BLASTX nr result

ID: Panax21_contig00006441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006441
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   293   9e-77
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   243   8e-62
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   233   1e-58
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...   228   4e-57
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   203   1e-49

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  293 bits (749), Expect = 9e-77
 Identities = 199/453 (43%), Positives = 244/453 (53%), Gaps = 31/453 (6%)
 Frame = -1

Query: 1355 GSRFAGSPKFQSHLTDMKLGFGDXXXXXXXXXXXXXXXH----FSPIPTWNTDYLRXXXX 1188
            GSR     KFQSHLTDMKLGFGD                    FSP+P WN+D       
Sbjct: 1905 GSRLGAPMKFQSHLTDMKLGFGDLASSLPHFDPSHRLGLQNDHFSPVPHWNSDKFPTNFV 1964

Query: 1187 XXXXXXXSHRPGTS-NTHMEQPFXXXXXXXXXXXXXXXXXXXSFDLQKLEDDQHASRSWK 1011
                   S RPGTS N HMEQPF                   SFDL + ED+  A++  K
Sbjct: 1965 RDSSSGPSDRPGTSSNIHMEQPFLLNSFGTSSLGSLGLTSSSSFDLLQKEDELGATKYGK 2024

Query: 1010 LPSFLD----------NKIGSGVSTNAALFTDSNKGQNVSQSKGKEVAGTSSSNNKLPHW 861
            LPS LD          N +G+G ST++ L  D NKG ++S SKGKEV G+S S NKLPHW
Sbjct: 2025 LPSLLDRSLNLLRDSHNNMGAGESTSSGLMPDPNKGLSLSNSKGKEVEGSSPSKNKLPHW 2084

Query: 860  LQEAVSVPAKPEYPGLPPTVSAIAQSVRLLYGYDNXXXXXXXXXXXXXXXXXXPXXXXXX 681
            L+EAVS P+KP  P LPPTVSAIAQSVRLLYG +                   P      
Sbjct: 2085 LREAVSAPSKPPDPELPPTVSAIAQSVRLLYGEEKPTIPPFVAPGPPPSLPKDPRLNLKK 2144

Query: 680  XXXXXXRTVQQFPRNDIAG--HNFQSSLRGDNIGXXXXXXXXXXXXXXPQSIPGTSGFPW 507
                    V +    D+AG   NFQSSL G+N                PQ+  G SG PW
Sbjct: 2145 KKRRSH--VLRRLSGDVAGTSWNFQSSLHGENFA-SSSVPLAPPFPLLPQNTAGASGLPW 2201

Query: 506  LEPDLNMPPSSVNMLNPSSTSVHSNPEKKRNTGMSPSPEVIQLVASCVAPSP--PDT--- 342
            +EP+LN+PP ++NM+NPSS+S    P+KK +TG+SPSPEV+QLVASCVAP P  P     
Sbjct: 2202 IEPNLNLPPLNINMMNPSSSSSFLKPQKK-STGLSPSPEVLQLVASCVAPGPHIPPVPGM 2260

Query: 341  -SSNFIESKXXXXXXXXXXXXND---ACGEQKDKQSSPVNMFSH-TELKADQTESRD-SS 180
             SS F++SK             D   A G QK KQ+S +++ +   + + +Q ES D SS
Sbjct: 2261 PSSGFLDSKLPLPKFIDRGEFPDSTGASGNQKGKQTSTLSVHAPLNQERREQIESGDSSS 2320

Query: 179  KTQSEPN---LPNAEEISSEGTLSDHQASDREP 90
            KTQS+P+    PN EEISSEGT+SDH+ SD EP
Sbjct: 2321 KTQSDPSHAEHPNVEEISSEGTVSDHRVSDHEP 2353


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score =  243 bits (620), Expect = 8e-62
 Identities = 175/451 (38%), Positives = 222/451 (49%), Gaps = 29/451 (6%)
 Frame = -1

Query: 1355 GSRFAGSPKFQSHLTDMKLGFGDXXXXXXXXXXXXXXXH----FSPIPTWNTDYLRXXXX 1188
            GSR     KFQSHLTDMKLGFGD                    F PIPTWN+D LR    
Sbjct: 1898 GSRLVTPSKFQSHLTDMKLGFGDLSSSLPHLEPLDQFSLQNEHFGPIPTWNSDELRVSFV 1957

