BLASTX nr result

ID: Panax21_contig00006463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006463
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   121   2e-25
gb|AFK40203.1| unknown [Lotus japonicus]                              119   6e-25
ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycin...   117   4e-24
ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...   115   1e-23
ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycin...   113   4e-23

>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  121 bits (303), Expect = 2e-25
 Identities = 58/77 (75%), Positives = 67/77 (87%)
 Frame = -1

Query: 772 ESDDDIVVCEISKNRRVSVRNWQGKVVVDIREFYVKDGKQLPGRKGNQGINGISLTMDQW 593
           +  D+I+VCEIS+NRRVSVRNWQGKV VDIREFYVKDGKQ+PG+K      GISLTMDQW
Sbjct: 32  DDPDNIIVCEISRNRRVSVRNWQGKVQVDIREFYVKDGKQMPGKK------GISLTMDQW 85

Query: 592 NVLRDHVDEIDKAVVDS 542
           NVLRDHV+EID+AV D+
Sbjct: 86  NVLRDHVNEIDEAVADN 102


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  119 bits (299), Expect = 6e-25
 Identities = 58/77 (75%), Positives = 66/77 (85%)
 Frame = -1

Query: 772 ESDDDIVVCEISKNRRVSVRNWQGKVVVDIREFYVKDGKQLPGRKGNQGINGISLTMDQW 593
           E  D IVVCEISKNRRVSVRNWQG++VVDI EFYVKDGKQ+PG+K      GISLTMDQW
Sbjct: 35  EDPDSIVVCEISKNRRVSVRNWQGRIVVDILEFYVKDGKQMPGKK------GISLTMDQW 88

Query: 592 NVLRDHVDEIDKAVVDS 542
           NVLR+H++EIDKAV +S
Sbjct: 89  NVLRNHIEEIDKAVNES 105


>ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
           gi|255637253|gb|ACU18957.1| unknown [Glycine max]
          Length = 105

 Score =  117 bits (292), Expect = 4e-24
 Identities = 57/81 (70%), Positives = 69/81 (85%), Gaps = 3/81 (3%)
 Frame = -1

Query: 772 ESDDD---IVVCEISKNRRVSVRNWQGKVVVDIREFYVKDGKQLPGRKGNQGINGISLTM 602
           +SDDD   + +CEISKNRRV+VRNW+G ++VDIREFYVKDGKQLPGRK      GISLTM
Sbjct: 31  DSDDDPDSVTICEISKNRRVAVRNWKGSIMVDIREFYVKDGKQLPGRK------GISLTM 84

Query: 601 DQWNVLRDHVDEIDKAVVDSN 539
           DQWNVLR+HV+EIDKAV +++
Sbjct: 85  DQWNVLRNHVEEIDKAVNENS 105


>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score =  115 bits (288), Expect = 1e-23
 Identities = 55/80 (68%), Positives = 68/80 (85%)
 Frame = -1

Query: 772 ESDDDIVVCEISKNRRVSVRNWQGKVVVDIREFYVKDGKQLPGRKGNQGINGISLTMDQW 593
           +  D+IVVCE+SKNRRV VRNWQGK+VVDIREFYVKDGKQ+PG+K      GISL++DQW
Sbjct: 30  DDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKK------GISLSLDQW 83

Query: 592 NVLRDHVDEIDKAVVDSN*G 533
           NVL +HV+EIDKAV +++ G
Sbjct: 84  NVLLNHVEEIDKAVNENSSG 103


>ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycine max]
           gi|255627821|gb|ACU14255.1| unknown [Glycine max]
          Length = 105

 Score =  113 bits (283), Expect = 4e-23
 Identities = 56/81 (69%), Positives = 68/81 (83%), Gaps = 3/81 (3%)
 Frame = -1

Query: 772 ESDDD---IVVCEISKNRRVSVRNWQGKVVVDIREFYVKDGKQLPGRKGNQGINGISLTM 602
           +SDDD   I VCEI KNRRV+VRNW+G ++VDIREFYV+DGKQLPGRK      GISLTM
Sbjct: 31  DSDDDPDSITVCEILKNRRVAVRNWKGSIMVDIREFYVEDGKQLPGRK------GISLTM 84

Query: 601 DQWNVLRDHVDEIDKAVVDSN 539
           DQWNVLR+HV+EIDKA+ +++
Sbjct: 85  DQWNVLRNHVEEIDKAINENS 105


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