BLASTX nr result

ID: Panax21_contig00006416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00006416
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53261.1| JMS10C05.4 [Jatropha curcas]                          296   e-119
ref|XP_002283552.1| PREDICTED: GTP-binding protein TypA/BipA hom...   295   e-118
ref|XP_002529621.1| GTP-binding protein typa/bipa, putative [Ric...   295   e-117
ref|NP_568289.3| elongation factor family protein [Arabidopsis t...   290   e-116
ref|XP_002871578.1| elongation factor family protein [Arabidopsi...   290   e-116

>dbj|BAJ53261.1| JMS10C05.4 [Jatropha curcas]
          Length = 677

 Score =  296 bits (757), Expect(2) = e-119
 Identities = 160/230 (69%), Positives = 167/230 (72%)
 Frame = -1

Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850
            DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG          
Sbjct: 114  DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG---------- 163

Query: 849  XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670
                             EVER+LNMVEGVLLVVDSVEGPMPQTRFVLKKAL+FGHAVVVV
Sbjct: 164  -----------------EVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALQFGHAVVVV 206

Query: 669  VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490
            VNKIDRPSARP++VINSTFELFIELNA+DEQCDFQ                         
Sbjct: 207  VNKIDRPSARPDYVINSTFELFIELNATDEQCDFQV------------IYASGIQGKAGL 254

Query: 489  XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340
                     GPLFE++IRCIPGPRIDKDGALQML TN EYDEHKGRIAIG
Sbjct: 255  SPDDLAEDLGPLFESVIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIG 304



 Score =  159 bits (401), Expect(2) = e-119
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = -3

Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77
           RLHAGVL KGMDVRVCTSED CR++RVSELFVYEKF RVPAE+VEAGDICAVCGI DIQI
Sbjct: 305 RLHAGVLRKGMDVRVCTSEDFCRYARVSELFVYEKFIRVPAESVEAGDICAVCGIDDIQI 364

Query: 76  GETIADKVSGKPLPAIKVEEPTVKM 2
           GETIADKVSGKPLP+IKVEEPTVKM
Sbjct: 365 GETIADKVSGKPLPSIKVEEPTVKM 389


>ref|XP_002283552.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
            vinifera] gi|297739681|emb|CBI29863.3| unnamed protein
            product [Vitis vinifera]
          Length = 675

 Score =  295 bits (755), Expect(2) = e-118
 Identities = 161/230 (70%), Positives = 167/230 (72%)
 Frame = -1

Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850
            DNQFVQERIMDSNDLERERGITILSKNTSI YKDTKINIIDTPGHSDFGG          
Sbjct: 112  DNQFVQERIMDSNDLERERGITILSKNTSIGYKDTKINIIDTPGHSDFGG---------- 161

Query: 849  XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670
                             EVER+LNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV
Sbjct: 162  -----------------EVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 204

Query: 669  VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490
            VNKIDRPSARP++VIN+TFELFIELNA+DEQCDFQA                        
Sbjct: 205  VNKIDRPSARPDYVINATFELFIELNATDEQCDFQA------------IYASGIKGKAGL 252

Query: 489  XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340
                     GPLFE+IIRCIPGPRIDKDGALQML TN EYDEHKGRIAIG
Sbjct: 253  SPENLADDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIAIG 302



 Score =  158 bits (400), Expect(2) = e-118
 Identities = 77/85 (90%), Positives = 81/85 (95%)
 Frame = -3

Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77
           R+HAGVL KGMDVRVCT+EDACR++RVSELFVYEKF RVPAETVEAGDICAVCGI DIQI
Sbjct: 303 RVHAGVLQKGMDVRVCTTEDACRYARVSELFVYEKFSRVPAETVEAGDICAVCGIDDIQI 362

Query: 76  GETIADKVSGKPLPAIKVEEPTVKM 2
           GETIADK SGKPLPAIKVEEPTVKM
Sbjct: 363 GETIADKSSGKPLPAIKVEEPTVKM 387


>ref|XP_002529621.1| GTP-binding protein typa/bipa, putative [Ricinus communis]
            gi|223530906|gb|EEF32766.1| GTP-binding protein
            typa/bipa, putative [Ricinus communis]
          Length = 703

 Score =  295 bits (756), Expect(2) = e-117
 Identities = 161/230 (70%), Positives = 167/230 (72%)
 Frame = -1

Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850
            DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG          
Sbjct: 114  DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGG---------- 163

Query: 849  XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670
                             EVER+LNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV
Sbjct: 164  -----------------EVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 206

Query: 669  VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490
            VNKIDRPSARP++VINSTFELFIELNA+DEQCDFQ                         
Sbjct: 207  VNKIDRPSARPDYVINSTFELFIELNATDEQCDFQV------------IYASGVQGKAGL 254