Query: 1187 XXXXXXXSHRPGTSNTHMEQPFXXXXXXXXXXXXXXXXXXXSFDLQKLEDDQHASRSWKL 1008
                       G S+   E+PF                   +FDLQ+ E++ +  +  K 
Sbjct: 1958 GDSSM------GPSHVSSEKPFLLNSFGASTLATLGLNSSSNFDLQRREEEYNTMKYGKS 2011

Query: 1007 PSFLD----------NKIGSGVSTNAALFTDSNKGQNVSQSKGKEVAGTSSSNNKLPHWL 858
            PS LD          N +GSG  +++ALF D NK  N   SKGKEV G+SSSN KLPHWL
Sbjct: 2012 PSLLDRSLHILHDSHNNVGSGELSSSALFLDPNKVLNPFHSKGKEVVGSSSSN-KLPHWL 2070

Query: 857  QEAVSVP-AKPEYPGLPPTVSAIAQSVRLLYGYDNXXXXXXXXXXXXXXXXXXPXXXXXX 681
            +EAVS P  KP  P LPPTVSAIAQSVR+LYG +                   P      
Sbjct: 2071 REAVSAPPVKPAIPDLPPTVSAIAQSVRVLYGENQPTIPPFIVPGPPPSQPKDPRRILRK 2130

Query: 680  XXXXXXRTVQQFPRNDIAG--HNFQSSLRGDNIGXXXXXXXXXXXXXXPQSIPGTSGFPW 507
                     +QFP  DI G   +F++S+ G N+                  +  TSG PW
Sbjct: 2131 KKKRRSHMFRQFPL-DIGGSSQDFRNSIHGSNVASTSIPQVPPL-------VHETSG-PW 2181

Query: 506  LEPDLNMPPSSVNMLNPSSTSVHSNPEKKRNTGMSPSPEVIQLVASCVAPSP------PD 345
             E D N+P  S++ +N  ++S + N +KK   G+SPSPEV+QLVASCVAP P        
Sbjct: 2182 NESDFNLPLPSLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVASCVAPGPHLSSGSGA 2241

Query: 344  TSSNFIESKXXXXXXXXXXXXNDACG---EQKDKQSSPVNMFSHTELKADQTESRDSSKT 174
            TS++  ESK            +D  G   E  D + SP  +    E + DQ +S DSSKT
Sbjct: 2242 TSASLHESKVPLPKSPDQVGISDPLGALEEPMDTERSPPQVQCIPEKRLDQPDSGDSSKT 2301

Query: 173  QSEPN---LPNAEEISSEGTLSDHQASDREP 90
            +S+ +    P+ E+ISSEGTLSDH  SD+EP
Sbjct: 2302 ESDLSPIKQPDVEDISSEGTLSDHPVSDQEP 2332


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  233 bits (593), Expect = 1e-58
 Identities = 178/451 (39%), Positives = 218/451 (48%), Gaps = 30/451 (6%)
 Frame = -1

Query: 1355 GSRFAGSPKF-QSHLTDMKLGFGDXXXXXXXXXXXXXXXH----FSPIPTWNTDYLRXXX 1191
            GSR    PKF Q+HLTDMKLGFGD                    F  +PTWN +  R   
Sbjct: 1815 GSRLVAPPKFHQAHLTDMKLGFGDLPPSLPHFEVPDQIGFQNEHFGSMPTWNPERFRRNF 1874

Query: 1190 XXXXXXXXSHRPGTSNTHMEQPFXXXXXXXXXXXXXXXXXXXSFDLQKLEDDQHASRSWK 1011
                       P TSN+ M  PF                   SFD    ED+ +A++  K
Sbjct: 1875 TGDSSAG----PSTSNSEM--PFLLNSLGSSNLGSLGFNSFSSFDSHHREDEHNATKYGK 1928

Query: 1010 LPSFLD----------NKIGSGVSTNAALFTDSNKGQNVSQSKGKEVAGTSSSNNKLPHW 861
            LPS LD          N +G+G S+ +ALF + NK  N S SKGKEV G+SSS NKLPHW
Sbjct: 1929 LPSLLDRSLNLACDSQNNVGNGESSGSALFPEPNKRLNNSHSKGKEVVGSSSSKNKLPHW 1988

