS LEP RPA TDK ++L DAIRVLNQ
Sbjct: 56  RKRARGDSCSKPVTKACREKLRRERLNDRFQDLSSVLEPERPARTDKPSLLDDAIRVLNQ 115

Query: 555 LKTESQEYRELNEKLQEEIRSLKAEKNELRKEKLALKADKTRMEQQLKTMRVSPAGCMPA 376
           LKTE+QE +E NEKL EEI+ LKAEKNELR+EKL LKADK R EQQLK M V P G MPA
Sbjct: 116 LKTEAQELKETNEKLLEEIKCLKAEKNELREEKLTLKADKERTEQQLKIMAVRPPGYMPA 175

Query: 375 HPAAAYQAGPNNMPVFPSYSFVPMWHYLPPSARDTSHDHELRPPAA 238
           HP AAY A  N M ++PS+  +PMW  LPP+A+DTS DHE  PPAA
Sbjct: 176 HP-AAYHAAMNKMAIYPSFGLIPMWQ-LPPAAQDTSKDHEYWPPAA 219


>emb|CBI23608.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score =  246 bits (629), Expect = 6e-63
 Identities = 132/225 (58%), Positives = 155/225 (68%)
 Frame = -2

Query: 912 MDSLDDNSCWDLIDYTTLIDDVASADFDWINQSAVPEFDYSLTSGAMSLGKECAEKECSR 733
           MDS DD++ WD +++  LIDDV S D  WIN  A  + D S    A        E E  +
Sbjct: 32  MDSFDDDT-WDFLNHK-LIDDVTSNDLSWINDGAGVDIDLSRICAASQ------ENEGRQ 83

Query: 732 KRGRNESCSRIGTKACXXXXXXXRLNDRFLELSSTLEPGRPATTDKSAILGDAIRVLNQL 553
           KRGRN+S +R GTKAC       RLNDRFL+LSS LEPG+ A TDK AILGDAIRVLNQL
Sbjct: 84  KRGRNDSSTRPGTKACREKLRRERLNDRFLDLSSILEPGKSAKTDKLAILGDAIRVLNQL 143

Query: 552 KTESQEYRELNEKLQEEIRSLKAEKNELRKEKLALKADKTRMEQQLKTMRVSPAGCMPAH 373
           + E+++  + NEKLQEEIRSLKAEKNELR+EKL LKADK R+EQQ+K +    AG  P +
Sbjct: 144 RNEAKDLEDANEKLQEEIRSLKAEKNELREEKLLLKADKERIEQQMKAISAPAAGFWPTY 203

Query: 372 PAAAYQAGPNNMPVFPSYSFVPMWHYLPPSARDTSHDHELRPPAA 238
           PAA +  G N   VFPSY   PMW Y+P SA DTSHDHELRPPAA
Sbjct: 204 PAATHHTGANKSAVFPSYGLFPMWQYIPSSALDTSHDHELRPPAA 248


>ref|XP_003555760.1| PREDICTED: transcription factor bHLH104-like [Glycine max]
          Length = 220

 Score =  246 bits (628), Expect = 7e-63
 Identities = 129/228 (56%), Positives = 161/228 (70%), Gaps = 3/228 (1%)
 Frame = -2

Query: 912 MDSLDDNSCWDLIDYTTLIDDVASADFDWINQSAVPEFDYSLTSGAMSLGKECAEKECSR 733
           MDSL+D+ CWD +DY+ +  D A  DF W N +     +  +   A++       +E ++
Sbjct: 1   MDSLEDSGCWDFLDYSFI--DQAPPDFLWSNNNNSVSTEIDIPGDAVAC------QENTK 52

Query: 732 KRGRNESCSRIGTKACXXXXXXXRLNDRFLELSSTLEPGRPATTDKSAILGDAIRVLNQL 553
           KRGR +SC + G+KAC       RLN+RF +LSS LEPGRP  TDK AIL DAIRVL+QL
Sbjct: 53  KRGRTDSCFKAGSKACREKLRRERLNERFCDLSSVLEPGRPVRTDKPAILDDAIRVLSQL 112

Query: 552 KTESQEYRELNEKLQEEIRSLKAEKNELRKEKLALKADKTRMEQQLKTMRVSPAGCMP-- 379
           KTE+QE ++ NEKL EEI+ LKAEKNELR+EKL LKADK R+E+QLK + V+PAG M   
Sbjct: 113 KTEAQELKKTNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKALPVAPAGFMAPP 172

Query: 378 -AHPAAAYQAGPNNMPVFPSYSFVPMWHYLPPSARDTSHDHELRPPAA 238
            A  AAAYQAG N M V+P+Y ++PMW YLP S RDTSHDHELRPPAA
Sbjct: 173 VAAAAAAYQAGVNKMAVYPNYGYIPMWQYLPQSVRDTSHDHELRPPAA 220


>ref|XP_002280987.2| PREDICTED: transcription factor bHLH104-like [Vitis vinifera]
          Length = 219

 Score =  244 bits (623), Expect = 3e-62
 Identities = 132/228 (57%), Positives = 157/228 (68%), Gaps = 3/228 (1%)
 Frame = -2

Query: 912 MDSLDDNSCWDLIDYTTLIDDVASADFDWINQSAVPEFDYSLTSGAMSLGKECA---EKE 742
           MDS DD++ WD +++  LIDDV S D  WIN   +   D       + L + CA   E E
Sbjct: 1   MDSFDDDT-WDFLNHK-LIDDVTSNDLSWINDGYLAGVD-------IDLSRICAASQENE 51

Query: 741 CSRKRGRNESCSRIGTKACXXXXXXXRLNDRFLELSSTLEPGRPATTDKSAILGDAIRVL 562
             +KRGRN+S +R GTKAC       RLNDRFL+LSS LEPG+ A TDK AILGDAIRVL
Sbjct: 52  GRQKRGRNDSSTRPGTKACREKLRRERLNDRFLDLSSILEPGKSAKTDKLAILGDAIRVL 111

Query: 561 NQLKTESQEYRELNEKLQEEIRSLKAEKNELRKEKLALKADKTRMEQQLKTMRVSPAGCM 382
           NQL+ E+++  + NEKLQEEIRSLKAEKNELR+EKL LKADK R+EQQ+K +    AG  
Sbjct: 112 NQLRNEAKDLEDANEKLQEEIRSLKAEKNELREEKLLLKADKERIEQQMKAISAPAAGFW 171

Query: 381 PAHPAAAYQAGPNNMPVFPSYSFVPMWHYLPPSARDTSHDHELRPPAA 238
           P +PAA +  G N   VFPSY   PMW Y+P SA DTSHDHELRPPAA
Sbjct: 172 PTYPAATHHTGANKSAVFPSYGLFPMWQYIPSSALDTSHDHELRPPAA 219


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