Query: 489  XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340
                     GPLFE+IIRCIPGP I+KDGALQMLVTN EYDEHKGRIAIG
Sbjct: 255  SADDLADDLGPLFESIIRCIPGPHIEKDGALQMLVTNIEYDEHKGRIAIG 304



 Score =  154 bits (389), Expect(2) = e-117
 Identities = 73/85 (85%), Positives = 81/85 (95%)
 Frame = -3

Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77
           RLHAGVL KGMDVRVCTSED+CR++RVSELFVY+KF R PAE+VEAGDICAVCGI D+QI
Sbjct: 305 RLHAGVLRKGMDVRVCTSEDSCRYARVSELFVYDKFSRSPAESVEAGDICAVCGIDDVQI 364

Query: 76  GETIADKVSGKPLPAIKVEEPTVKM 2
           GETIADK+SGKPLP+IKVEEPTVKM
Sbjct: 365 GETIADKLSGKPLPSIKVEEPTVKM 389


>ref|NP_568289.3| elongation factor family protein [Arabidopsis thaliana]
            gi|332004540|gb|AED91923.1| elongation factor family
            protein [Arabidopsis thaliana]
          Length = 676

 Score =  290 bits (741), Expect(2) = e-116
 Identities = 157/230 (68%), Positives = 165/230 (71%)
 Frame = -1

Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850
            DNQ +QERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGG          
Sbjct: 112  DNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGG---------- 161

Query: 849  XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670
                             EVERVLNMV+GVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV
Sbjct: 162  -----------------EVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 204

Query: 669  VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490
            VNKIDRPSARPEFV+NSTFELFIELNA+DEQCDFQA                        
Sbjct: 205  VNKIDRPSARPEFVVNSTFELFIELNATDEQCDFQA------------IYASGIKGKAGL 252

Query: 489  XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340
                     GPLFE IIRC+PGP I+KDGALQML TN EYDEHKGRIAIG
Sbjct: 253  SPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIG 302



 Score =  155 bits (392), Expect(2) = e-116
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -3

Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77
           RLHAGVL KGMDVRVCTSED+CRF+RVSELFVYEKF+RVP ++VEAGDICAVCGI +IQI
Sbjct: 303 RLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVEAGDICAVCGIDNIQI 362

Query: 76  GETIADKVSGKPLPAIKVEEPTVKM 2
           GETIADKV GKPLP IKVEEPTVKM
Sbjct: 363 GETIADKVHGKPLPTIKVEEPTVKM 387


>ref|XP_002871578.1| elongation factor family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317415|gb|EFH47837.1| elongation factor family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 675

 Score =  290 bits (741), Expect(2) = e-116
 Identities = 157/230 (68%), Positives = 165/230 (71%)
 Frame = -1

Query: 1029 DNQFVQERIMDSNDLERERGITILSKNTSITYKDTKINIIDTPGHSDFGGXXXXXXXXXX 850
            DNQ +QERIMDSNDLERERGITILSKNTSITYK+TK+NIIDTPGHSDFGG          
Sbjct: 111  DNQVMQERIMDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGG---------- 160

Query: 849  XXXXXXXXXXXXXXXXXEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 670
                             EVERVLNMV+GVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV
Sbjct: 161  -----------------EVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVV 203

Query: 669  VNKIDRPSARPEFVINSTFELFIELNASDEQCDFQAXXXXXXXXXXXXXXXXXXXXXXXX 490
            VNKIDRPSARPEFV+NSTFELFIELNA+DEQCDFQA                        
Sbjct: 204  VNKIDRPSARPEFVVNSTFELFIELNATDEQCDFQA------------IYASGIKGKAGL 251

Query: 489  XXXXXXXXXGPLFETIIRCIPGPRIDKDGALQMLVTNTEYDEHKGRIAIG 340
                     GPLFE IIRC+PGP I+KDGALQML TN EYDEHKGRIAIG
Sbjct: 252  SPDDLAEDLGPLFEAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIG 301



 Score =  155 bits (392), Expect(2) = e-116
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -3

Query: 256 RLHAGVLNKGMDVRVCTSEDACRFSRVSELFVYEKFFRVPAETVEAGDICAVCGIGDIQI 77
           RLHAGVL KGMDVRVCTSED+CRF+RVSELFVYEKF+RVP ++VEAGDICAVCGI +IQI
Sbjct: 302 RLHAGVLRKGMDVRVCTSEDSCRFARVSELFVYEKFYRVPTDSVEAGDICAVCGIDNIQI 361

Query: 76  GETIADKVSGKPLPAIKVEEPTVKM 2
           GETIADKV GKPLP IKVEEPTVKM
Sbjct: 362 GETIADKVHGKPLPTIKVEEPTVKM 386


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