Query: 860  LQEAVSVPAKPEYPGLPPTVSAIAQSVRLLYGYDNXXXXXXXXXXXXXXXXXXPXXXXXX 681
            L+EAVS PAKP  P LPPTVSAIAQSVR+LYG +                   P      
Sbjct: 1989 LREAVSSPAKPPEPDLPPTVSAIAQSVRVLYGENKPTIPPFVIPGPPPSQPKDPRRILRK 2048

Query: 680  XXXXXXRTVQQFPRNDIAG--HNFQSSLRGDNIGXXXXXXXXXXXXXXPQSIPGTSGFPW 507
                     +QFP  D AG   NF+SS+ G NI                   PGTSG   
Sbjct: 2049 KKKRRSHMFRQFPL-DTAGSMQNFRSSILGSNIASSSIPPAPTFQPLQLLP-PGTSGHTR 2106

Query: 506  LEPDLNMPPSSVNMLNPSSTSVHSNPEKKRNTGMSPSPEVIQLVASCVAPSP------PD 345
             + D N    +++M+N S TS +S   KK + G+SPSPEV+QLVA+CVAP P        
Sbjct: 2107 NDSDPNEHFRNLDMIN-SLTSSYSKLPKKTSMGLSPSPEVLQLVAACVAPGPHLSSSSGM 2165

Query: 344  TSSNFIESKXXXXXXXXXXXXNDACG-EQKDKQSS---PVNMFSHTELKADQTESRDSSK 177
            TSS+F+ESK            +DA G E+KDK      P       E K  Q +  DSSK
Sbjct: 2166 TSSSFLESKLPLPKSVDEVGVSDAQGAEEKDKDMQGLPPDTQIILPEEKPGQPDDGDSSK 2225

Query: 176  T---QSEPNLPNAEEISSEGTLSDHQASDRE 93
            +    S+   P+ EEISSEGT+SDH  S+ E
Sbjct: 2226 SGTNNSQTEKPDVEEISSEGTVSDHLVSEHE 2256


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score =  228 bits (580), Expect = 4e-57
 Identities = 164/439 (37%), Positives = 209/439 (47%), Gaps = 25/439 (5%)
 Frame = -1

Query: 1331 KFQSHLTDMKLGFGDXXXXXXXXXXXXXXXH----FSPIPTWNTDYLRXXXXXXXXXXXS 1164
            KFQSHLTDMKLGFGD                    FSPIPTWN D L+            
Sbjct: 1905 KFQSHLTDMKLGFGDLSSSLPHFEPLDQLSLRNEHFSPIPTWNPDELQANFVGDSSAGP- 1963

Query: 1163 HRPGTSNTHMEQPFXXXXXXXXXXXXXXXXXXXSFDLQKLEDDQHASRSWKLPSFLD--- 993
                + +   E+PF                   SFDLQ+ E++    +  KLPS LD   
Sbjct: 1964 ----SLHVSSEKPFLLSSFGASNLATLGLNSSTSFDLQRREEEYETMKYGKLPSLLDKSV 2019

Query: 992  -------NKIGSGVSTNAALFTDSNKGQNVSQSKGKEVAGTSSSNNKLPHWLQEAVSVPA 834
                   N +G G  +N+ LF   +K  N   SKGKEV G+SSSN KLPHWL+EAV+ P 
Sbjct: 2020 HISRDSQNNVGIGELSNSGLFLHPSKFLNPINSKGKEVVGSSSSN-KLPHWLREAVTAPV 2078

Query: 833  KPEYPGLPPTVSAIAQSVRLLYGYDNXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXRTV 654
            KP  P LPPTVSAIAQSVR+LYG +                   P               
Sbjct: 2079 KPPEPELPPTVSAIAQSVRVLYGENQPTIPPFVIPGPPPSQPKDPRWILRKKKKRRSHMF 2138

Query: 653  QQFPRNDIAG--HNFQSSLRGDNIGXXXXXXXXXXXXXXPQSIPGTSGFPWLEPDLNMPP 480
            +QFP  D  G   +F+  + G N+                  +P TSG PW E DLN+P 
Sbjct: 2139 RQFPL-DTGGSTQDFRYGIHGCNVASTSIPPPL---------VPETSGRPWNESDLNLPL 2188

