BLASTX nr result
ID: Panax21_contig00006416
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00006416 (1029 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53261.1| JMS10C05.4 [Jatropha curcas] 296 e-119 ref|XP_002283552.1| PREDICTED: GTP-binding protein TypA/BipA hom... 295 e-118 ref|XP_002529621.1| GTP-binding protein typa/bipa, putative [Ric... 295 e-117 ref|NP_568289.3| elongation factor family protein [Arabidopsis t... 290 e-116 ref|XP_002871578.1| elongation factor family protein [Arabidopsi... 290 e-116 >dbj|BAJ53261.1| JMS10C05.4 [Jatropha curcas] Length = 677 Score = 296 bits (757), Expect(2) = e-119 Identities = 160/230 (69%), Positives = 167/230 (72%) Frame = -1 Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG Sbjct: 114 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG---------- 163 Query: 849 XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670 EVER+LNMVEGVLLVVDSVEGPMPQTRFVLKKAL+FGHAVVVV Sbjct: 164 -----------------EVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALQFGHAVVVV 206 Query: 669 VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490 VNKIDRPSARP++VINSTFELFIELNA+DEQCDFQ Sbjct: 207 VNKIDRPSARPDYVINSTFELFIELNATDEQCDFQV------------IYASGIQGKAGL 254 Query: 489 XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340 GPLFE++IRCIPGPRIDKDGALQML TN EYDEHKGRIAIG Sbjct: 255 SPDDLAEDLGPLFESVIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIG 304 Score = 159 bits (401), Expect(2) = e-119 Identities = 77/85 (90%), Positives = 81/85 (95%) Frame = -3 Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77 RLHAGVL KGMDVRVCTSED CR++RVSELFVYEKF RVPAE+VEAGDICAVCGI DIQI Sbjct: 305 RLHAGVLRKGMDVRVCTSEDFCRYARVSELFVYEKFIRVPAESVEAGDICAVCGIDDIQI 364 Query: 76 GETIADKVSGKPLPAIKVEEPTVKM 2 GETIADKVSGKPLP+IKVEEPTVKM Sbjct: 365 GETIADKVSGKPLPSIKVEEPTVKM 389 >ref|XP_002283552.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis vinifera] gi|297739681|emb|CBI29863.3| unnamed protein product [Vitis vinifera] Length = 675 Score = 295 bits (755), Expect(2) = e-118 Identities = 161/230 (70%), Positives = 167/230 (72%) Frame = -1 Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850 DNQFVQERIMDSNDLERERGITILSKNTSI YKDTKINIIDTPGHSDFGG Sbjct: 112 DNQFVQERIMDSNDLERERGITILSKNTSIGYKDTKINIIDTPGHSDFGG---------- 161 Query: 849 XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670 EVER+LNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV Sbjct: 162 -----------------EVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 204 Query: 669 VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490 VNKIDRPSARP++VIN+TFELFIELNA+DEQCDFQA Sbjct: 205 VNKIDRPSARPDYVINATFELFIELNATDEQCDFQA------------IYASGIKGKAGL 252 Query: 489 XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340 GPLFE+IIRCIPGPRIDKDGALQML TN EYDEHKGRIAIG Sbjct: 253 SPENLADDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIG 302 Score = 158 bits (400), Expect(2) = e-118 Identities = 77/85 (90%), Positives = 81/85 (95%) Frame = -3 Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77 R+HAGVL KGMDVRVCT+EDACR++RVSELFVYEKF RVPAETVEAGDICAVCGI DIQI Sbjct: 303 RVHAGVLQKGMDVRVCTTEDACRYARVSELFVYEKFSRVPAETVEAGDICAVCGIDDIQI 362 Query: 76 GETIADKVSGKPLPAIKVEEPTVKM 2 GETIADK SGKPLPAIKVEEPTVKM Sbjct: 363 GETIADKSSGKPLPAIKVEEPTVKM 387 >ref|XP_002529621.1| GTP-binding protein typa/bipa, putative [Ricinus communis] gi|223530906|gb|EEF32766.1| GTP-binding protein typa/bipa, putative [Ricinus communis] Length = 703 Score = 295 bits (756), Expect(2) = e-117 Identities = 161/230 (70%), Positives = 167/230 (72%) Frame = -1 Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG Sbjct: 114 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG---------- 163 Query: 849 XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670 EVER+LNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV Sbjct: 164 -----------------EVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 206 Query: 669 VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490 VNKIDRPSARP++VINSTFELFIELNA+DEQCDFQ Sbjct: 207 VNKIDRPSARPDYVINSTFELFIELNATDEQCDFQV------------IYASGVQGKAGL 254 Query: 489 XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340 GPLFE+IIRCIPGP I+KDGALQMLVTN EYDEHKGRIAIG Sbjct: 255 SADDLADDLGPLFESIIRCIPGPHIEKDGALQMLVTNIEYDEHKGRIAIG 304 Score = 154 bits (389), Expect(2) = e-117 Identities = 73/85 (85%), Positives = 81/85 (95%) Frame = -3 Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77 RLHAGVL KGMDVRVCTSED+CR++RVSELFVY+KF R PAE+VEAGDICAVCGI D+QI Sbjct: 305 RLHAGVLRKGMDVRVCTSEDSCRYARVSELFVYDKFSRSPAESVEAGDICAVCGIDDVQI 364 Query: 76 GETIADKVSGKPLPAIKVEEPTVKM 2 GETIADK+SGKPLP+IKVEEPTVKM Sbjct: 365 GETIADKLSGKPLPSIKVEEPTVKM 389 >ref|NP_568289.3| elongation factor family protein [Arabidopsis thaliana] gi|332004540|gb|AED91923.1| elongation factor family protein [Arabidopsis thaliana] Length = 676 Score = 290 bits (741), Expect(2) = e-116 Identities = 157/230 (68%), Positives = 165/230 (71%) Frame = -1 Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850 DNQ +QERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGG Sbjct: 112 DNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGG---------- 161 Query: 849 XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670 EVERVLNMV+GVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV Sbjct: 162 -----------------EVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 204 Query: 669 VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490 VNKIDRPSARPEFV+NSTFELFIELNA+DEQCDFQA Sbjct: 205 VNKIDRPSARPEFVVNSTFELFIELNATDEQCDFQA------------IYASGIKGKAGL 252 Query: 489 XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340 GPLFE IIRC+PGP I+KDGALQML TN EYDEHKGRIAIG Sbjct: 253 SPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIG 302 Score = 155 bits (392), Expect(2) = e-116 Identities = 74/85 (87%), Positives = 80/85 (94%) Frame = -3 Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77 RLHAGVL KGMDVRVCTSED+CRF+RVSELFVYEKF+RVP ++VEAGDICAVCGI +IQI Sbjct: 303 RLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVEAGDICAVCGIDNIQI 362 Query: 76 GETIADKVSGKPLPAIKVEEPTVKM 2 GETIADKV GKPLP IKVEEPTVKM Sbjct: 363 GETIADKVHGKPLPTIKVEEPTVKM 387 >ref|XP_002871578.1| elongation factor family protein [Arabidopsis lyrata subsp. lyrata] gi|297317415|gb|EFH47837.1| elongation factor family protein [Arabidopsis lyrata subsp. lyrata] Length = 675 Score = 290 bits (741), Expect(2) = e-116 Identities = 157/230 (68%), Positives = 165/230 (71%) Frame = -1 Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850 DNQ +QERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGG Sbjct: 111 DNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGG---------- 160 Query: 849 XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670 EVERVLNMV+GVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV Sbjct: 161 -----------------EVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 203 Query: 669 VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490 VNKIDRPSARPEFV+NSTFELFIELNA+DEQCDFQA Sbjct: 204 VNKIDRPSARPEFVVNSTFELFIELNATDEQCDFQA------------IYASGIKGKAGL 251 Query: 489 XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340 GPLFE IIRC+PGP I+KDGALQML TN EYDEHKGRIAIG Sbjct: 252 SPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIG 301 Score = 155 bits (392), Expect(2) = e-116 Identities = 74/85 (87%), Positives = 80/85 (94%) Frame = -3 Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77 RLHAGVL KGMDVRVCTSED+CRF+RVSELFVYEKF+RVP ++VEAGDICAVCGI +IQI Sbjct: 302 RLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVEAGDICAVCGIDNIQI 361 Query: 76 GETIADKVSGKPLPAIKVEEPTVKM 2 GETIADKV GKPLP IKVEEPTVKM Sbjct: 362 GETIADKVHGKPLPTIKVEEPTVKM 386