Query: 479  SSVNMLNPSSTSVHSNPEKKRNTGMSPSPEVIQLVASCVAPSP------PDTSSNFIESK 318
             S++ +N  ++S + N +KK   G+SPSPEV+QLVASCVAP P        TSS+  ESK
Sbjct: 2189 PSLSKMNSLTSSAYLNVQKKTTMGLSPSPEVLQLVASCVAPGPHLTSGSGTTSSSIHESK 2248

Query: 317  XXXXXXXXXXXXNDACGEQKDKQSSPVNMFSHTELKADQTESRDSSKTQSE---PNLPNA 147
                        +D+      ++  P       E + DQ +S DSSKT+S+      P+ 
Sbjct: 2249 VPMRKSPDQVGMSDSQVALDTERLPPQVQSMLPEKRPDQPDSGDSSKTESDFSPIKKPDV 2308

Query: 146  EEISSEGTLSDHQASDREP 90
            E+ISSEGT+SDH  SD EP
Sbjct: 2309 EDISSEGTVSDHPLSDHEP 2327


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  203 bits (516), Expect = 1e-49
 Identities = 158/448 (35%), Positives = 213/448 (47%), Gaps = 27/448 (6%)
 Frame = -1

Query: 1355 GSRFAGSPKFQSHLTDMKLGFGDXXXXXXXXXXXXXXXH----FSPIPTWNTDYLRXXXX 1188
            GS+F   PKFQ+HLTDMKLG GD                    F P+P+W+ D  R    
Sbjct: 1888 GSKFLLPPKFQNHLTDMKLGIGDSASSLSHFSTLDRPSLQNDHFIPLPSWSYDKNRSKFP 1947

Query: 1187 XXXXXXXSHRPGTSNTHM-EQPFXXXXXXXXXXXXXXXXXXXSFDLQKLEDDQHASRSWK 1011
                   + RPGTS++ + E+PF                   S D  + ED Q  S+  K
Sbjct: 1948 EGAPAETTDRPGTSSSVLTERPFLLNSFGTSTLGSLGLNCSGSIDAHQKEDGQGNSKRGK 2007

Query: 1010 LPSFLDNK----------IGSGVSTNAALFTDSNKGQNVSQSKGKEVAGTSSSNNKLPHW 861
            LP   D            +G+G ST++ L ++ ++  ++  SKG+EV G+S+S +KLPHW
Sbjct: 2008 LPVLFDGSSNDVRDNCVNVGNGESTSSGLLSNPSR-PDLLHSKGEEVGGSSTSKDKLPHW 2066

Query: 860  LQEAVSVPAKPEYPGLPPTVSAIAQSVRLLYGYDNXXXXXXXXXXXXXXXXXXPXXXXXX 681
            L+EAVS PAK   P LPPTVSAIAQSVRLLYG D                   P      
Sbjct: 2067 LREAVSSPAKLPDPELPPTVSAIAQSVRLLYGEDKPTIPPFVIPGPPPSLPKDPRCSVKK 2126

Query: 680  XXXXXXRTVQQFPRN--DIAGHNFQSSLRGDNIGXXXXXXXXXXXXXXPQSIPGTSGFPW 507
                      +F R   D AG N +   R  ++                 S  G  G   
Sbjct: 2127 KKKRRS---HKFSRGLPDFAG-NSRDLHRSHHVDNGASSSLPLGPSLPLLSHTGALGTQQ 2182

Query: 506  LEPDLNMPPSSVNMLNPSSTSVHSNPEKKRNTGMSPSPEVIQLVASCVAPSPPDTS---- 339
            +E DLN+PP ++ + + S +S      KK ++G+SPSPEV+QLVASCVAP P   S    
Sbjct: 2183 IESDLNLPPLNLKVASSSHSS------KKASSGLSPSPEVLQLVASCVAPGPHLPSITGA 2236

Query: 338  SNFIESKXXXXXXXXXXXXNDACGEQKDK---QSSPVNMFSHTELKADQTESRDSSKTQS 168
            SNF++SK             D+ G  ++K   Q SP       E +    +S DSSKTQS
Sbjct: 2237 SNFLDSKLPLPRPVGRAKFKDSEGAFRNKNPRQVSPKIWCPPQEQEVHDLDSGDSSKTQS 2296

Query: 167  EPN---LPNAEEISSEGTLSDHQASDRE 93
            +P+    P+  E+SSEGT+SDH   D+E
Sbjct: 2297 DPSRVERPDEVEVSSEGTVSDHAVRDQE 2324


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